Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu11g1894 ATGTCGTCTGTAGGAGCTACCATTTCAATTTGGTTAATACTTGTGGTATTATTATTATTATTATTGGGATGGAGATTTCTAAACTGGATTTGGTTAAAGCCCAAGAAATTAGAGAAGCTTTTAAGACAGCAAGGCTTCGCCGGAAATTCTTACCGGATTCTCTACGGCGACTTGAAGTTCAGAGCCGCCATGAGAGAGCAGGCCATGTCCAAGCCCATGAACTTCTCCAATCATATTGCTCCACGTGTTATTCCTTCTGTTCATCATACCATCCACAAATATGGCAAGAATTCATTCATGTGGCTTGGACCTATGCCAAGAGTGCACATCATGGACCCTGAACAACTTAAAATTGTATTTTCAATGATCAATGATTTCCAAAAGCCAGATTCAAATCCCCTGGTCAAGTTGCTTGCAGATGGAATTGTAAATTATGAAGGACCAAAATGGGTCAAACATAGAAAGATAATCAACCCTGCATTTCATTTAGAAAAGCTTAAGGATATGGTACCAGCATTCTATCACAGTTGTAATGAGATGGTTAGCAAATGGGAAAGTATGGTCTCCGTAGAAGGATCTTGTGAGTTGGATGTAATGCCTTATTTACAAAATATGGCTGCTGATGTGATTTCTCGAACTGCATTTGGTAGTAGCTATGAGAAAGGGAAAAAGATCTTCAAGCTTCAAACTGAACTAGCTGAATTGGTGATTCAATCTACCTTAGGGGTTTATATTCCAGGATGGAGATTTCTACCCACAAAGTCAAACAATAAAATGAAAGAGATAAGTAATGAGATAACAACTTTGATCTTGGGTATTATGAATGAAAGGGAAAAGTCTATGAAGGCAGGTGAAGCTATACAAACTGATCTACTTAGCATTCTCATGGAATCCAATTTGAATGAAATTAAACAACATGGAAACAATAAAGACATTGGAATGAGCATAGAAGAAGTTATTGTTGAATGCAAGCTTTTCTATATTGCTGGCCAAGAAACTACAGCTACATTACTAGTTTGGACGATGGTATTGCTGAGTACATACTCAGAATGGCAAGAGCGAGCAAGAGCAGAGGTCTTTGAGATTTTTGGTAACAAGAAACCAGACTATGATGGTTTAAGTCGACTAAAAGTTGTAACTATGATCTTGAATGAGGTTCTTAGGTTATACCCACCAGTGAATATGTTTGGTCGTGTTGTTAAAAAAGAAACAAAACTTGGAAATGTGACTTTACCAGCAGGAGTGATGTTGGGCTTACCAAGTATTCTCATCCAACGTGATCCTGAGTCATGGGGAAATGATGCAGATGAATTTAAACCAGAAAGATTTTCTGAGGGAATTTCTAAAGCAACAAAAAATCCAAGTACTTTTCTACCATTTGGTTGGGGTCCTCGAATATGCATAGGACTAAACTTTGCCATGATTGAAGCAAAAATGGCATTGTCAATAATCCTACAACGCTTCTCATTTGAGCTTTCATCATCATATACACACGCTCCCACCGCCTTCTTAACAACCCAGCCTCAACATGGAGCTCATCTCATACTACACAAACTCTAG 1560 38.27 MSSVGATISIWLILVVLLLLLLGWRFLNWIWLKPKKLEKLLRQQGFAGNSYRILYGDLKFRAAMREQAMSKPMNFSNHIAPRVIPSVHHTIHKYGKNSFMWLGPMPRVHIMDPEQLKIVFSMINDFQKPDSNPLVKLLADGIVNYEGPKWVKHRKIINPAFHLEKLKDMVPAFYHSCNEMVSKWESMVSVEGSCELDVMPYLQNMAADVISRTAFGSSYEKGKKIFKLQTELAELVIQSTLGVYIPGWRFLPTKSNNKMKEISNEITTLILGIMNEREKSMKAGEAIQTDLLSILMESNLNEIKQHGNNKDIGMSIEEVIVECKLFYIAGQETTATLLVWTMVLLSTYSEWQERARAEVFEIFGNKKPDYDGLSRLKVVTMILNEVLRLYPPVNMFGRVVKKETKLGNVTLPAGVMLGLPSILIQRDPESWGNDADEFKPERFSEGISKATKNPSTFLPFGWGPRICIGLNFAMIEAKMALSIILQRFSFELSSSYTHAPTAFLTTQPQHGAHLILHKL 519
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 29993226 29999706 + ClG42_11g0189400.10 Clacu11g1894 262771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu11g1894 519 PRINTS E-class P450 group I signature 318 335 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g1894 519 PRINTS E-class P450 group I signature 421 445 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g1894 519 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g1894 519 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g1894 519 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g1894 519 PRINTS E-class P450 group I signature 205 223 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g1894 519 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g1894 519 Pfam Cytochrome P450 90 494 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g1894 519 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g1894 519 PRINTS P450 superfamily signature 381 392 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g1894 519 PRINTS P450 superfamily signature 467 478 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g1894 519 PRINTS P450 superfamily signature 329 346 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g1894 519 CDD CYP72 84 515 - -
Clacu11g1894 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Clacu11g1894 519 PANTHER CYTOCHROME P450 FAMILY MEMBER 15 512 IPR050665 GO:0004497(PANTHER)
Clacu11g1894 519 Gene3D Cytochrome P450 74 518 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g1894 519 FunFam Cytochrome P450 734A1 31 519 - -
Clacu11g1894 519 SUPERFAMILY Cytochrome P450 81 517 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu03g1670 Clacu-Chr3:30423953 Clacu11g1894 Clacu-Chr11:29993226 2.50E-216 dispersed
Clacu06g1164 Clacu-Chr6:22108467 Clacu11g1894 Clacu-Chr11:29993226 1.50E-107 dispersed
Clacu10g1504 Clacu-Chr10:28306361 Clacu11g1894 Clacu-Chr11:29993226 1.40E-174 dispersed
Clacu11g1891 Clacu-Chr11:29962703 Clacu11g1894 Clacu-Chr11:29993226 5.60E-111 dispersed
Clacu11g1892 Clacu-Chr11:29977647 Clacu11g1894 Clacu-Chr11:29993226 1.20E-276 dispersed
Clacu11g1894 Clacu-Chr11:29993226 Clacu06g0818 Clacu-Chr6:9933822 2.70E-61 dispersed
Clacu11g1893 Clacu-Chr11:29985067 Clacu11g1894 Clacu-Chr11:29993226 1.20E-274 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu11g1894 - - - 0.0