Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu11g1868 ATGGCAATGGCGGATTTCAAGCTTCATCGTCTTCTTCTTTCCTTCCTCTTTTTATTTCTTTTACTCATTCCTTCCGTAATCGCAGCAGAGGATTGTCAATGTCCTGAAGACACAGAGGAAGACACAGGGGAACGAAATGCAACTTTAGCTATGAAATACAAAGTCATCGCCATAGCTACGATTCTCGTTGCGGGAATCATTGGTGTGGTGATTCCTTTGCTTGGGAAGGTGATTCCGGCGTTAAGTCCGGAGAAGGATATTTTCTTTGTGATTAAAGCTTTTGCTGCTGGAGTTATATTAGCTACTGGATTTATTCACGTTCTTCCTGATGCTTATGAAAATCTTACGTCGTCGAAATTGAAAGAGGATCCATGGGGGAAGTTTCCGTTCACTGGTTTAGTGGCTATGGTGGCGGCGATGGCTACTTTGATGGTGGATGCGGGTGCGAGCTCTTATTATACTCGGATTCATCTTAATAAAGCGCAGCCTGAGTTGATTGGAGATGATGAAATGCGGGGAGGCGGTGGTCATGATGGTCACGTTCATGTTCATACTCATGCCACTCATGGACATGCTCATGGCTCCGCCGATGTCGTCGGTTCATCCACCGAGATTCTCCGCCACCGTGTCATTTCTCAGGTATTGGAGCTGGGGATAGTGGTACATTCGGTAATTATAGGAATTGGTTTGGGTGTTTCTGAAACTCCGAAAACAATAAGACCTCTTGTGGCCGCCATCACTTTTCATCAGTTATTTGAAGGCATGGGCCTCGGAGGATGCATCGCTCAGGCAAAATTCAAGAACAGGGCAACGATAATAATGGGGCTTTTCTTTTGCTTGACCACACCAATTGGGATAGCAATAGGCATTGGAGTAACGAAGACTTATGATGAAGATAGCCCAAAAGCACTTATAGTGGAAGGAATTTTGAATGCGGCTTCTTCGGGTATTTTAATCTATATGGCTCTTGTAGATCTTCTTGCTGCTGATTTTATGAACCCCAGAATGCAAAGCAATGGAAAACTTCAACTTTTTGCTAACCTTTCTCTTATTCTTGGAGCTGCCTTGATGTCCTTGCTTGCTATATGGGCATAG 1095 44.29 MAMADFKLHRLLLSFLFLFLLLIPSVIAAEDCQCPEDTEEDTGERNATLAMKYKVIAIATILVAGIIGVVIPLLGKVIPALSPEKDIFFVIKAFAAGVILATGFIHVLPDAYENLTSSKLKEDPWGKFPFTGLVAMVAAMATLMVDAGASSYYTRIHLNKAQPELIGDDEMRGGGGHDGHVHVHTHATHGHAHGSADVVGSSTEILRHRVISQVLELGIVVHSVIIGIGLGVSETPKTIRPLVAAITFHQLFEGMGLGGCIAQAKFKNRATIIMGLFFCLTTPIGIAIGIGVTKTYDEDSPKALIVEGILNAASSGILIYMALVDLLAADFMNPRMQSNGKLQLFANLSLILGAALMSLLAIWA 364
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 29811139 29813318 + ClG42_11g0186800.10 Clacu11g1868 262745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu11g1868 364 Pfam ZIP Zinc transporter 52 361 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
Clacu11g1868 364 PANTHER ZINC/IRON TRANSPORTER 48 363 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
Clacu11g1868 364 NCBIfam ZIP zinc/iron transport family 38 364 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu01g2395 Clacu-Chr1:34594856 Clacu11g1868 Clacu-Chr11:29811139 5.60E-79 dispersed
Clacu02g1995 Clacu-Chr2:33409658 Clacu11g1868 Clacu-Chr11:29811139 2.90E-61 dispersed
Clacu08g1859 Clacu-Chr8:27893969 Clacu11g1868 Clacu-Chr11:29811139 7.20E-73 dispersed
Clacu09g2303 Clacu-Chr9:37733939 Clacu11g1868 Clacu-Chr11:29811139 1.20E-97 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu11g1868 K14709 - csv:101215851 573.548