Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu11g1978 | ATGACTGGGAAAGAGATTCTCCACAAGATGAAGGAAAAAGTTGGGCTATGTTCCTCGGATCCAGACTCAGGAAAAGGAAAGAGCAAGATGTCCAAGCATGTCACACATGGTTTTCACTTGGTGGAAGGGAAATCAAATCATGCCATGGAAGATTATGTTGTTGCAGAGTTTAAGCAAGTTGATCATCATGAGCTTGGTTTATTTGCAATCTTCGATGGCCATTTGAGCAATTCTATTCCTGATTATCTACAATCGCATTTATTTTCTAATATAATAAATGAGCCTGATTTCTGGACCGATCCAAAGAACGCAGTCAGGAAAGCATACGAGGAAACTGATGCTTACATTTTAGAGAAAGCTGTTGATTTTAGTCATGGGGGTTCAACTGCTGTTACGGCCATATTGATAGACTGTAAGACACTAGTAGTGGGCAATGTGGGGGACTCCCGTGCAGTTATCTGTAGTAAAGGCAAGGCCAGACAATTATCAATCGATCATGAGCCGAGCTTTGAGAGAAAAAGCATTGAGGAAAGAGGTGGTTTTGTATCAAACTTTCCTGGAGATGTTCCCCGTGTTGATGGGCAGTTGGCAGTCGCAAGGGCGTTTGGTGATAGGAGCTTAAAGAAACATTTGAGTTCAGAGCCTTATGTGGTAATGGAGATGATAGATGACGAGACCGAATTTGTTATCTTGGCAAGTGATGGATTGTGGAAGGTTATGTCAAATGAAGAAGCGGTAGACTCGATCAGGCATATAAAAGACGCGCATGCAGCTGCCAAACACTTGACAGAGGAGGCCCTCAAGAGGAAGAGCAAAGATGATATCTCTTGTATAGTTGTGAGATTTCACTGA | 852 | 42.49 | MTGKEILHKMKEKVGLCSSDPDSGKGKSKMSKHVTHGFHLVEGKSNHAMEDYVVAEFKQVDHHELGLFAIFDGHLSNSIPDYLQSHLFSNIINEPDFWTDPKNAVRKAYEETDAYILEKAVDFSHGGSTAVTAILIDCKTLVVGNVGDSRAVICSKGKARQLSIDHEPSFERKSIEERGGFVSNFPGDVPRVDGQLAVARAFGDRSLKKHLSSEPYVVMEMIDDETEFVILASDGLWKVMSNEEAVDSIRHIKDAHAAAKHLTEEALKRKSKDDISCIVVRFH | 283 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 30743185 | 30745656 | + | ClG42_11g0197800.10 | Clacu11g1978 | 262855 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu11g1978 | 283 | PANTHER | PROTEIN PHOSPHATASE | 31 | 280 | IPR015655 | GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Clacu11g1978 | 283 | Gene3D | - | 30 | 283 | IPR036457 | - | |
Clacu11g1978 | 283 | SUPERFAMILY | PP2C-like | 31 | 283 | IPR036457 | - | |
Clacu11g1978 | 283 | SMART | PP2C_4 | 31 | 280 | IPR001932 | - | |
Clacu11g1978 | 283 | FunFam | Probable protein phosphatase 2C 39 | 25 | 283 | - | - | |
Clacu11g1978 | 283 | CDD | PP2Cc | 43 | 282 | IPR001932 | - | |
Clacu11g1978 | 283 | ProSiteProfiles | PPM-type phosphatase domain profile. | 35 | 282 | IPR001932 | - | |
Clacu11g1978 | 283 | Pfam | Protein phosphatase 2C | 47 | 275 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu01g2600 | Clacu-Chr1:36262009 | Clacu11g1978 | Clacu-Chr11:30743185 | 5.20E-84 | dispersed | |
Clacu11g1011 | Clacu-Chr11:12123125 | Clacu11g1978 | Clacu-Chr11:30743185 | 2.90E-25 | dispersed | |
Clacu11g1155 | Clacu-Chr11:16443496 | Clacu11g1978 | Clacu-Chr11:30743185 | 1.10E-17 | dispersed | |
Clacu11g1596 | Clacu-Chr11:27124233 | Clacu11g1978 | Clacu-Chr11:30743185 | 1.00E-86 | dispersed | |
Clacu11g1978 | Clacu-Chr11:30743185 | Clacu07g0239 | Clacu-Chr7:2805238 | 1.00E-99 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu11g1978 | K17506 | - | csv:101215129 | 535.798 |