Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu11g1631 | ATGGCGTCCGCCATCCCTGAAAACCTAACAAGGGAGCAGTATGTTTACCTTTCGAAGCTTTCCGAGCAAGCCGAGCGCTACGAGGAAATGGTTCAGTTCATGCAGAAGCTTGTACTGAGCTCCACTCCAGCCTCGGAGCTCACTGTCGAGGAGCGCAATCTCCTTTCCGTCGCATACAAAAATGTGATCGGTTCTCTCCGCGCGGCTTGGCGTATCGTATCCTCAATTGAACAGAAGGAAGAAGGAAGGAAGAACGAAGATCACGTTGTCCTTGTCAAGGATTACAGATCCAAGGTCGAGTCCGAGCTCACCGACGTCTGCGCCAGTATTTTGAAGCTGTTGGACTCCAATCTGATACCATCCTCATCCTCTGGTGAATCTAAGGTGTTCTACTTAAAGATGAAGGGAGATTACCATAGGTACCTGGCGGAGTTTAAGATCGGGGAGGAGAGGAAGTCCGCCGCCGAGGATACCATGCTAGCTTACAAGGCTGCTCAGGATATTGCAGCTGCCGATCTTGCACCAACGCATCCAATCAGGCTGGGCCTAGCACTAAATTTCTCTGTTTTTTACTTTGAGATCCTGAACCAGCCTGACAAAGCCTGTAGCATGGCCAAACAGGCATTTGAAGAAGCCATTGCGGAATTGGACACATTAGGTGAAGAATCATACAAGGATAGCACTCTAATCATGCAGCTCTTAAGAGACAATCTCACCCTTTGGACTTCTGATACACAGATTATCGGTCGGAGTTTGATTCCTTCTAGGGTTTCTCTGAGTTCTCTCTCGTCTCATGGAGGACTTCGCTTTTCACGATGGCAACGTCTGCGGTTTGCTCGAGAGCAGGCACATCAACTTTCGTCAAGATCCTACCTATGGTTTGCAGATGCACTCGTCATTCATCCAAAGACTCTCCCAGGAAAAGGAACTGGAGTGGCCTGGAATTCTAGTGGTTCGCTTTTGATATCTGGATCAGATGACACCCGGATAAACATCTGGAGCTATTCTGGTCGAAAACTATTGCACTCTGTGGATACTGGGCATTCTGCAAACATATTTTGTACAAAATTTGTTCCTGAAACGTCTGATGAGCTTGTGGTCTCAGGAGCTGGGGATGCAGAGGTGCGCTTGTTTAATTTATCTCGCTTACGTGGGAGAGGACAAGATGATAATCCCATATCTTCATCGGCTTTGTATCAGTGTCACACCAGAAGAGTAAAAAAATTAGCTGTTGAAATAGGGAATCCAAATGTAGTATGGAGTGCTAGTGAGGATGGGACTCTTAGACAGCATGATTTTCGAGAGGGCATGTCTTGTCCTCCTGACGGAGCTTCTCACCAAGAATGCCACAATGTTCTTCTTGATTTGCGGTGTGGAGCTAGGAGGTCATTGGCTGATCCTCCCAGACAAACCCTTGCTTTGAAATCCTGTGACGTTAGTTCCACTAGGCCTCATTTACTTCTGGTTGGTGGAAGTGATGCATTTGCACGGTTATATGATAGAAGGATGCTGCCGCCCTTGTCTTCCAGCCAGAAGAGGATGTCACCACCTCCCTGTGTTAACTACTTCTGTCCAATGCATCTCTCTGATCGGGTCCGATCGGGTTTGCATTTGACTCATGTTACTTTTAGTCCGAATGGAGAAGAGATTCTGCTTAGCTATAGTGGAGAACATGCATACTTGATGAATGTAAATCATGCTGGCCTAAGTACAATGCAGTATACATCAGGAGATGTTTCTAAGTTAATGAGCTTCACTCCTGTACTCAACGGATTGGAATTGCAGCATCCGGTTTCCAATCTATCTAATGGTTTGCCTTTAAATTGTGGTGTTAATGCAAAGCTTGATAAATGCAGAAAATTATTACAAATAGCTGAAAAATGCTTGGACGGTGGGAACTACTTTGGTGGAATAGAGGCATGCAATGAAATTTTGGATGGATATGGTCGTAATATTGGTGTTATTTTCAAGCACGATACATTATGCACACGTGCTGCCTTATTACTCAAGCGGAAGTGGAAGAATGATGTTCATATGGCCATAAGAGATTGTTATAGTGCTAGGAAAATGGATCATTCCTCTTTCAGAGCACATTACTACATGTGCGAAGCTCTATCGCAGCTGGGTAGACATAAGGAAGCCCTAGATTTTGCATTTGCTGCTCAGTGTTTAGCCCCATCTAACCCTGAAGTGGCAGAGAAGGTGGAAAGTGTAAAGAGGGAACTCGCAGCAGCTGAACTGGAAAAATCAAATAAAGGCAATGATGGAGCTCTAAGATCAGCACCGTTAGGTGGTGTATTATCATTAAGTGACTTTCTTTACCGCTCAGATGCAAATAGTGATGTTTCACAAGATGGGCTGAGATCAGAAAGAGAAGATTCTGATTATGATGAGGAGGTGGAGCTGGACTTTGAAACCTTATCAGGTGATGAAGCCCATGATGTCGATTCCAACGTTCTACATGGAAGTTTAAATCTTAGAATACATAGACGAGTTGATCCAGCAAGAGAAAGGGTTGGCCCAAATGGCTCCTGTGGGTCTCCTTCATCATCACAAAATGATGCAACACTTTATCAGCCGGAACCCGTCATTGATATGAAGCAAAGATATGTAGGTCATTGTAACATCGGAACTGATATTAAACAAGCCAGTTTTCTCGGCCAAAGAGGTGAATACGTTGCCAGTGGTAGCGATGATGGTAGATGGTTTATTTGGGAAAAGGGAACTGGTAGACTGATTAAAATACTTGTTGGAGATGGAGCTGTTGTGAATTGTGTTCAAAGTCATCCATTTGATTGTGCCATCGCTACTAGCGGGATCGACAATACCATAAAGCTATGGACTCCAACTGATCCAGTCCCGTCACTCATAGCCGGTGGAGCGGTCGGACCGCAGGCAGCCGACGTGTTGGCTGTAATAGAGAATAATCAGCGCAGACTCTGCCGTAATAGAGAAGCCATACTGCCTTTTGAAATTTTAGAGCGAGTTGATATTATAGTTTTTGTTTATATGGATTCGCGAAGAAATTGGAATAGTCATAGTTGGCGAGTAGCAGTCAGCACACCGAACACATCGTTCAACAGACTCATACGAGTTGAGTCAGGTTATGGGAAGCCTCATTCAAGTTCTCGATATATAACATTTAACAGTCAAGCTACTATTTCTATGGGTGTTATTTAA | 3180 | 44.65 | MASAIPENLTREQYVYLSKLSEQAERYEEMVQFMQKLVLSSTPASELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEDHVVLVKDYRSKVESELTDVCASILKLLDSNLIPSSSSGESKVFYLKMKGDYHRYLAEFKIGEERKSAAEDTMLAYKAAQDIAAADLAPTHPIRLGLALNFSVFYFEILNQPDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDTQIIGRSLIPSRVSLSSLSSHGGLRFSRWQRLRFAREQAHQLSSRSYLWFADALVIHPKTLPGKGTGVAWNSSGSLLISGSDDTRINIWSYSGRKLLHSVDTGHSANIFCTKFVPETSDELVVSGAGDAEVRLFNLSRLRGRGQDDNPISSSALYQCHTRRVKKLAVEIGNPNVVWSASEDGTLRQHDFREGMSCPPDGASHQECHNVLLDLRCGARRSLADPPRQTLALKSCDVSSTRPHLLLVGGSDAFARLYDRRMLPPLSSSQKRMSPPPCVNYFCPMHLSDRVRSGLHLTHVTFSPNGEEILLSYSGEHAYLMNVNHAGLSTMQYTSGDVSKLMSFTPVLNGLELQHPVSNLSNGLPLNCGVNAKLDKCRKLLQIAEKCLDGGNYFGGIEACNEILDGYGRNIGVIFKHDTLCTRAALLLKRKWKNDVHMAIRDCYSARKMDHSSFRAHYYMCEALSQLGRHKEALDFAFAAQCLAPSNPEVAEKVESVKRELAAAELEKSNKGNDGALRSAPLGGVLSLSDFLYRSDANSDVSQDGLRSEREDSDYDEEVELDFETLSGDEAHDVDSNVLHGSLNLRIHRRVDPARERVGPNGSCGSPSSSQNDATLYQPEPVIDMKQRYVGHCNIGTDIKQASFLGQRGEYVASGSDDGRWFIWEKGTGRLIKILVGDGAVVNCVQSHPFDCAIATSGIDNTIKLWTPTDPVPSLIAGGAVGPQAADVLAVIENNQRRLCRNREAILPFEILERVDIIVFVYMDSRRNWNSHSWRVAVSTPNTSFNRLIRVESGYGKPHSSSRYITFNSQATISMGVI | 1059 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 27454631 | 27474306 | - | ClG42_11g0163100.10 | Clacu11g1631 | 262508 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu11g1631 | 1059 | FunFam | Transducin family protein / WD-40 repeat family protein | 817 | 991 | - | - | |
Clacu11g1631 | 1059 | SMART | WD40_4 | 392 | 432 | IPR001680 | GO:0005515(InterPro) | |
Clacu11g1631 | 1059 | SMART | WD40_4 | 863 | 906 | IPR001680 | GO:0005515(InterPro) | |
Clacu11g1631 | 1059 | SMART | WD40_4 | 298 | 334 | IPR001680 | GO:0005515(InterPro) | |
Clacu11g1631 | 1059 | SMART | WD40_4 | 337 | 379 | IPR001680 | GO:0005515(InterPro) | |
Clacu11g1631 | 1059 | SMART | WD40_4 | 909 | 948 | IPR001680 | GO:0005515(InterPro) | |
Clacu11g1631 | 1059 | SMART | WD40_4 | 460 | 500 | IPR001680 | GO:0005515(InterPro) | |
Clacu11g1631 | 1059 | SUPERFAMILY | TPR-like | 615 | 734 | IPR011990 | GO:0005515(InterPro) | |
Clacu11g1631 | 1059 | MobiDBLite | consensus disorder prediction | 779 | 798 | - | - | |
Clacu11g1631 | 1059 | Pfam | 14-3-3 protein | 18 | 242 | IPR023410 | - | |
Clacu11g1631 | 1059 | Gene3D | - | 303 | 590 | IPR015943 | GO:0005515(InterPro) | |
Clacu11g1631 | 1059 | Gene3D | - | 2 | 250 | IPR036815 | - | |
Clacu11g1631 | 1059 | SMART | 1433_4 | 11 | 255 | IPR023410 | - | |
Clacu11g1631 | 1059 | PANTHER | WD REPEAT DOMAIN-CONTAINING FAMILY | 312 | 996 | IPR045151 | GO:0005737(PANTHER)|GO:0045717(PANTHER)|GO:0080008(PANTHER) | |
Clacu11g1631 | 1059 | Gene3D | Tetratricopeptide repeat domain | 610 | 758 | IPR011990 | GO:0005515(InterPro) | |
Clacu11g1631 | 1059 | MobiDBLite | consensus disorder prediction | 831 | 856 | - | - | |
Clacu11g1631 | 1059 | SUPERFAMILY | WD40 repeat-like | 309 | 947 | IPR036322 | GO:0005515(InterPro) | |
Clacu11g1631 | 1059 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 916 | 947 | IPR001680 | GO:0005515(InterPro) | |
Clacu11g1631 | 1059 | ProSitePatterns | 14-3-3 proteins signature 1. | 52 | 62 | IPR023409 | - | |
Clacu11g1631 | 1059 | Coils | Coil | 728 | 755 | - | - | |
Clacu11g1631 | 1059 | ProSitePatterns | 14-3-3 proteins signature 2. | 224 | 243 | IPR023409 | - | |
Clacu11g1631 | 1059 | SUPERFAMILY | 14-3-3 protein | 10 | 244 | IPR036815 | - | |
Clacu11g1631 | 1059 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 312 | 343 | IPR001680 | GO:0005515(InterPro) | |
Clacu11g1631 | 1059 | Coils | Coil | 17 | 37 | - | - | |
Clacu11g1631 | 1059 | Gene3D | - | 865 | 992 | IPR015943 | GO:0005515(InterPro) | |
Clacu11g1631 | 1059 | PRINTS | 14-3-3 protein zeta signature | 95 | 119 | IPR000308 | - | |
Clacu11g1631 | 1059 | PRINTS | 14-3-3 protein zeta signature | 161 | 187 | IPR000308 | - | |
Clacu11g1631 | 1059 | PRINTS | 14-3-3 protein zeta signature | 46 | 75 | IPR000308 | - | |
Clacu11g1631 | 1059 | PRINTS | 14-3-3 protein zeta signature | 126 | 148 | IPR000308 | - | |
Clacu11g1631 | 1059 | PRINTS | 14-3-3 protein zeta signature | 188 | 214 | IPR000308 | - | |
Clacu11g1631 | 1059 | PRINTS | 14-3-3 protein zeta signature | 215 | 244 | IPR000308 | - | |
Clacu11g1631 | 1059 | FunFam | 14-3-3 protein epsilon | 8 | 251 | - | - | |
Clacu11g1631 | 1059 | Pfam | WD domain, G-beta repeat | 911 | 947 | IPR001680 | GO:0005515(InterPro) | |
Clacu11g1631 | 1059 | Pfam | WD domain, G-beta repeat | 310 | 334 | IPR001680 | GO:0005515(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu02g2137 | Clacu-Chr2:34546951 | Clacu11g1631 | Clacu-Chr11:27454631 | 1.70E-17 | dispersed | |
Clacu08g1281 | Clacu-Chr8:22750550 | Clacu11g1631 | Clacu-Chr11:27454631 | 7.80E-102 | dispersed | |
Clacu11g1607 | Clacu-Chr11:27240050 | Clacu11g1631 | Clacu-Chr11:27454631 | 2.90E-101 | dispersed | |
Clacu11g1631 | Clacu-Chr11:27454631 | Clacu02g0411 | Clacu-Chr2:3697456 | 1.20E-18 | dispersed | |
Clacu11g1631 | Clacu-Chr11:27454631 | Clacu08g1338 | Clacu-Chr8:23406850 | 1.60E-121 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu11g1631 | K11807 | - | csv:101206836 | 1305.81 |