Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Clacu11g1893 | ATGACGTCTGTAGGAGCTACCATTTCAATTTGGTTAATACTTGTGGTATTATTATTATTATTATTGGGATGGAGATTTCTAAACTGGATTTGGTTAAAGCCCAAGAAATTAGAGAAGCTTTTAAGACAGCAAGGCTTCGCCGGAAATTCTTACCGGATTCTCTACGGCGACTTGAAGTTCAGAGCCGCCATGAGAGAGCAGGCCATGTCCAAGCCCATGAACTTCTCCAATCATATTGCTCCACGTGTTATTCCTTCTGTTCATCATACCATCCACAAATATGGCAAGAATTCATTTATGTGGCTTGGATCCATACCCAGAGTGCACATCATGGACCCTGAACAACTTAAAACTGTGTTTTCACTTATCAACGATTTCCAAAAGCCAACTATGAATCCCTTTGTCAAGTTTCTTGCAGATGGACTTGTAAGTCATGAAGGACCAAAATGGGTCAAACATAGAAAGATAATCAACCCTGCATTTCATTTGGAAAAGCTTAAGGATATGATACCAGCATTCTATCAAAGTTGTAATGAGATGGTTAGCAAATGGGAAAGCATGGTTTCTGTAGAAGGATCTTGTGAGTTAGATGTAATGCCTTTTCTAAAAAATATGGCCGCTGATGTGATTTCTCGAACTGCATTTGGGAGTAGCTATGAGAAAGGAAAAGAGATCTTCAAGCTTCAAACTGAACTAGGTGGTTTGGTGATTCAATCTACCTTAGGGGTTTATATTCCAGGATGGAGATTTCTACCTACAAAGTCAAACAATAAAATGAAAGAAATAAGTAAAGAGATATCAACTTTGGTCTTGGGTATTATGAATGAAAGGGAAAAGTCTATGAAGGCAGGCGAAGCTATACAAAATGATCTACTAAGCATTCTCATGGAATCCAATTTGAATGAAATTAAACAACATGGAAACAATAAAGACATTGGAATGAGCATAGAAGATGTTATTGCTGAATGCAGGCTTTTCTATATTGTTGGACAAGAAACTACAGCAACATTACTAACTTGGACTATGGTATTATTGAGTTCATACTTAGAATGGCAAGAGCAAGCAAGAGCAGAGGTCTTTGAGATCTTTGGTAACAAGAAACCAGATTATGATGGTTTAAGTCGTCTAAAAATTGTAACTATGATCTTAAACGAGGTTCTCAGGTTATACCCACCAGTGAGTATGTTTGACCGTCTCATTAAAAAAGAAACAAAACTTGGAAATTTGACTTTACCAGCAGGAGTGATATTGGGCTTACCAATTGTTCTTATCCAACATGATCCTGAGTTATGGGGAGATGATGCAGATGAATTTAAACCAGAAAGATTTTCTGAGGGAGTTTCTAAAGCAACAAAAAATCCAAGTGCTTTTATACCATTTGGTTGGGGTCCTCGAATGTGCATAGGACTAAACTTTGCCATGATTGAAGCAAAAATGGCATTGTCAACGATCCTACAACGCTTCTCATTTGAGCTTTCCTCATTCTATACACACGCTCCCGCTATCTCCTTAACCATGCAGCCTCAACATGGAGCTCATCTCAAACTACGCAGACTGTAG | 1560 | 38.21 | MTSVGATISIWLILVVLLLLLLGWRFLNWIWLKPKKLEKLLRQQGFAGNSYRILYGDLKFRAAMREQAMSKPMNFSNHIAPRVIPSVHHTIHKYGKNSFMWLGSIPRVHIMDPEQLKTVFSLINDFQKPTMNPFVKFLADGLVSHEGPKWVKHRKIINPAFHLEKLKDMIPAFYQSCNEMVSKWESMVSVEGSCELDVMPFLKNMAADVISRTAFGSSYEKGKEIFKLQTELGGLVIQSTLGVYIPGWRFLPTKSNNKMKEISKEISTLVLGIMNEREKSMKAGEAIQNDLLSILMESNLNEIKQHGNNKDIGMSIEDVIAECRLFYIVGQETTATLLTWTMVLLSSYLEWQEQARAEVFEIFGNKKPDYDGLSRLKIVTMILNEVLRLYPPVSMFDRLIKKETKLGNLTLPAGVILGLPIVLIQHDPELWGDDADEFKPERFSEGVSKATKNPSAFIPFGWGPRMCIGLNFAMIEAKMALSTILQRFSFELSSFYTHAPAISLTMQPQHGAHLKLRRL | 519 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 29985067 | 29989351 | + | ClG42_11g0189300.10 | Clacu11g1893 | 262770 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Clacu11g1893 | 519 | PRINTS | E-class P450 group I signature | 457 | 467 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu11g1893 | 519 | PRINTS | E-class P450 group I signature | 91 | 110 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu11g1893 | 519 | PRINTS | E-class P450 group I signature | 338 | 364 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu11g1893 | 519 | PRINTS | E-class P450 group I signature | 318 | 335 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu11g1893 | 519 | PRINTS | E-class P450 group I signature | 205 | 223 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu11g1893 | 519 | PRINTS | E-class P450 group I signature | 467 | 490 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu11g1893 | 519 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 15 | 512 | IPR050665 | GO:0004497(PANTHER) | |
| Clacu11g1893 | 519 | PRINTS | P450 superfamily signature | 381 | 392 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu11g1893 | 519 | PRINTS | P450 superfamily signature | 329 | 346 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu11g1893 | 519 | PRINTS | P450 superfamily signature | 467 | 478 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu11g1893 | 519 | PRINTS | P450 superfamily signature | 458 | 467 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu11g1893 | 519 | SUPERFAMILY | Cytochrome P450 | 81 | 517 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu11g1893 | 519 | FunFam | Cytochrome P450 734A1 | 31 | 519 | - | - | |
| Clacu11g1893 | 519 | Pfam | Cytochrome P450 | 90 | 494 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu11g1893 | 519 | CDD | CYP72 | 84 | 514 | - | - | |
| Clacu11g1893 | 519 | Gene3D | Cytochrome P450 | 74 | 518 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu11g1893 | 519 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 460 | 469 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Clacu11g1893 | Clacu-Chr11:29985067 | Clacu06g0818 | Clacu-Chr6:9933822 | 2.20E-63 | dispersed | |
| Clacu11g1892 | Clacu-Chr11:29977647 | Clacu11g1893 | Clacu-Chr11:29985067 | 2.30E-267 | tandem | |
| Clacu11g1893 | Clacu-Chr11:29985067 | Clacu11g1894 | Clacu-Chr11:29993226 | 1.20E-274 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Clacu11g1893 | - | - | - | 0.0 |