Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma01g00163 ATGAAACTTGAGCCTCGACTTGAGTCTGCCGAAGCTTTAGCTTCTGGAGAAAGCGATTCATCATCCGAAATAGAACCTTTATTGACACCATCTTCCTCATCTACAAATCTTAAAGGTTTCTATGAGAATGATGATGATGGATCAGATGCAGAAACACTTCTTGCTTTAGGAGAGGGGGCCATTCATAAGGAGAAGAGAAGACCTAAAAGAGGGGAAGATTTCAATTTCCATGAAGCTGTTATCAAAGCTGATTTTTGGCTGCTTTGGTTCTCGTACTTCCTCGGGGTCGGTCCGGGAATAACGATTCTCAACAATTTGTCTCAAATTGGGATTTCTTTAGGTGTTAACGACACGACGTTGCTGTTGGCTCTTTTCAGCTTATGCAACTTTATCGGTCGTTTAGGCTCTGGTGTTATTTCTGAACACTTCGTCAGGTCAAGAATGATACCTCGCTCGCTGTGGATGATGTTTGCACTGATACTCATGGCAATAGCATTCCTCCTATATGCGTCTGGCCTCACGGGTACTCTCTACATTGCCACAGGTTTCACTGGTATCAGTTTTGGAGTTCTATATTCTATGATGATCCGTATGGCATCTGAGATTTTTGGCCTCAAGAACTTTGGAGTGATCTTAAACTTCATGCTGCTGGGGAATCCAATTGGAGCAGCTCTTTTCTCAGTTTTTCTAGCCAGTATTTTATACGACAATGAGGCTGCGAAGCAAGGTTCGATAACCTGCATCGGCCAACAGTGTTTTAGAATCACTTTTTTCGTTCTTTCAGGCGTGGGGGGGTTCGGTTCGATCTTAAGCTTAATTCTTACGATTCGATTGAGGCCAGTTTATCGAATGCTTTACTCCAGTGGCTCATTCCGCTTGCCTCAAAGTTCAGTTCATTGA 900 43.22 MKLEPRLESAEALASGESDSSSEIEPLLTPSSSSTNLKGFYENDDDGSDAETLLALGEGAIHKEKRRPKRGEDFNFHEAVIKADFWLLWFSYFLGVGPGITILNNLSQIGISLGVNDTTLLLALFSLCNFIGRLGSGVISEHFVRSRMIPRSLWMMFALILMAIAFLLYASGLTGTLYIATGFTGISFGVLYSMMIRMASEIFGLKNFGVILNFMLLGNPIGAALFSVFLASILYDNEAAKQGSITCIGQQCFRITFFVLSGVGGFGSILSLILTIRLRPVYRMLYSSGSFRLPQSSVH 299
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 740019 740997 - CmaCh01G001630.1 Cma01g00163 285856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma01g00163 299 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 4 299 - -
Cma01g00163 299 Gene3D MFS general substrate transporter like domains 82 281 IPR036259 -
Cma01g00163 299 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 4 299 - -
Cma01g00163 299 MobiDBLite consensus disorder prediction 14 41 - -
Cma01g00163 299 MobiDBLite consensus disorder prediction 1 44 - -
Cma01g00163 299 SUPERFAMILY MFS general substrate transporter 63 280 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g00163 Cma-Chr1:740019 Cma15g00074 Cma-Chr15:358409 1.07E-57 dispersed
Cma01g00163 Cma-Chr1:740019 Cma14g01365 Cma-Chr14:10596292 6.42E-175 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma01g00163 - - mcha:111020929 453.751