Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu11g1749 | ATGGGAGCTGAATCAGGGCTTGCAATGTTTTGTGGAATAATTCATAAAATAAAACCCTACTTAGCTATGATTTCCTTGCAATTTGGATATGCAGGGATGTATATTGTCACGATGCTTTGTCTTAAGAAGGGCATGAACCATTACGTTCTCGCCGTTTATCGACACGTCGTTGCCACCATTGTCATCTCTCCCTTCGCCATCGTCCTCGAAAGAAAAATAAGGCCAAAGATGACATTCCCAATCTTTGCACGAATATTGCTCCTCGGTTTTCTCGAGCCAGTGTTGGATCAAAATCTATACTATGTGGGTTTGAAACTTACTTCAGCAACATTCACTTCTGTCACCATCAATATTCTCCCTGCAGTAACCTTCATTATGGCTCTCATTTTCAGGCTAGAAAGTGTGAATTTGAAGAAGATTCGTAGCATCGCGAAGGTGGTAGGAACATTGGTGACAATCGGCGGAGCAATGGTGATGACTCTATACAAAGGACCAATCGTCGACATATTCCACGGCCATGGACGCCACGCCGCCCACCACAGTACTGAGTCCGCCGACCAGCACTGGGTCCTCGGAACCCTCATGCTTCTCGGCAGCATCGTCGGCTGGTCCGGTTTCTTCATCTTGCAATCCTTCACACTGAGGAAATACCCGGCGGAGCTGTCGTTGACCGCCCTGATATGCGTGGCCGGCACGGTGGAGGGCTCCATTGTGACGCTTATTATGGAGCGTGACTTTAGCGTGTGGGCCATTGGCTGGGACTCTCGCCTTCTTGCCGCTGTTTATACCGGTGTGATATGCTCTGGACTTGCATATTACATACAAGGAGTGGTGATTCGGGAACGTGGCCCAGTTTTTGTTACCTCTTTTACCCCTCTCTGCATGATTATTACCGCCGTCCTTGGCTCCATTGTTTTGGCTGAGCAAATTCACCTTGGAAGCATAATCGGAGCTATTTTCATAGTGATGGGGCTATACTTAGTGGTGTGGGGCAAAGCCAAGGACCATCTAAACAAATTGACGAATCAAAAAAGCGGCGCCACCACCACCGAATTACCGATCACCGCCGAGCCGGAAACCACCGCCACCGCCGAGCGTTGTTCTTCCAAGGCTCCACCGGCGTGA | 1125 | 49.16 | MGAESGLAMFCGIIHKIKPYLAMISLQFGYAGMYIVTMLCLKKGMNHYVLAVYRHVVATIVISPFAIVLERKIRPKMTFPIFARILLLGFLEPVLDQNLYYVGLKLTSATFTSVTINILPAVTFIMALIFRLESVNLKKIRSIAKVVGTLVTIGGAMVMTLYKGPIVDIFHGHGRHAAHHSTESADQHWVLGTLMLLGSIVGWSGFFILQSFTLRKYPAELSLTALICVAGTVEGSIVTLIMERDFSVWAIGWDSRLLAAVYTGVICSGLAYYIQGVVIRERGPVFVTSFTPLCMIITAVLGSIVLAEQIHLGSIIGAIFIVMGLYLVVWGKAKDHLNKLTNQKSGATTTELPITAEPETTATAERCSSKAPPA | 374 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 28669297 | 28672210 | + | ClG42_11g0174900.10 | Clacu11g1749 | 262626 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu11g1749 | 374 | MobiDBLite | consensus disorder prediction | 349 | 374 | - | - | |
Clacu11g1749 | 374 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 250 | 333 | - | - | |
Clacu11g1749 | 374 | PANTHER | WAT1-RELATED PROTEIN | 21 | 342 | IPR030184 | GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro) | |
Clacu11g1749 | 374 | Pfam | EamA-like transporter family | 191 | 329 | IPR000620 | GO:0016020(InterPro) | |
Clacu11g1749 | 374 | Pfam | EamA-like transporter family | 23 | 149 | IPR000620 | GO:0016020(InterPro) | |
Clacu11g1749 | 374 | MobiDBLite | consensus disorder prediction | 349 | 367 | - | - | |
Clacu11g1749 | 374 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 53 | 162 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu09g2041 | Clacu-Chr9:35246459 | Clacu11g1749 | Clacu-Chr11:28669297 | 1.20E-84 | dispersed | |
Clacu11g1455 | Clacu-Chr11:25686556 | Clacu11g1749 | Clacu-Chr11:28669297 | 1.60E-55 | dispersed | |
Clacu11g1749 | Clacu-Chr11:28669297 | Clacu11g1782 | Clacu-Chr11:29030665 | 2.80E-36 | dispersed | |
Clacu01g1095 | Clacu-Chr1:16150223 | Clacu11g1749 | Clacu-Chr11:28669297 | 5.90E-58 | transposed | |
Clacu02g1517 | Clacu-Chr2:28630346 | Clacu11g1749 | Clacu-Chr11:28669297 | 4.70E-60 | transposed | |
Clacu04g0634 | Clacu-Chr4:20021859 | Clacu11g1749 | Clacu-Chr11:28669297 | 6.00E-99 | transposed | |
Clacu06g0898 | Clacu-Chr6:11773614 | Clacu11g1749 | Clacu-Chr11:28669297 | 4.70E-71 | transposed | |
Clacu06g1087 | Clacu-Chr6:19980089 | Clacu11g1749 | Clacu-Chr11:28669297 | 2.00E-58 | transposed | |
Clacu11g1504 | Clacu-Chr11:26195377 | Clacu11g1749 | Clacu-Chr11:28669297 | 4.70E-93 | transposed | |
Clacu11g1749 | Clacu-Chr11:28669297 | Clacu08g0702 | Clacu-Chr8:16778760 | 2.70E-100 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu11g1749 | - | - | - | 0.0 |