Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu11g2087 | ATGGCTGTGAAACTCAAACAACTGTGTACTGAGGGATTGGGTGTGTGGGCAATGGCGACGATGGCGATGAAGGGCAAAGTTTGTGTTACAGGGGCTGGAGGGTTTATTGGTTCGTGGGTCGTCAAGCTTCTGCTATCCAGGGATTATATTGTTCACGGAACTGTCAGGGAGCCTAGCGATGCTAAGTATGATCACTTGAGAAAACTTGAGAAAGCGACCGAAAATTTGGAACTGTTTAAAGCTGATTTGCTGAACTATGAGTCTCTGCGTTCAGCGATTGCAGGATGTGATGGAGTTTTCCATGTTGCCTGTCCAGTTCCTTCAACAACTTCATCAAACCCCGAGACAGAAGTGATTGAACCTGCTGTAAAGGGCACACATAATGTGCTTGAAGCTTGTGTCGAAGCAAAAATTAAGCGAGTAGTTGTAGTATCCTCAGCCGCTGCAGTGTTTTTCAATCCCAGTTGGCCTCAAGGTCGAGTAATGGATGAAAGTTGTTGGTCCGATATGGAGCACTGCAGAGCTACTAAGAACTGGTATTTTCTGGCAAAAACAAAAGCTGAAAGTGAAGCCTTGGAGTTTGGGAGAAGATGTGGGCTCGACGTTGTGACTATGTGTCCTACTCTCGTTATCGGGCCGGTTTTGCAGGCAACAGTCAACGCCAGCAGCTTGGTCCTTCTCAAAATTCTAAAAGAAGGATGTGAGTCGATGGAAAACAGGCTACGGATGTTAGTAGACGTACGAGATGTAGCAGAGGCGCTAGTTCTTTTATATGAGAAGGGGGAGGCAGAAGGAAGGTATATCTGTACCGCGCATACAATTGAGACAAGGGAGCTGGTGGATGCATTGAAGAGGAAGTACCCTGATTATAGCTATCCAAAGAAGTTGATTGAAGGGAAGGCGGAGTCGGTAAGTCTGAGCTCGGAGAAGCTGCAAAGATTGGGTTGGAAGTATCGGGCGTTAGAGGACACGCTTGTGGATGCTGTCCAGAGTTTCAAAGATGCCGGCATGTTGGAGTGA | 1020 | 47.06 | MAVKLKQLCTEGLGVWAMATMAMKGKVCVTGAGGFIGSWVVKLLLSRDYIVHGTVREPSDAKYDHLRKLEKATENLELFKADLLNYESLRSAIAGCDGVFHVACPVPSTTSSNPETEVIEPAVKGTHNVLEACVEAKIKRVVVVSSAAAVFFNPSWPQGRVMDESCWSDMEHCRATKNWYFLAKTKAESEALEFGRRCGLDVVTMCPTLVIGPVLQATVNASSLVLLKILKEGCESMENRLRMLVDVRDVAEALVLLYEKGEAEGRYICTAHTIETRELVDALKRKYPDYSYPKKLIEGKAESVSLSSEKLQRLGWKYRALEDTLVDAVQSFKDAGMLE | 339 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 31671316 | 31674483 | + | ClG42_11g0208700.10 | Clacu11g2087 | 262964 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu11g2087 | 339 | PANTHER | NAD DEPENDENT EPIMERASE/DEHYDRATASE | 26 | 330 | IPR050425 | GO:0016616(PANTHER) | |
Clacu11g2087 | 339 | Pfam | NAD dependent epimerase/dehydratase family | 27 | 263 | IPR001509 | - | |
Clacu11g2087 | 339 | Coils | Coil | 69 | 89 | - | - | |
Clacu11g2087 | 339 | Gene3D | - | 18 | 339 | - | - | |
Clacu11g2087 | 339 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 18 | 333 | IPR036291 | - | |
Clacu11g2087 | 339 | FunFam | NAD(P)-binding Rossmann-fold superfamily protein | 20 | 339 | - | - | |
Clacu11g2087 | 339 | CDD | FR_SDR_e | 27 | 316 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu10g1294 | Clacu-Chr10:25869989 | Clacu11g2087 | Clacu-Chr11:31671316 | 3.90E-74 | dispersed | |
Clacu10g1295 | Clacu-Chr10:25887556 | Clacu11g2087 | Clacu-Chr11:31671316 | 6.30E-69 | dispersed | |
Clacu02g1100 | Clacu-Chr2:20613695 | Clacu11g2087 | Clacu-Chr11:31671316 | 4.60E-59 | transposed | |
Clacu03g0035 | Clacu-Chr3:519738 | Clacu11g2087 | Clacu-Chr11:31671316 | 2.20E-53 | transposed | |
Clacu09g0332 | Clacu-Chr9:2828996 | Clacu11g2087 | Clacu-Chr11:31671316 | 2.80E-75 | transposed | |
Clacu10g0611 | Clacu-Chr10:8264515 | Clacu11g2087 | Clacu-Chr11:31671316 | 5.30E-37 | transposed | |
Clacu10g0753 | Clacu-Chr10:10960094 | Clacu11g2087 | Clacu-Chr11:31671316 | 2.20E-61 | transposed | |
Clacu11g2087 | Clacu-Chr11:31671316 | Clacu08g1131 | Clacu-Chr8:21307552 | 1.90E-07 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu11g2087 | - | - | - | 0.0 |