Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu11g1607 ATGGCGGTCACCTCTTCCCCTCGCGAGGAGTATGTTTACATGGCCAAGCTTGCCGAGCAAGCTGAGCGCTATGAGGAGATGGTCGAGTTTATGGAGAAGGTCTCCGCCGCTACAGACAACGAGGAGCTCACCGTCGAGGAGCGGAACCTTCTCTCTGTTGCTTACAAGAATGTTATTGGAGCGCGTAGAGCCTCCTGGAGGATTATTTCCTCCATTGAACAGAAGGAGGAGAGCCGAGGGAATGATGATCATGTCTCCGTTATCCGAGAATACAGATCCAAGATCGAGACTGAGCTCTCCAACATCTGTGATGGGATCCTTAAGCTTCTTGACTCCCGTCTCATTTCCTCTGCTGCTTCTGGTGACTCCAAGGTGTTTTATCTCAAGATGAAGGGAGATTATCATAGATACCTTGCTGAATTCAAGACCGGAGCCGAGCGGAAGGAAGCTGCCGAAAGTACTCTCACTGCTTATAAATCTGCACAGGATATTGCAAATGCTGAACTTGCTCCTACTCACCCCATACGACTTGGGCTGGCTTTGAACTTCTCAGTGTTCTATTATGAGATTCTGAATTCCCCTGATCGTGCTTGCAGCCTTGCTAAACAGGCATTCGATGAAGCAATTGCTGAGTTGGATACACTGGGCGAGGAATCATACAAAGATAGCACTTTGATCATGCAACTTCTTCGTGACAACCTCACTCTATGGACTTCGGACATGCAGGATGATGGAGATGAGATTAAAGAAGCAGCTCCCAAACGTGACGATGAATAG 777 48.26 MAVTSSPREEYVYMAKLAEQAERYEEMVEFMEKVSAATDNEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSVIREYRSKIETELSNICDGILKLLDSRLISSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGDEIKEAAPKRDDE 258
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 27240050 27242053 + ClG42_11g0160700.10 Clacu11g1607 262484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu11g1607 258 PIRSF 14-3-3 2 250 IPR000308 -
Clacu11g1607 258 SMART 1433_4 8 250 IPR023410 -
Clacu11g1607 258 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Clacu11g1607 258 FunFam 14-3-3 protein epsilon 4 251 - -
Clacu11g1607 258 Coils Coil 14 34 - -
Clacu11g1607 258 Pfam 14-3-3 protein 14 238 IPR023410 -
Clacu11g1607 258 Gene3D - 1 252 IPR036815 -
Clacu11g1607 258 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Clacu11g1607 258 PANTHER 14-3-3 PROTEIN 8 243 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Clacu11g1607 258 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
Clacu11g1607 258 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Clacu11g1607 258 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Clacu11g1607 258 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Clacu11g1607 258 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Clacu11g1607 258 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Clacu11g1607 258 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu07g1632 Clacu-Chr7:30890091 Clacu11g1607 Clacu-Chr11:27240050 2.90E-117 dispersed
Clacu08g1338 Clacu-Chr8:23406850 Clacu11g1607 Clacu-Chr11:27240050 1.40E-100 dispersed
Clacu11g1597 Clacu-Chr11:27133711 Clacu11g1607 Clacu-Chr11:27240050 6.50E-90 dispersed
Clacu11g1607 Clacu-Chr11:27240050 Clacu11g1631 Clacu-Chr11:27454631 2.90E-101 dispersed
Clacu11g1607 Clacu-Chr11:27240050 Clacu08g1281 Clacu-Chr8:22750550 3.90E-130 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu11g1607 K06630 - csv:101210822 494.967