Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu11g1892 ATGTGGTCTGTGGCAGCTACGATTTCAATTTGGATAATACTTGTGGTATTATTATTATTGGGATGCAAATTTGTAAACTGGATTTGGTTGAAGCCTAAGAAATTAGAGAAGGTTTTAAGAGAGCAAGGATTCGCCGGAAATTCTTACCGGATTCTCTACGGCGACTTGAAGTTCAGAGCTGCCATGAGAGAGCAGGCACTGTCCAAGCCCATGAATTTCTCCAATGATATCGCTCCACGTGTCATTCCATCTATTCATCATACCATCCAGAATTATGGCAAAAATTCATTTATGTGGCTTGGACCCATACCAAGAGTGCACATCATGGACCCTGAACAACTTAAAATTGTGTTTTCATTGATCAATGATTTCCAAAAGCCAACTATAAATCCCTTTGCCAGGTTGCTTGCAGATGGGATTTTAAATCATGAAGGACCAAAATGGGTCAAACACAGAAAGATAATCAATCCTGCATTTCATTTACAAAAGCTTAAGGATATGGTACCAGCATTCTATCATAGTTGTAACGAGATGATTAGCAAATGGGAAAACATGGTCTTTGTAGAAGAATCTTGTGAGTTAGATGTCATGCCTTACCTACAAAATATGACTGCTGATGTGATTTCTCGAACTGCATTTGGTAGTAGCTATGAGAAAGGGAAAAAGATCTTCAAGCTTCAAACTGAACTAGCTGAATTGGTGATTCAATCTACCTTAGGGGTTTATATTCCAGGATGGAGATTCCTACCCACAAAGTCAAACAATAAAATGAAAGAGATAAGTAATGAGATAACAACTTTGATCTTGGGTATTATGAATGAAAGGGAAAAGTCTATGAAGGCAGGTGAAGCTATACAAACTGATCTACTTAGCATTCTCATGGAATCCAATTTGAATGAAATTAAACAACATGGAAACAATAAAGACATTGGAATGAGCATAGAAGATGTTATTGCTGAATGCAAGCTTTTCTATATTGCTGGTCAAGAAACTACAGCTACATTACTAGTTTGGACGATGGTATTGTTGAGTTCATACTCAGAATGGCAAGAGCAAGCAAGAGCAGAGGTCTTTGAGATCTTTGGTAACAAGAAACCAGATTATGATGGCTTAAGTCAACTAAAAGTTGTAACTATGATCTTGAACGAGGTTCTTAGGTTATACCCACCAGTGAGTATGTTTGGTCGTTTTGTTAAAAAAGAAACACGACTTGGAAAATTGACTTTACCAGCCGGAGTGATGTTGGCCTTACCAACTATTCTTATCCAACGTGATCCTGAGCTATGGGGAGAAGATGCAAATGAATTTAAACCAGAAAGATTTTCTAAGGGAGTTTCTAAAGCAACAAAAAATCCAAGTGCTTTTGTACCATTTGGTTGGGGTCCTCGAATATGCATAGGACTAAACTTTGCCATGATTGAAGCAAAGTTGGCATTATCAATGATCCTTCAACGCTTCTCATTTGAGCTTTCGTCATCGTATACACATGCTCCCACCGTCACCATAACAACGCAACCTCAACATGGAGCTCATATCATCCTACATAAACTGTAG 1554 38.16 MWSVAATISIWIILVVLLLLGCKFVNWIWLKPKKLEKVLREQGFAGNSYRILYGDLKFRAAMREQALSKPMNFSNDIAPRVIPSIHHTIQNYGKNSFMWLGPIPRVHIMDPEQLKIVFSLINDFQKPTINPFARLLADGILNHEGPKWVKHRKIINPAFHLQKLKDMVPAFYHSCNEMISKWENMVFVEESCELDVMPYLQNMTADVISRTAFGSSYEKGKKIFKLQTELAELVIQSTLGVYIPGWRFLPTKSNNKMKEISNEITTLILGIMNEREKSMKAGEAIQTDLLSILMESNLNEIKQHGNNKDIGMSIEDVIAECKLFYIAGQETTATLLVWTMVLLSSYSEWQEQARAEVFEIFGNKKPDYDGLSQLKVVTMILNEVLRLYPPVSMFGRFVKKETRLGKLTLPAGVMLALPTILIQRDPELWGEDANEFKPERFSKGVSKATKNPSAFVPFGWGPRICIGLNFAMIEAKLALSMILQRFSFELSSSYTHAPTVTITTQPQHGAHIILHKL 517
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 29977647 29981349 + ClG42_11g0189200.10 Clacu11g1892 262769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu11g1892 517 Pfam Cytochrome P450 88 492 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g1892 517 CDD CYP72 82 513 - -
Clacu11g1892 517 PANTHER CYTOCHROME P450 FAMILY MEMBER 15 509 IPR050665 GO:0004497(PANTHER)
Clacu11g1892 517 SUPERFAMILY Cytochrome P450 80 515 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g1892 517 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g1892 517 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g1892 517 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g1892 517 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g1892 517 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g1892 517 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g1892 517 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g1892 517 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g1892 517 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g1892 517 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g1892 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Clacu11g1892 517 FunFam Cytochrome P450 734A1 29 517 - -
Clacu11g1892 517 Gene3D Cytochrome P450 74 516 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu05g2555 Clacu-Chr5:33527158 Clacu11g1892 Clacu-Chr11:29977647 9.10E-110 dispersed
Clacu05g2556 Clacu-Chr5:33530765 Clacu11g1892 Clacu-Chr11:29977647 2.10E-106 dispersed
Clacu10g0803 Clacu-Chr10:13432172 Clacu11g1892 Clacu-Chr11:29977647 8.60E-30 dispersed
Clacu11g0418 Clacu-Chr11:3931952 Clacu11g1892 Clacu-Chr11:29977647 2.80E-103 dispersed
Clacu11g0692 Clacu-Chr11:6772761 Clacu11g1892 Clacu-Chr11:29977647 1.80E-89 dispersed
Clacu11g1892 Clacu-Chr11:29977647 Clacu11g1894 Clacu-Chr11:29993226 1.20E-276 dispersed
Clacu11g1891 Clacu-Chr11:29962703 Clacu11g1892 Clacu-Chr11:29977647 6.70E-112 tandem
Clacu11g1892 Clacu-Chr11:29977647 Clacu11g1893 Clacu-Chr11:29985067 2.30E-267 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu11g1892 - - - 0.0