Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma01g00269 ATGGAGGAAAATTTCGTTCCATTTCGTGGAATCAAGAAGGACCTTAAAGGGAGGTTGCTCTGCTACAAACAAGACTGGACTGGTGGATTCAGAGCTGGATATAGGATTTTGGCTCCCACTACTTACATATTCTTTGCCTCTGCTATTCCTGTCATTTCATTTGGTGAACAATTGGAGAGAAGTACTGATGGGGTGTTGACTGCAGTTCAAACCTTAGCCTCCACAGCTCTTTGTGGGATCATTCACTCCATTGTTGGAGGTCAACCTTTGTTAATCTTGGGAGTAGCTGAGCCTACTGTTATTATGTACACCTTCATGTTCAACTTCGCGAAGGAACGACCCGAGTTGGGTCGGAATCTGTTTCTAGCATGGAGTGGATGGGTGTGTGTTTGGACTGCAGCCTTGCTGTTCTTAATGGCTATATTAGGAGCATGTTCCATCATCAATCGGTTCACTCGTCTAGCCGGTGAATTGTTCGGTTTGCTTATCGCAATGCTTTTCATGCAGGAAGCGGTCAAAGGACTTGTGGATGAGTTTCGTATCCCGGAACGAGAAAATCCGAAGTTGATCGAGTTTATACCTTCGTGGAGGTTTGCCAATGGGATGTTTGCTTTGGTACTGTCGTTTGGCCTTCTACTCACTGCATTAAGGAGTCGAAAAGCTCGGTCATGGCGATATGGATCTGGTTGGCTCAGAAGCTTGATAGCAGACTATGGAGTGCCGCTCATGGTTCTTGTTTGGACAGGTATATCTTTCATTCCGTCGAAAAATGTCCCACAAGGTATCCCGAGACGACTCTTCAGCCCGAATCCATGGTCTCCTGGTGCGTATGAGAATTGGACTGTTATTAAGGATATGCTCGACGTTCCAGTCCTTTATATCTGTGGAGCGTTCATCCCGGCTACGATGATTGCGGTGCTTTACTATTTCGACCATAGTGTTGCATCTCAACTTGCTCAGCAGAAAGAGTTTAATTTGAGGAAGCCATCTTCTTACCATTATGATTTACTTCTCTTGGGATTTTTGACCTTAATATGTGGCCTTCTTGGAATTCCTCCTTCTAATGGAGTCATCCCACAATCTCCGATGCATACGAAGAGCCTAGCTACTCTCAAACACCAGTTGCTACGGAATAAACTTGTAAAAACGACACAGTGTAGTATGAGAAAGAATGCTAGCTTGGGACAATTGTATGGAAGTATGCAAGAAGCATATCATCAAATGCAGACCCCCCTGATCTACCAACAGCCCGCATCTCGTGGACTGAATGAGCTAAAAGAAACAACGATTCTCGCAGCTTCTAGTATGGGCAGTTTCGATGCTCCGGTCGATGAGACGGTATTCGACATTGAAAAGGAAATCGATGATCTATTGCCTGTCGAGGTGAAAGAACAGCGTGTCAGTAATTTGCTTCAAGCTGCAATGGTTGGAGGATGCGTTGCAGCCATGCCTGTCTTGAAAAAGATCCCGACCTCGGTTCTATGGGGTTACTTCGCGTTTATGGCCATCGAAAGCTTGCCCGGTAACCAGTTTTGGGAAAGAATCTTGTTGCTCTTCACTGCACCCAGTAGAAGATACAAAGTTCTTGAGGATTACCATGCGACATTCGTCGAAACCGTGCCATTCAAATCCATTGTACTTTTTACCATTTTCCAAATTGTATATTTGTTCATATGTTTTGGACTAACATGGGTTCCGATCGCCGGGGTCATGTTTCCTTTGATGATCATGCTCCTCGTCCCGGTACGACAATACCTTCTTCCCAAGTTCTTCAAAGGTGCACATCTCCAAGATCTCGATGCAGCTGAGTACGAAGAAGCATCGGCTTTACCGTTCAACCTTGCTACGGAAGCCGAGCTGGGAGCTGGAGCCTCATTTGGTGGCGATGGGGAGATTTTAGATGATGTTATCACACGAAGCCGTGGCGAATTTAGGCATATTAGTAGTCCTAAGATCACAAGCTCCATGGCATCACCAAGATGTGAGCGAAAGAGTTTCGAGAGCCCTCGGGTGAGCGAGCTTAGAGGAGTGCAAAGTCCTCGAGCCGGGGGACGAGGAACACCATCGTCCGGTCTGGGAAAGAGCCCTCTTAAGAACACAGCATCAAAGTAG 2112 46.16 MEENFVPFRGIKKDLKGRLLCYKQDWTGGFRAGYRILAPTTYIFFASAIPVISFGEQLERSTDGVLTAVQTLASTALCGIIHSIVGGQPLLILGVAEPTVIMYTFMFNFAKERPELGRNLFLAWSGWVCVWTAALLFLMAILGACSIINRFTRLAGELFGLLIAMLFMQEAVKGLVDEFRIPERENPKLIEFIPSWRFANGMFALVLSFGLLLTALRSRKARSWRYGSGWLRSLIADYGVPLMVLVWTGISFIPSKNVPQGIPRRLFSPNPWSPGAYENWTVIKDMLDVPVLYICGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTLICGLLGIPPSNGVIPQSPMHTKSLATLKHQLLRNKLVKTTQCSMRKNASLGQLYGSMQEAYHQMQTPLIYQQPASRGLNELKETTILAASSMGSFDAPVDETVFDIEKEIDDLLPVEVKEQRVSNLLQAAMVGGCVAAMPVLKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRYKVLEDYHATFVETVPFKSIVLFTIFQIVYLFICFGLTWVPIAGVMFPLMIMLLVPVRQYLLPKFFKGAHLQDLDAAEYEEASALPFNLATEAELGAGASFGGDGEILDDVITRSRGEFRHISSPKITSSMASPRCERKSFESPRVSELRGVQSPRAGGRGTPSSGLGKSPLKNTASK 703
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1274009 1278053 - CmaCh01G002690.1 Cma01g00269 285962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma01g00269 703 Pfam HCO3- transporter family 7 179 IPR011531 GO:0006820|GO:0016021
Cma01g00269 703 Pfam HCO3- transporter family 460 550 IPR011531 GO:0006820|GO:0016021
Cma01g00269 703 Pfam HCO3- transporter family 202 373 IPR011531 GO:0006820|GO:0016021
Cma01g00269 703 Gene3D Helical hairpin bin 18 60 - -
Cma01g00269 703 MobiDBLite consensus disorder prediction 653 703 - -
Cma01g00269 703 PANTHER ANION EXCHANGE PROTEIN 1 687 IPR003020 GO:0005452|GO:0006820|GO:0016020
Cma01g00269 703 PANTHER BORON TRANSPORTER 2-RELATED 1 687 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma01g00269 Cma14g00951 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g00269 Cma-Chr1:1274009 Cma13g00886 Cma-Chr13:7162122 0 dispersed
Cma01g00269 Cma-Chr1:1274009 Cma14g00951 Cma-Chr14:4928445 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma01g00269 K24194 - csv:101205388 1300.8