Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma01g00163 | ATGAAACTTGAGCCTCGACTTGAGTCTGCCGAAGCTTTAGCTTCTGGAGAAAGCGATTCATCATCCGAAATAGAACCTTTATTGACACCATCTTCCTCATCTACAAATCTTAAAGGTTTCTATGAGAATGATGATGATGGATCAGATGCAGAAACACTTCTTGCTTTAGGAGAGGGGGCCATTCATAAGGAGAAGAGAAGACCTAAAAGAGGGGAAGATTTCAATTTCCATGAAGCTGTTATCAAAGCTGATTTTTGGCTGCTTTGGTTCTCGTACTTCCTCGGGGTCGGTCCGGGAATAACGATTCTCAACAATTTGTCTCAAATTGGGATTTCTTTAGGTGTTAACGACACGACGTTGCTGTTGGCTCTTTTCAGCTTATGCAACTTTATCGGTCGTTTAGGCTCTGGTGTTATTTCTGAACACTTCGTCAGGTCAAGAATGATACCTCGCTCGCTGTGGATGATGTTTGCACTGATACTCATGGCAATAGCATTCCTCCTATATGCGTCTGGCCTCACGGGTACTCTCTACATTGCCACAGGTTTCACTGGTATCAGTTTTGGAGTTCTATATTCTATGATGATCCGTATGGCATCTGAGATTTTTGGCCTCAAGAACTTTGGAGTGATCTTAAACTTCATGCTGCTGGGGAATCCAATTGGAGCAGCTCTTTTCTCAGTTTTTCTAGCCAGTATTTTATACGACAATGAGGCTGCGAAGCAAGGTTCGATAACCTGCATCGGCCAACAGTGTTTTAGAATCACTTTTTTCGTTCTTTCAGGCGTGGGGGGGTTCGGTTCGATCTTAAGCTTAATTCTTACGATTCGATTGAGGCCAGTTTATCGAATGCTTTACTCCAGTGGCTCATTCCGCTTGCCTCAAAGTTCAGTTCATTGA | 900 | 43.22 | MKLEPRLESAEALASGESDSSSEIEPLLTPSSSSTNLKGFYENDDDGSDAETLLALGEGAIHKEKRRPKRGEDFNFHEAVIKADFWLLWFSYFLGVGPGITILNNLSQIGISLGVNDTTLLLALFSLCNFIGRLGSGVISEHFVRSRMIPRSLWMMFALILMAIAFLLYASGLTGTLYIATGFTGISFGVLYSMMIRMASEIFGLKNFGVILNFMLLGNPIGAALFSVFLASILYDNEAAKQGSITCIGQQCFRITFFVLSGVGGFGSILSLILTIRLRPVYRMLYSSGSFRLPQSSVH | 299 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 740019 | 740997 | - | CmaCh01G001630.1 | Cma01g00163 | 285856 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma01g00163 | 299 | PANTHER | UNCHARACTERIZED NODULIN-LIKE PROTEIN | 4 | 299 | - | - | |
Cma01g00163 | 299 | Gene3D | MFS general substrate transporter like domains | 82 | 281 | IPR036259 | - | |
Cma01g00163 | 299 | PANTHER | MAJOR FACILITATOR SUPERFAMILY PROTEIN | 4 | 299 | - | - | |
Cma01g00163 | 299 | MobiDBLite | consensus disorder prediction | 14 | 41 | - | - | |
Cma01g00163 | 299 | MobiDBLite | consensus disorder prediction | 1 | 44 | - | - | |
Cma01g00163 | 299 | SUPERFAMILY | MFS general substrate transporter | 63 | 280 | IPR036259 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma01g00163 | Cma-Chr1:740019 | Cma15g00074 | Cma-Chr15:358409 | 1.07E-57 | dispersed | |
Cma01g00163 | Cma-Chr1:740019 | Cma14g01365 | Cma-Chr14:10596292 | 6.42E-175 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma01g00163 | - | - | mcha:111020929 | 453.751 |