Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu11g2093 | ATGCGTTTTCGCTCAGTGATCACTCCATTATCAGGGATGGCAATGGCGCTAGTTCAGCCACACACTTCAGCTTCTGCAATTTCGTCTTCCTCCGCCTCATTCTACAGAAGTTCTTTTCAGCAACTCCGTTCGCGGACCACGACCCTTGATCTTCGGAACAGCCACTCCATCCCTCATCGTTCCACTTGCAGAGCTTCCTGGCAGGAGCTTGCAGGGGTTCTGATATTCTCTGCAATTCCTTTCACGGCGGTGAAAGCCATCGCCAATAGTCCACTTGGAGAGTCGCTCCAGAGACAATTGGAAAAGAAGAAAAAAGCTGCCGTAGCCAACTCTTCGAAGTTCAAGGCTCTTGCTGAGGAGGCTAGAAAAGATAGCTCATGGTATGGAGAAGGGCGTCCTCGGTGGCTTGGTCCACTACCATATGATTATCCAAAATATCTGACAGGTGAAATGCCTGGTGATTATGGATTTGATATTGCAGGTTTGAGTGAGGATCCTGTGGCTTTTCAGAAGTACTTCAACTTTGAAATACTGCATGCTCGTTGGGCTATGTTAGCATCCCTTGGAGCTTTAGTTCCAGAAATCTTAGATATTTTTGGAGCTTTTCATTTTACTGAACCCATCTGGTGGCGAGTGGGCTATTCAAAACTTAAGGGAGATACACTCGACTATCTTGGAATACCAGGGCTTCATTTAGCTGGAAGCCAAGGAGTGATTGTCATTGCAATTTGCCAAGCTATTTTGATGGTTGGACCCGAATATGCAAGATATTGTGGCATTGAGGCATTGGAGCCTCTGGGAATATATCTGCCGGGGGATATAAATTATCCAGGTGGTGTGTTGTTTGACCCCTTGAATCTGTCCAAGGATGCTGCAGCCTTTGAGGAACTAAAAGTAAAAGAGATTAAAAATGGGCGTTTAGCCATGGTTGCCTGGCTAGGATTTTACAGTCAAGCTGCTTTGACGGGTGAAGGCATAGGGCAGGATGCAATTTTTAGGGTGCTGGACCTTCTGGTGAACGTGAGGCGAGCCTATTCGAGAATGATTTGTTGGGTTGCAATGGAGCCAGGTGTAGGTCTACTGTTCTCAAGATCTGCATCTGCGAATCTCCCACATTCATGTCTCCTACTCGATGATCTTCTCTACTCGATCTGCCAAATTCAACTCACTCCTCCACTTCTGCTTCAGGTAACTCTCTCTCCTTCAGCAATCTCCCTCTGTGATTGCCTTTGGGAGTGTTTGCTTCTTTCATCCGAAATGATGGCTGACATGGATGTGCTCGCTGACACATCTGAGGTTAACGAGAAGTGTGCCTTGGATATGAGTACCTACGAGAATTTGCCTAAAGGTTGCAATGCAGCATCTCTTCACTGTGCTACTCCCATTCCTAAGGATGATACCGACGGTTCTTACGTTTTCGTTAGCTCCACCGATGCTGCTACTTCCGATGATCACGTTGCTTCGGATCTTAATGGGCAAGCAGAGTGTTCTCAGAATGTTGATACGGAGATCATGGTTCGTAATCGGGAATTGAATACTGACGTCGGTAGGAAACCTGAATCAATTATCGTTTCCGATGCATTGGAGGATTCCCAATTCGAATTTTCTGAGCATGTGAAAGAGAATGACGCAATTCAGGATGAGATCAGAGTGGCGGATGTCCTTCAATCTTCCGACGCCAAGGTGGATGAAGCGGAACCTGGACTGGATTCTTCTCAGACGGTGGAAGAAACTCGAATCCTAGAGGACCAGACTATCAACGTATCTTTTGATGCAGAGACAAATTCTGGCGAAATCCATGGGGTACAGTCTCCTCAAGCAGTTGAAGACAATCAGATTCAGGAGGAAAATCAAAGAATTTCTACCTCTGGATCTTCTAACACCGATGCAAATCGTTGTGGAGAAATCGAGGTGGAGTCTTCCCAAATGGCGGAAGATATTAACAGTCATGAGGATAACGGAATTGTGAAAATCATGAAGTCTTTTGATACCGAAACAAATCATGTGATAAACATCGAGGCGGAGTCTTCTCCGAAGGCAGACGGCATCGAGATTCACAAAGAAAATGGAACGGTTGCAATCAAGTTTTCTGATTTTGACTCAAACCCTGGGGAAGAAATTGAGGTGGAGTCTTCTCAGAAGGCAGACGACATTCAGAATCACGAGGAAAATGGCATAATGAAATCCTCTTCTGATACCGAGGCAAACCCTAGGTCAGAAATTGAGGTGGAGTCTTCACGGGAGGTTGAAGACATTGAGATTCAGGAGCAAGATGAAGTAGTGGATGCCATCAAATCTTCTGCTACAGTGGAAAAGCGTGGGCAAGAAGGAGAAGTAATCCCCGAGTATAATGACACAGTGGCTATCAATGAATTGTCTGATACCATACATAACAGCAGTAAAGAAACTGAGATGGAATCTTTCGAGAGAGAGGAAGGCATTCGAGAGTCAGAAGATGCAAATTTGGAGGCTGCTGACTGCCATTATGTTAATGGCAAAGAGAAGGTTGATGAGATGGTAAATAAAGCTGTGATAAGCGACCCTGTGGGAGGAATAGGAGAATCTCAAATTATAAGTATGGGTGCTGCTGAATCTGACCTAGATGATTCTGATGATACCGTGGAAGATGTTAAGAGGGAATGTACATCAGGGGTTGCCTTGAATGAGGAGAACTCTAAGAAAACTCAATTAACAATTAGTCAGGATGGTGAACATTACCAGGTTGTTGGCGAGGAACAAGAAAATTTAAACAATGAAGTTTCTCTTTTAGAGCCATCAGAAGAAAACAAAGTGGACATGGAGCAGCATTTGGCAGCAGCTCCTAGTCCACTGGTCAGTTCAGAAGACATAAATGGTTCTATCTCCATTAGCACGGAAGATGGCTTGCCAACTAGTATGGATCAAGATGCCCCCTTGGGAACTATTGATGACAAAGACACTGTAGCTAACAGGACCAACTTCCATGACCATTCTGAATCCTCATCTGGCTCTGTAGATTGTGATGTCGCTACTGTTGAAACTCATCAATTATCTCCTGAGATGCTTATTAGTGATCCAATAGAGTTAAATGAGATTTCTGTGAATGATGAACAAGAGGTGAATCATGTGTTGGAACTAGAAGAGAATTCAGAAATGGCATCTCATCCTAAAATAGATGAATGTGTCAAGGTTGAAGTTTTGGAAGGTACGGTCTCTGGAAATGGAGATGAGGTGCCCACTGCATTCGACGAATCTAGAATTTCTTGTGGTGATGACTTTGTTGCTGGCAGTCAATTAATCGCCGGGGGCACTGAACCAGTGGAAAGCATTGACACGGTATCTGCTGTTGTGATAGGAAATACTTCAATTGAAATAAGGGAACTGGGCTCTACGAATTGTCCTAATGATCCAGTAGTGAGATCCAATCTTGATGTTGAGGATTGTAAAGTGTCTGAAATTGTGGCTTCTGTGGGTGATGTTGTCCGAGCGGATAAAGAAGTCAGGGCAAATCATGAGGTTGATTTTCTTGGTAACTCTAATTTTGAAACCAAGTGTGAGAATGGTCGCGTCGAAAAAGATCACCAAGGAACTTTCCATAGTAATGATTTTACGTCAATTGAATATCAAGAAAGAGGTTCCACTGTTCCTGAAATTCCTAATGGTGTCAATAAATCTTCTGCAATTCAACTAAGTTCTGCTGTTGCAACAGACTCGGAATTGCATGATAATGGAAGTTGCTCAATTCCTATTGCTAATAAGAAATCAGGAGACGACATCAAGATTCCATCCTCCAAAGGAGGTGGTAGCAGAAATATATCTGGCGATGATGTCAGTGTGTCAAAAACTGATGTTGTTCTCAAGGGTTCTATAGTAAACGATGAAGGGAATCTGAACTCAACGTCTGATGTTGTCTCTGAAACTGATGATAAGCCGGCAACAGAAGAAACTCAGGTCATTCATGAGGGTTGCCAGAATGAACCTTCACCTATTTCTCCAGAAGGTTCTGGTGACACTATAACGGGGCAAAATGTAGGGGTTGAGGCAGGAACAAGGCCGTTTAACTTTTTGGTTAAGGTACCTAGATTCGATGACAAAAATATAAGAGAGCAGATTAAGTGTGCTCAGACAGAAGTTGATTGGAAGACAAAGGATCGAGATGCCATTCGGGTTCAAATACAGACAATGAGGGCTGCATGGAAAGTGTTGAGTGATAATCTTGAAGCAGCCGTGTCGGAAGGAAGAGCTGCAAGAGACTTGCTCAAGTCAAAAAGACTGGAGATAGACTCTGTTCAATCAGTGATAACAAAAGTGAAGAATGCCATGTCTGTTGAGGATATTGATGGCAGGATACGCAACATTGAACATATGATAGAGCATGAAACACTGCCATTAAAAGAAGAAAAACAATTAATTCGTGAAATCAAGCAATTGAAGCAGCTGCGGGAACAGCTTTCATCAACTATGGGTAAGCAGGATGAGCTTCAACAGGCATTGGACCAGAAAGACCAGATTGAAGAGCGCCTTAAGCTATTAAGAAAGGAGATGGATTTACTGAGAGACAATGTTGTGAAAGCTGAATCAGTTATAAAGGCTGCCAAGAAGAAATATAATGATGAAAGCATTAAGCTGGATGAATTGCAATCCCAGTTTAAAGCAGCAGATAAGATTCGCCAAGAAGCATATGCTAATTTACAGAGTATGAGGAAGCAATTATATGAGAAGAACAAATACTGCTGGAAGTATCGGGATGACGCAAAGGAAGCCAATGAAATAGCGTCAAGTCGAGATCTAGAGAGACTGCAACATTTTTGTGTTAATCAGGTGGAGCGCATGATGGAACTGTGGAACACAAATGCTGAGTTCAGGGAAGAATATATTAAGAGCAACATGAGGAGTACCCTGAGGCGACTAAAGACATTGGATGGCCGCTCCCTTGGCCCTAATGAAGAGCCGCATGTACTGAATCTCGTTGTTAAGGAGGGACCAGCGAGGGACAATTCTCTTTCAACGGTTTCAACAACGCAGGAATCTGAAAAACTGATACCCGCTGATGATGCGAGAGATAATGACAAACCAGGGACCAAAGTAGCTGAAACGAAGAATCAAATGACAAAAAGGAAGAAGCCTGAAACAGTTATGGCTTTAGTGAATGACCCTAGGAATATCTCTAGCGAGAACGAGGTAGAAGAGCCACCACGACCGGAGGAGATTAAGCGAACAAGAGAGGAAGAGGAGCTGGCGGCAAAAGCAGAAGAGTTGAGAAAGGAAGAGGAAGCAAGGAAGTTGAAGGAGCAACGGAAGTTGGAAGAGAAGGCCAAAGCCAAAGAGGCGTTGGAGAGGAAAAAAAGAAATGCTGAGAAAGCCCAGGCCAGGGCAGTAATCAAAGCACGAAAAGAGGCAGAAGAGAGGGAGAAGCTAAGGGAGAAGAGAGCAAAAAAGAAGGAAAGGAAGATGGCAGCTGAGACGGAAGCTGGAAATGGTTGGGATGAAAGGGAAGCTGCTTTAGTCACCGAAAAGCCTTCAGAAGCTCCGAAGGAGGAGTCTGAAAACACAGGTAAACAGGGGATGGCACTGGCAGCGAAGAGGCCTCTAAAAGCGTCGCAGTACACAAAGCAGAGCAAGACAAAGTCAATTCCTCCGCCACTTCGAAATCGTGGTAAGAGGAGGATGCAACCATGGATGTGGGTTCTTCTGACAACCGTGGTTGTTTTTGCGCTGTTCTTCGTTGGACAACAACGGCTGCTCTACTAG | 5730 | 44.15 | MRFRSVITPLSGMAMALVQPHTSASAISSSSASFYRSSFQQLRSRTTTLDLRNSHSIPHRSTCRASWQELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKKAAVANSSKFKALAEEARKDSSWYGEGRPRWLGPLPYDYPKYLTGEMPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGEGIGQDAIFRVLDLLVNVRRAYSRMICWVAMEPGVGLLFSRSASANLPHSCLLLDDLLYSICQIQLTPPLLLQVTLSPSAISLCDCLWECLLLSSEMMADMDVLADTSEVNEKCALDMSTYENLPKGCNAASLHCATPIPKDDTDGSYVFVSSTDAATSDDHVASDLNGQAECSQNVDTEIMVRNRELNTDVGRKPESIIVSDALEDSQFEFSEHVKENDAIQDEIRVADVLQSSDAKVDEAEPGLDSSQTVEETRILEDQTINVSFDAETNSGEIHGVQSPQAVEDNQIQEENQRISTSGSSNTDANRCGEIEVESSQMAEDINSHEDNGIVKIMKSFDTETNHVINIEAESSPKADGIEIHKENGTVAIKFSDFDSNPGEEIEVESSQKADDIQNHEENGIMKSSSDTEANPRSEIEVESSREVEDIEIQEQDEVVDAIKSSATVEKRGQEGEVIPEYNDTVAINELSDTIHNSSKETEMESFEREEGIRESEDANLEAADCHYVNGKEKVDEMVNKAVISDPVGGIGESQIISMGAAESDLDDSDDTVEDVKRECTSGVALNEENSKKTQLTISQDGEHYQVVGEEQENLNNEVSLLEPSEENKVDMEQHLAAAPSPLVSSEDINGSISISTEDGLPTSMDQDAPLGTIDDKDTVANRTNFHDHSESSSGSVDCDVATVETHQLSPEMLISDPIELNEISVNDEQEVNHVLELEENSEMASHPKIDECVKVEVLEGTVSGNGDEVPTAFDESRISCGDDFVAGSQLIAGGTEPVESIDTVSAVVIGNTSIEIRELGSTNCPNDPVVRSNLDVEDCKVSEIVASVGDVVRADKEVRANHEVDFLGNSNFETKCENGRVEKDHQGTFHSNDFTSIEYQERGSTVPEIPNGVNKSSAIQLSSAVATDSELHDNGSCSIPIANKKSGDDIKIPSSKGGGSRNISGDDVSVSKTDVVLKGSIVNDEGNLNSTSDVVSETDDKPATEETQVIHEGCQNEPSPISPEGSGDTITGQNVGVEAGTRPFNFLVKVPRFDDKNIREQIKCAQTEVDWKTKDRDAIRVQIQTMRAAWKVLSDNLEAAVSEGRAARDLLKSKRLEIDSVQSVITKVKNAMSVEDIDGRIRNIEHMIEHETLPLKEEKQLIREIKQLKQLREQLSSTMGKQDELQQALDQKDQIEERLKLLRKEMDLLRDNVVKAESVIKAAKKKYNDESIKLDELQSQFKAADKIRQEAYANLQSMRKQLYEKNKYCWKYRDDAKEANEIASSRDLERLQHFCVNQVERMMELWNTNAEFREEYIKSNMRSTLRRLKTLDGRSLGPNEEPHVLNLVVKEGPARDNSLSTVSTTQESEKLIPADDARDNDKPGTKVAETKNQMTKRKKPETVMALVNDPRNISSENEVEEPPRPEEIKRTREEEELAAKAEELRKEEEARKLKEQRKLEEKAKAKEALERKKRNAEKAQARAVIKARKEAEEREKLREKRAKKKERKMAAETEAGNGWDEREAALVTEKPSEAPKEESENTGKQGMALAAKRPLKASQYTKQSKTKSIPPPLRNRGKRRMQPWMWVLLTTVVVFALFFVGQQRLLY | 1909 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 31705853 | 31726004 | + | ClG42_11g0209300.10 | Clacu11g2093 | 262970 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu11g2093 | 1909 | MobiDBLite | consensus disorder prediction | 724 | 748 | - | - | |
Clacu11g2093 | 1909 | MobiDBLite | consensus disorder prediction | 1656 | 1879 | - | - | |
Clacu11g2093 | 1909 | Gene3D | Chlorophyll a/b binding protein domain | 134 | 336 | - | - | |
Clacu11g2093 | 1909 | MobiDBLite | consensus disorder prediction | 601 | 631 | - | - | |
Clacu11g2093 | 1909 | FunFam | Chlorophyll a-b binding protein, chloroplastic | 134 | 342 | - | - | |
Clacu11g2093 | 1909 | Pfam | Chlorophyll A-B binding protein | 144 | 319 | IPR022796 | - | |
Clacu11g2093 | 1909 | PANTHER | RNA-BINDING PROTEIN YLMH-RELATED | 1233 | 1901 | - | - | |
Clacu11g2093 | 1909 | Coils | Coil | 1460 | 1542 | - | - | |
Clacu11g2093 | 1909 | MobiDBLite | consensus disorder prediction | 1658 | 1672 | - | - | |
Clacu11g2093 | 1909 | MobiDBLite | consensus disorder prediction | 1232 | 1268 | - | - | |
Clacu11g2093 | 1909 | MobiDBLite | consensus disorder prediction | 1673 | 1706 | - | - | |
Clacu11g2093 | 1909 | MobiDBLite | consensus disorder prediction | 1716 | 1842 | - | - | |
Clacu11g2093 | 1909 | Coils | Coil | 1732 | 1816 | - | - | |
Clacu11g2093 | 1909 | SUPERFAMILY | Chlorophyll a-b binding protein | 126 | 331 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu06g0205 | Clacu-Chr6:2283845 | Clacu11g2093 | Clacu-Chr11:31705853 | 1.20E-07 | dispersed | |
Clacu10g1178 | Clacu-Chr10:24465764 | Clacu11g2093 | Clacu-Chr11:31705853 | 2.40E-42 | dispersed | |
Clacu11g1553 | Clacu-Chr11:26628799 | Clacu11g2093 | Clacu-Chr11:31705853 | 3.30E-23 | dispersed | |
Clacu11g1987 | Clacu-Chr11:30840200 | Clacu11g2093 | Clacu-Chr11:31705853 | 3.10E-25 | dispersed | |
Clacu11g2093 | Clacu-Chr11:31705853 | Clacu02g1889 | Clacu-Chr2:32393600 | 1.50E-45 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu11g2093 | - | - | - | 0.0 |