Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma01g00363 ATGGAGAATTGGATGGGTCTACTTAGAATTCATGTGTGTAGAGGAATCAATCTTGCTATAAGAGATGTTCGTGGGAGTGATCCTTATGTTATTTTGAAGATGGGTAAAAAGTTTGTATATGATAAGGACTGGTTTTCACTAGATGACAAGATGGGTGATGTGGAGATCGACGCTCGTCCGTTCATGGAAGTTGCTAAGATGAAACTAAACAACCTTTCGAATGGAACCATCATAAGAACGATTGAACCAAGTAAGAGCAATTGTTTGTCGGAAGAAAGTTACATCGTTTGGGAAAATGGAGAAGTTACTCAAAAAATGTTTGTAAGGCTAAGAAATGTGGAGTGTGGGGAAGTTGAGTTGCAATTGAAATGGATTGATATTCCTCGTTCTACACAATTATAG 402 37.81 MENWMGLLRIHVCRGINLAIRDVRGSDPYVILKMGKKFVYDKDWFSLDDKMGDVEIDARPFMEVAKMKLNNLSNGTIIRTIEPSKSNCLSEESYIVWENGEVTQKMFVRLRNVECGEVELQLKWIDIPRSTQL 133
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1803784 1804518 - CmaCh01G003630.1 Cma01g00363 286056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma01g00363 133 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 1-LIKE 37 131 - -
Cma01g00363 133 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 126 IPR035892 -
Cma01g00363 133 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 1-LIKE 1 37 - -
Cma01g00363 133 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 37 131 IPR044562 -
Cma01g00363 133 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 37 IPR044562 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma01g00363 Cma14g00837 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g00363 Cma-Chr1:1803784 Cma10g00328 Cma-Chr10:1510138 1.39E-48 dispersed
Cma01g00363 Cma-Chr1:1803784 Cma14g00837 Cma-Chr14:4298388 9.16E-63 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma01g00363 - - csv:101218477 188.348