Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cma01g00095 ATGTTTTCGTCCATGAATCCTGTGCGAATTCGCACTTCGTTCTTCCTTCTCTACTTCTCCGTTCTTCTTCAACATCATTCCCTCTGTTCCTCATCTCCCTCGCCCTTAACTTGTACGGATACAACCCGTCTATGCACCTCGTTTCTGGCTTTCAAGCCTCAGCCAAATCAGACGCTTTCTGTGATCCAGAGTATGTTCGACGTATTGCCTGAAGATGTCACTGTCGAAGGCAATGGCCGGGACTATGTGTTCATCAGGAAGAATTGCTCCTGTGCCTCTGGATTGAAGAAATACATCACCAATACCACTTTTACCATCAAATCGAATCGGGGTTTTGTGTATGACATAGTCTTGGAAGCGTATGATGGGCTTGCGCTGTTGCCCAACACCACCCGAATGGCGAGGAACGGCGCTGTTGTGTCTTTGCGGCTGTTTTGTGCCTGTTCAAGTGGGCTGTGGAACTATTTGATGAGCTATGTGATGACAGATGGCGATACCATTCAGTCTTTGGCTAGCCGATTTGGGGTCAGTATGGATAGCATTGAGTCGGTGAATGGAATTCAAAATCCCAGCAATGTCACTGTGGGCGCTTTGTATTATATTCCCCTGAATTCGGTTCCTGGTGATCCTTATCCATTGGAGACGCACATTTCTCCTGCTCCTACTCCTGCTCCTTCCTATTCTCTCAACAATTTCTCAGATAATGCTGAGAACTCCAAGCGTCATCCTCCTTATATATGGATTGTTGGGAGTTTGGGAATTATTCTTGTTCTGATTTTATTAGGCATAGGAGGTTATGCTTGTTGTAGGTGGTCGAAATGCTTTTCTAGATTAAGGAGTAGCCACTCCAAGGATCCTGGTGCCAAGGTTTCACACAAGTTCCATATTCTTGGGAAGTCAAGTTTCTGCTGTGCTTCAGGAAGGTATATTTGCTGTAGTTCTGCAGATTGGAAACAACCCAGCAGGGAGTCGAGCGATAACCAGAGTGCAATTCCAAAAGCTATTGAGAGCAATGTATTCAATGTAGACAAACCTGTGGTTTTCTCCTGCGAAGAAATATTTTCCACGACCGATGGTTTCTCCGAGTCGAGTCTGCTTGGCCATGGAACTTATGGTTCAGTGTATCATGGCATCCTGCGTGACCAGGAAGTTGCTATAAAGAGAATGACTGCAACAAAAACTAAAGAGTTTCTGGCAGAGATGAAAGTCCTCTGCAAGGTTCATCATGCAAACCTGGAATATGCTCAAAAAGGTCCACTCAAAAGTCATTTACATGATCCTCTGAACAAGGGCCATACATCACTCTCTTGGATTATGAGACTCCAAATTTCTTTGGACGTTGCGAGAGGTCTCGAATACATTCACGAGCACACTAAACCTCATTATGTCCATAGAGATATCAAGACAAGCAACATCTTACTTGATGGTTCATTTAGGGCGAAGATTTCTGACTTTGGGTTGGCCAAACTTGTTGGAAGAACCAATGAGGGTGAAGCTACAGTAACGAAAGTTGTGGGTACATATGGCTATCTGGCTCCCGAATATTTGAGTAACGGACTTGCCACAACTAAAAGCGACGTGTATGCTTACGGTGTTGTTATTTTTGAGCTTATATCTGGAAAGGAGGCAATCATACGAACTGAGGGCACGACTTTGAAAAATCCTGAAAGACGTTCGTTGGCATCCATTATGCTAGGTGTTCTTCGTAACACACCCGATCCTATGAATATGGGAAGTCTAAAAGATCAAGTTGATCCAAGTATGATGGATTTGTATCCCCATGACTGTCTATTCAAGGTGGCGATGTTGGGAAAGCAGTGTGTGGATGAGGATCCCATGTTACGACCGGACATGAAGGAAGTGGTAATATCGTTGTCACAGATCCTACTGTCTTCAATAGAGTGGGAAGCGACTCTAGCTGGTAACAGCCAAGGGAGGCTTCCGGCGGCGATTAGGATGCCGATGAGGGGGAAATCAGGGAAGAAGCCACTGAGGGATGTATCGAACCAAAAATACGGCCGAACTTCCTCCAAATCTGTCGCTACAGCCAAGAGAAAGGAAGATGATTACATGTCTAAGGTTGAAGAGCAAGATGATTCTCTCGATCGTCTCCTTCTGGTTCAGTCCGATCTCTCAGCGTTCACTAATCAGATTGATGAACTTGTTGTGAAAGCATTTGAACTGAAGGAAATGGGCAAACAAGGGAGGAAACAGATCGAATCTTTCACTCATATCTTATCTGATATGCTATCTTCTTTGAAGCCATGGGTTCCCAGACTTCAGAAGGTGCTCTCGTCTCCATCAAAAGGTATTGATGGTGATATAGAACAACCCTTGTCTAGTGAAAGCAATGTGATGGTTAACGATACGGAAAACAGTGTTATTGACAGCCCAGGCCAAGCTGAAGTTCGAGATCTGATCTCTCCTTCACCCCTCGTATCATGGCGTGCTGGATGCAATATTGAGAGAGGAAGACAATTGTTTTTACTCACACCTCTTCCTATTTCTAAATCACTCTCATCTAAACATGTGAAATATTATAAATCTGCACTTAGTGGAATGACTTCGAGCATACTCGAGGGCGCACAACCATGTTTTGTTGCATGTGCAGATTTAAACGAGAATGAACTTGAAGGTAAAATACTTGAGCCTGGTAAGCCTTCTGGTCCTGATTTAACAACACTAGGGGAGAATCTGCTTGAAGGTAATGGAATTGCGCCAAGTACTGGTAAGCCATCTGGGTCTAATTTAACTAAACTGGGGGAGAATTTGTTAGAAGGTAGTGGAATTGTGCTTAGTGGTGTTGAGCCTTCTGGGTCTGATATAGCACAAGTTGAGATAACTCATCAGCGTGGATTTGCTTCCCCACCTATGTTATCAAAGAAAAATTGCTCTATGCTAGTTATGACTCCCTGCTTAAAAATGTCGCCTCCAAAATCTTGTGTGCTGCTCGAACCCATTTCTGAGTCATCACATAAAGACAAAAAAATGGTTTATAAGGCCACACCTTTTCCCGTTGGGGTTCAGGATTACTCCTCTGGCGGTGACGCTTCTGATGGACTGGCTTTAAAGTACCCAGAACTCTTGGGAATTCAACAGGCTCACAAATTAGAAATTAGAAAGGAGGTTGAAGCCTCACCAGACTGGTTTATGTCACCTCCAAAAACATGTGTTTTACTGGAGCCGTCTGATTTTCATTCAGTGAAAAGTGCTGCTTGTTACGGATGTCAGGAAGCCAAGAAATCTTTCGGCGACGAAGGTCCAGTTGGGGTCAGCTTGCCGCACATAGATAGCACTCCCATGTTGAAGGAATGTGAAAGTGTATTTCGGGTTGGCAAACGTGCTGGCGAAGAGACTCTTAAAAAAGAACTCTGGCTGAAATTTGAAGCAGCATCAGCCAATCCATATCGTTTTGATCAAGCTCTTCAAAAGACATCAAAGAAAGGTTTCCTGGACATGCTGGACGAGTTGCGGAACTGCTGTTACAACTTGGAAGTGCGAACCGGGAAGGGCATTGCATTAGATGTTGCGCTTGTGCATTCCTCGGCC 3549 44.41 MFSSMNPVRIRTSFFLLYFSVLLQHHSLCSSSPSPLTCTDTTRLCTSFLAFKPQPNQTLSVIQSMFDVLPEDVTVEGNGRDYVFIRKNCSCASGLKKYITNTTFTIKSNRGFVYDIVLEAYDGLALLPNTTRMARNGAVVSLRLFCACSSGLWNYLMSYVMTDGDTIQSLASRFGVSMDSIESVNGIQNPSNVTVGALYYIPLNSVPGDPYPLETHISPAPTPAPSYSLNNFSDNAENSKRHPPYIWIVGSLGIILVLILLGIGGYACCRWSKCFSRLRSSHSKDPGAKVSHKFHILGKSSFCCASGRYICCSSADWKQPSRESSDNQSAIPKAIESNVFNVDKPVVFSCEEIFSTTDGFSESSLLGHGTYGSVYHGILRDQEVAIKRMTATKTKEFLAEMKVLCKVHHANLEYAQKGPLKSHLHDPLNKGHTSLSWIMRLQISLDVARGLEYIHEHTKPHYVHRDIKTSNILLDGSFRAKISDFGLAKLVGRTNEGEATVTKVVGTYGYLAPEYLSNGLATTKSDVYAYGVVIFELISGKEAIIRTEGTTLKNPERRSLASIMLGVLRNTPDPMNMGSLKDQVDPSMMDLYPHDCLFKVAMLGKQCVDEDPMLRPDMKEVVISLSQILLSSIEWEATLAGNSQGRLPAAIRMPMRGKSGKKPLRDVSNQKYGRTSSKSVATAKRKEDDYMSKVEEQDDSLDRLLLVQSDLSAFTNQIDELVVKAFELKEMGKQGRKQIESFTHILSDMLSSLKPWVPRLQKVLSSPSKGIDGDIEQPLSSESNVMVNDTENSVIDSPGQAEVRDLISPSPLVSWRAGCNIERGRQLFLLTPLPISKSLSSKHVKYYKSALSGMTSSILEGAQPCFVACADLNENELEGKILEPGKPSGPDLTTLGENLLEGNGIAPSTGKPSGSNLTKLGENLLEGSGIVLSGVEPSGSDIAQVEITHQRGFASPPMLSKKNCSMLVMTPCLKMSPPKSCVLLEPISESSHKDKKMVYKATPFPVGVQDYSSGGDASDGLALKYPELLGIQQAHKLEIRKEVEASPDWFMSPPKTCVLLEPSDFHSVKSAACYGCQEAKKSFGDEGPVGVSLPHIDSTPMLKECESVFRVGKRAGEETLKKELWLKFEAASANPYRFDQALQKTSKKGFLDMLDELRNCCYNLEVRTGKGIALDVALVHSSA 1183
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 434823 442033 + CmaCh01G000950.1 Cma01g00095 285788
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cma01g00095 1183 Gene3D Transferase(Phosphotransferase) domain 1 416 638 - -
Cma01g00095 1183 PANTHER BNAA06G02020D PROTEIN 37 644 - -
Cma01g00095 1183 SMART LysM_2 158 202 IPR018392 -
Cma01g00095 1183 SMART serkin_6 360 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma01g00095 1183 SUPERFAMILY Protein kinase-like (PK-like) 341 625 IPR011009 -
Cma01g00095 1183 Gene3D Phosphorylase Kinase; domain 1 332 414 - -
Cma01g00095 1183 Pfam LysM domain 163 196 IPR018392 -
Cma01g00095 1183 Gene3D LysM domain 154 207 IPR036779 -
Cma01g00095 1183 MobiDBLite consensus disorder prediction 654 689 - -
Cma01g00095 1183 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 37 644 IPR044812 GO:0019199|GO:0045087
Cma01g00095 1183 SUPERFAMILY LysM domain 157 202 IPR036779 -
Cma01g00095 1183 CDD LysM 158 201 IPR018392 -
Cma01g00095 1183 Pfam Protein tyrosine and serine/threonine kinase 364 623 IPR001245 GO:0004672|GO:0006468
Cma01g00095 1183 ProSiteProfiles Protein kinase domain profile. 360 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma01g00095 1183 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Cma01g00095 1183 ProSiteProfiles LysM domain profile. 157 201 IPR018392 -
Cma01g00095 1183 ProSitePatterns Protein kinases ATP-binding region signature. 366 387 IPR017441 GO:0005524
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Cma01g00095 Cma14g01290 CST
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g00095 Cma-Chr1:434823 Cma04g01752 Cma-Chr4:8816601 9.06E-100 dispersed
Cma01g00095 Cma-Chr1:434823 Cma14g01290 Cma-Chr14:10198619 0 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68241 PF07714 PK_Tyr_Ser-Thr 8.30E-35 CL0016 Cma PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma01g00095 - - csv:101213624 1125.54