Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu11g2033 ATGGAGGTTTGTTTCTCAACGGAATTGCCCTCTTTCGATTTGCGGATTGCTGTTGCAGAAGAGGCTGGTGTTTTTTGGGTTGAGAGTGTGGTGAATTTGGGGTGGAATTCTGTGAAATTTTGGAATTTGAAGTACTGGGGTTTTGGCAAAATGATGTTATCCGCGTCGCCTTCGGCAATAGCTCGAAGCTCACTGGAGGAAATGCTTGATTCTCTTCGACGAAGGGATGAGATTGAGAAGCCTAAAGACTTGCCGCCTGCATTGCCGTCTCGGCCCACTTCGAAGGCTCGGATTCCGCCGGTGAAGCGGGCTTTACCCGTCAATTTCAGGGTTAATGATGACGGTTCCTCAGAGTGCTCTATTAATGTCTTTAATGGAAGGGAAGATGCAATGAGGAAGGAGAATGGTTTGGGTAACTTTGCATTCAGGAGAATAAAGGGAGATCAAGACGATGAATCGCCTTACATGGTAGCTTCAGAAAATGATAATAGAGATCAAGTGTATGGCTCGAATGGTGCAAATATTCAAGGGTCTAACTGGGAGGACAATATCAGTTATTTTCTTCATAAGAAACTCCGGGTTTGGTGTCAACTTCCAACTGGACAATGGGAGTTAGGAACTATACAGTCAAACAGTGGGGTGGAGGCATCTGTCATGCTCTCAAACAAAAAGGTTGTTAAAGTTTCAACAGTAGATCTTTTACCTGCTAATCCAGATATAGTGGAGGGGGTTGATGATCTTGCACAGCTCGGTTATTTGAATGAGCCTTCGGTTATTCACAGTCTCCAGAGAAGATTTTCTCGGGATAAAATTTATAGTAATGCTGGGTCAGTTTTGATTGCAGTCAATCCCTTGAAAGACACTAAACAGTATGGAAATGGATTAATTACAGCCTATAGACAGAGAGTCATGAATGACCCTCATGTTTATGCTATAGCTGATTCTGCCTATTCTGCGATGATGCAAGATGAAGTTAATCAATCTATTATCATCAGTGGAGAAAGTGGAGCTGGAAAAACTGAGACAGCAAAAGCTGCAGTTCAATACCTGGCTGCTCTTGGTGGCGGCAGTGGCATAGATGATAGAATCCCACAGGCGAATGTTATACTGGAAGCATTTGGGAATGCTAAAACCTCCAGAAACAACAATGCTAGCAGATTTGGGAAGTTGATTGAAATTCTTTTTAGCAGAACAGGGAAGATATGTGGTGCTGTAATCCAGACATTTCTGTTGGAAAAGTCAAGAGTTGTTCAGCTGGTCAATGGTGAGAGATCATTCCATGTCTTTTATCAACTTTGTGCTGGAGCATCATCTACACTTAAAGAGAAATTGAATATCAGAGTGGCTAGTGAGTACAGTTACCTTAATCACAGTGAATGCCTGGTGATTGGTGGTGTGGATGATGCACGGAAATTTCATATTCTTGTGGAAGCCCTAGATACACTTCAATTCACAAAAGAAGATCAAGAGCATGCATTTGGTTTGCTTGCTGCGGTGTTGTGGATAGGAAACATTACGTTTCAAACAATTGATAGTGAAAATCATGTGGAGGTCATGGCTAATGAAGCGGTTGCAAATGCTGCCAAGCTGATGGGTTGCAGTCCTAATGAGCTTAAGTTAGTTTTGTCGATCCACAAAGTGCAATCAGGCAACGGCAGCATTGCTAAAAAATTGACATTACGCCAGGCAACCGATGCAAGAGATGCTTTGGCAAAATTTATCTATGCAAGCTTGTTTGACTGGCTTGTAGAACAGATCAATAAGTCACTTAAACCAAGAACGGAGCATTCTGGAAGATCCATAAATATTCTTGACTTCTATGGGTTTGAGTCATTTAAGAAGAATGGCTTCGAACAGTTTTGTATCAATTATGCAAATGAGAGACTGCAGCAGCATTTTATGAGGCACCTGTTCAAACTTCAGCAGGAGGACTATGAATTTAATGGGGTCGATGGCACAAAAGTCAACTTTGAAGACAATCAAGAGTGTTTGAATCTTATTGAGAAGAAACCTCTTGGAGTTCTAGCTTTGTTGGACGAAGAGTTAAATTTTCCCAAGGCTACAGATCTTACATTTGCTAATAAACTAAAGCAACACTTTAAGTCTCAACCTTGCTTTAAAGGGGAAAGAGGTAGGGCTTTTGGTATTCGCCATTATGCTGGAGAGGTTGTATATGATACAAATGGGTTTTTGGAGAAGAATAGAGATCTGCTGCATTCCGATTCCATCCAACTCTTTTCATCATGTACTTGCAAGCTACTGCAATTACTTGCCTCAAAACTGATTAACCATTCCCAGAAACCAACAGTTTCAATGTGCTCTACAGAAGTAGTAGAATCCCCCGAGCCAGGTGTTGGTACCAAGTACAAGCTTCTACTATTTGACCTATTTCATAAATTGGAGTACACCAGCCATCATTTCATTTGTTGCATAAGGCCGAACAGAAATCAAGTTGGTGGCTTATTTGAGGAGGACCTTGTCCTACAACAGCTTCGGTACTGTGGAATTTTGGAAGTTGTGAGAATTTCAAGATCTGGATATCCTACCAGAATGATGCATCACGAATTTGCTGGAAGGTATGGATTCCTCCTTAAAGAAACTGGTGCATCTCGAGATCCATTGAGTATATCAATTGCTGTTCTACAACAATTTAATGTCCACCCCGAGATGTACCACGTTGGTTATACCAAACTATTTTTCCGAACTGGGCAGATTAGGGCATTGGATGAAAGGAGGAAGCAAGTTATGCAAGGCATCCTAGGGGTACAAAAGTACTTTCGTGGTTGCCATTCCCGTGGCAACTTCCATGATCTTAAGCAAGGGGCCACTACCTTACAATCATTTATTCGTGGTGAAAATGCCAGAAGGAGATGTACCGTTAAGGTGAAGAGGTTCTCATTCGTTGTGTATGCTTTTAGCGTTCCTAAGAAGGCTTACGAACTCCAGGGAATCATACGTTTACAATCTGTCATACGTGGTTCATTGGCTCGAAAGCATTTTCGGAGCATGCGTGATTCAAAGAGGGATTTTCCTGAAAACAAGAAATCTAAACTGACAACAGGCGGAAGGGTTTCAGAGGAAGAATTTCAAGAACGGGTTCAATCCTTGCCAACAACTCTGACTGAGCTTCAAAAGAGGGTCCTGGAGGCAGAAGCAACCATAGAGAAAAAGGAAGGGGAAAATGCTGCAATGCGGGAGCAAGTAAAACAATTCGAGTCTAGGCGGTTAGAATATGAAGCCAAGATGAAGTCCATGGAGGATATGTGGCAAAAGCAGATGGCATCTTTGCAAATGAGTCTTGCTGCTGCTAAAAAGACTCTTGCTGCTGAAAATGTAACCTGTCCACCAGGAAGAATTGATGCTGGTAACTCACCACCTCACTATTATGATTCTGAGGATACAACGTCAATGGGATCCCGAACACCTGGTGGTACCACACCTATAAAGGCTTCTGGAATTTCTGAAGTTGGAGCAGGCCGAGAAATGAATGGTACTTTAGTGGCAGTGAACAATCTTGTAAAGGAATTTGAACAGCGAAGAACTGCATTTGACGATGATGCCAAAGCTTTAATTGAAGCAAAATCAGGTCAGGCACAGACAGGGTCTAATTTAAATCCAGATGAAGAATACCGTAAAATTAAAGTCCGATTTGAAGCATGGAAAAAAGAGTACAAGGCTAGATTAAGGGAAACAAAAGCTAAGTTCAGCTTTGTGAATGAATGGAGAGCTCTTGAAAAGAAGGGGGAGAAAACTGTTGAGTTGTCTTCTGACAACATGTGGGTGTTGAAGCTCAACCTGATAAAGCCGAGAAATGTGTCGCCCGTTCGTGGGATGGAAGGAGAGTGTTCAGAAGATTGTTTGTCATTAGCTCCTTTTCTGAAGGAAATACCTCAAGAGCTCATCTTGGCAGATCAGAGAGTCCAGCAGGGTCCTATGGATAACCAGCTGGAAATTGACTAG 3960 42.17 MEVCFSTELPSFDLRIAVAEEAGVFWVESVVNLGWNSVKFWNLKYWGFGKMMLSASPSAIARSSLEEMLDSLRRRDEIEKPKDLPPALPSRPTSKARIPPVKRALPVNFRVNDDGSSECSINVFNGREDAMRKENGLGNFAFRRIKGDQDDESPYMVASENDNRDQVYGSNGANIQGSNWEDNISYFLHKKLRVWCQLPTGQWELGTIQSNSGVEASVMLSNKKVVKVSTVDLLPANPDIVEGVDDLAQLGYLNEPSVIHSLQRRFSRDKIYSNAGSVLIAVNPLKDTKQYGNGLITAYRQRVMNDPHVYAIADSAYSAMMQDEVNQSIIISGESGAGKTETAKAAVQYLAALGGGSGIDDRIPQANVILEAFGNAKTSRNNNASRFGKLIEILFSRTGKICGAVIQTFLLEKSRVVQLVNGERSFHVFYQLCAGASSTLKEKLNIRVASEYSYLNHSECLVIGGVDDARKFHILVEALDTLQFTKEDQEHAFGLLAAVLWIGNITFQTIDSENHVEVMANEAVANAAKLMGCSPNELKLVLSIHKVQSGNGSIAKKLTLRQATDARDALAKFIYASLFDWLVEQINKSLKPRTEHSGRSINILDFYGFESFKKNGFEQFCINYANERLQQHFMRHLFKLQQEDYEFNGVDGTKVNFEDNQECLNLIEKKPLGVLALLDEELNFPKATDLTFANKLKQHFKSQPCFKGERGRAFGIRHYAGEVVYDTNGFLEKNRDLLHSDSIQLFSSCTCKLLQLLASKLINHSQKPTVSMCSTEVVESPEPGVGTKYKLLLFDLFHKLEYTSHHFICCIRPNRNQVGGLFEEDLVLQQLRYCGILEVVRISRSGYPTRMMHHEFAGRYGFLLKETGASRDPLSISIAVLQQFNVHPEMYHVGYTKLFFRTGQIRALDERRKQVMQGILGVQKYFRGCHSRGNFHDLKQGATTLQSFIRGENARRRCTVKVKRFSFVVYAFSVPKKAYELQGIIRLQSVIRGSLARKHFRSMRDSKRDFPENKKSKLTTGGRVSEEEFQERVQSLPTTLTELQKRVLEAEATIEKKEGENAAMREQVKQFESRRLEYEAKMKSMEDMWQKQMASLQMSLAAAKKTLAAENVTCPPGRIDAGNSPPHYYDSEDTTSMGSRTPGGTTPIKASGISEVGAGREMNGTLVAVNNLVKEFEQRRTAFDDDAKALIEAKSGQAQTGSNLNPDEEYRKIKVRFEAWKKEYKARLRETKAKFSFVNEWRALEKKGEKTVELSSDNMWVLKLNLIKPRNVSPVRGMEGECSEDCLSLAPFLKEIPQELILADQRVQQGPMDNQLEID 1319
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 31301357 31312404 + ClG42_11g0203300.10 Clacu11g2033 262910
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Clacu11g2033 1319 Gene3D Myosin VI head, motor domain, U50 subdomain 481 589 - -
Clacu11g2033 1319 Gene3D - 612 803 - -
Clacu11g2033 1319 FunFam Myosin IE heavy chain 481 589 - -
Clacu11g2033 1319 FunFam Myosin heavy chain 424 480 - -
Clacu11g2033 1319 Gene3D Kinesin motor domain 241 846 IPR036961 -
Clacu11g2033 1319 Gene3D - 847 914 - -
Clacu11g2033 1319 Pfam IQ calmodulin-binding motif 983 1001 IPR000048 GO:0005515(InterPro)
Clacu11g2033 1319 Pfam IQ calmodulin-binding motif 941 958 IPR000048 GO:0005515(InterPro)
Clacu11g2033 1319 ProSiteProfiles IQ motif profile. 980 1009 - -
Clacu11g2033 1319 MobiDBLite consensus disorder prediction 76 96 - -
Clacu11g2033 1319 SMART iq_5 914 936 IPR000048 GO:0005515(InterPro)
Clacu11g2033 1319 SMART iq_5 979 1001 IPR000048 GO:0005515(InterPro)
Clacu11g2033 1319 SMART iq_5 937 959 IPR000048 GO:0005515(InterPro)
Clacu11g2033 1319 Gene3D - 424 480 - -
Clacu11g2033 1319 MobiDBLite consensus disorder prediction 1002 1029 - -
Clacu11g2033 1319 ProSiteProfiles Myosin motor domain profile. 242 913 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Clacu11g2033 1319 PANTHER MYOSIN 193 1254 - GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER)
Clacu11g2033 1319 PRINTS Myosin heavy chain signature 600 628 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Clacu11g2033 1319 PRINTS Myosin heavy chain signature 368 395 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Clacu11g2033 1319 PRINTS Myosin heavy chain signature 326 351 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Clacu11g2033 1319 PRINTS Myosin heavy chain signature 272 291 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Clacu11g2033 1319 PRINTS Myosin heavy chain signature 653 681 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Clacu11g2033 1319 CDD MYSc_Myo8 256 901 IPR036022 -
Clacu11g2033 1319 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 222 962 IPR027417 -
Clacu11g2033 1319 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 189 238 IPR004009 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Clacu11g2033 1319 SMART MYSc_2a 236 914 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Clacu11g2033 1319 Coils Coil 1040 1088 - -
Clacu11g2033 1319 ProSiteProfiles IQ motif profile. 938 966 - -
Clacu11g2033 1319 Pfam Myosin head (motor domain) 244 901 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Clacu11g2033 1319 Gene3D - 919 964 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu02g1455 Clacu-Chr2:27980729 Clacu11g2033 Clacu-Chr11:31301357 1.10E-307 dispersed
Clacu09g0799 Clacu-Chr9:7211269 Clacu11g2033 Clacu-Chr11:31301357 2.50E-136 dispersed
Clacu11g2033 Clacu-Chr11:31301357 Clacu06g0134 Clacu-Chr6:1483935 1.10E-146 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu11g2033 K10357 - csv:101210624 2099.32