Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma01g00107 ATGGCTTCCTTAGCAACACTAGCCGCCGTTCAGCCGGTTGCCGTAAAGGGTCTTGGTGGAAGCTCCCTTGCCGGGACCAAGCTGCCCCTCAGGCCCTCTCGCCAGACCTTGACGCCCAAGAACTTCAAGGCTGGTGCTGTGGTGGCTAAGTATGGTGACAAGAGCGTTTACTTTGATTTAGAGGATTTGGGTAACACTACTGGACAGTGGGATTTGTATGGATCTGATGCTCCTTCACCTTACAATTCTCTTCAGAGCAAATTCTTTGAGACCTTTGCTGCTCCATTCACCAAGAGAGGATTATTGCTCAAGTTCTTGCTACTTGGTGGTGGTTCCACTTTAGCTTATTTCAGTGCCACTGCCCCAGATGACGTTCTTCCAATCAAGAAAGGACCTCAACTTCCACCCAAACTCGGCCCGCGTGGCAAGATCTAA 435 50.34 MASLATLAAVQPVAVKGLGGSSLAGTKLPLRPSRQTLTPKNFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLLLGGGSTLAYFSATAPDDVLPIKKGPQLPPKLGPRGKI 144
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 495666 496734 + CmaCh01G001070.1 Cma01g00107 285800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma01g00107 144 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT VI-1, CHLOROPLASTIC-LIKE 1 144 - -
Cma01g00107 144 Gene3D - 98 120 - -
Cma01g00107 144 Pfam Photosystem I reaction centre subunit VI 7 144 IPR004928 GO:0009522|GO:0009538|GO:0015979
Cma01g00107 144 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT VI-2, CHLOROPLASTIC 1 144 IPR004928 GO:0009522|GO:0009538|GO:0015979
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma01g00107 Cma14g01305 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g00107 Cma-Chr1:495666 Cma14g01305 Cma-Chr14:10283301 3.13E-81 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma01g00107 K02695 - csv:101223219 270.781