Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu11g1607 | ATGGCGGTCACCTCTTCCCCTCGCGAGGAGTATGTTTACATGGCCAAGCTTGCCGAGCAAGCTGAGCGCTATGAGGAGATGGTCGAGTTTATGGAGAAGGTCTCCGCCGCTACAGACAACGAGGAGCTCACCGTCGAGGAGCGGAACCTTCTCTCTGTTGCTTACAAGAATGTTATTGGAGCGCGTAGAGCCTCCTGGAGGATTATTTCCTCCATTGAACAGAAGGAGGAGAGCCGAGGGAATGATGATCATGTCTCCGTTATCCGAGAATACAGATCCAAGATCGAGACTGAGCTCTCCAACATCTGTGATGGGATCCTTAAGCTTCTTGACTCCCGTCTCATTTCCTCTGCTGCTTCTGGTGACTCCAAGGTGTTTTATCTCAAGATGAAGGGAGATTATCATAGATACCTTGCTGAATTCAAGACCGGAGCCGAGCGGAAGGAAGCTGCCGAAAGTACTCTCACTGCTTATAAATCTGCACAGGATATTGCAAATGCTGAACTTGCTCCTACTCACCCCATACGACTTGGGCTGGCTTTGAACTTCTCAGTGTTCTATTATGAGATTCTGAATTCCCCTGATCGTGCTTGCAGCCTTGCTAAACAGGCATTCGATGAAGCAATTGCTGAGTTGGATACACTGGGCGAGGAATCATACAAAGATAGCACTTTGATCATGCAACTTCTTCGTGACAACCTCACTCTATGGACTTCGGACATGCAGGATGATGGAGATGAGATTAAAGAAGCAGCTCCCAAACGTGACGATGAATAG | 777 | 48.26 | MAVTSSPREEYVYMAKLAEQAERYEEMVEFMEKVSAATDNEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSVIREYRSKIETELSNICDGILKLLDSRLISSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGDEIKEAAPKRDDE | 258 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 27240050 | 27242053 | + | ClG42_11g0160700.10 | Clacu11g1607 | 262484 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu11g1607 | 258 | PIRSF | 14-3-3 | 2 | 250 | IPR000308 | - | |
Clacu11g1607 | 258 | SMART | 1433_4 | 8 | 250 | IPR023410 | - | |
Clacu11g1607 | 258 | ProSitePatterns | 14-3-3 proteins signature 1. | 48 | 58 | IPR023409 | - | |
Clacu11g1607 | 258 | FunFam | 14-3-3 protein epsilon | 4 | 251 | - | - | |
Clacu11g1607 | 258 | Coils | Coil | 14 | 34 | - | - | |
Clacu11g1607 | 258 | Pfam | 14-3-3 protein | 14 | 238 | IPR023410 | - | |
Clacu11g1607 | 258 | Gene3D | - | 1 | 252 | IPR036815 | - | |
Clacu11g1607 | 258 | ProSitePatterns | 14-3-3 proteins signature 2. | 220 | 239 | IPR023409 | - | |
Clacu11g1607 | 258 | PANTHER | 14-3-3 PROTEIN | 8 | 243 | IPR000308 | GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER) | |
Clacu11g1607 | 258 | SUPERFAMILY | 14-3-3 protein | 7 | 240 | IPR036815 | - | |
Clacu11g1607 | 258 | PRINTS | 14-3-3 protein zeta signature | 157 | 183 | IPR000308 | - | |
Clacu11g1607 | 258 | PRINTS | 14-3-3 protein zeta signature | 211 | 240 | IPR000308 | - | |
Clacu11g1607 | 258 | PRINTS | 14-3-3 protein zeta signature | 42 | 71 | IPR000308 | - | |
Clacu11g1607 | 258 | PRINTS | 14-3-3 protein zeta signature | 122 | 144 | IPR000308 | - | |
Clacu11g1607 | 258 | PRINTS | 14-3-3 protein zeta signature | 184 | 210 | IPR000308 | - | |
Clacu11g1607 | 258 | PRINTS | 14-3-3 protein zeta signature | 91 | 115 | IPR000308 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu07g1632 | Clacu-Chr7:30890091 | Clacu11g1607 | Clacu-Chr11:27240050 | 2.90E-117 | dispersed | |
Clacu08g1338 | Clacu-Chr8:23406850 | Clacu11g1607 | Clacu-Chr11:27240050 | 1.40E-100 | dispersed | |
Clacu11g1597 | Clacu-Chr11:27133711 | Clacu11g1607 | Clacu-Chr11:27240050 | 6.50E-90 | dispersed | |
Clacu11g1607 | Clacu-Chr11:27240050 | Clacu11g1631 | Clacu-Chr11:27454631 | 2.90E-101 | dispersed | |
Clacu11g1607 | Clacu-Chr11:27240050 | Clacu08g1281 | Clacu-Chr8:22750550 | 3.90E-130 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu11g1607 | K06630 | - | csv:101210822 | 494.967 |