Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma01g00385 ATGAATGATGGGTGGCTTTGGTTTGGAAATGGGGAGCTTCCAAGAAGAATCAGGAAGAGGATGGCCAAGCAAGGCGTTTATGGCCCTGACCCACGACCCTTCACCGGAAACATCCTCGATGTTGTAGAGCTTGTGAAGGAATCCATGGCTAATGACATGAGCTCCACCAGTCACGACATCGTTGATCGTTTGTTACCCTATTATTCTGCATGGACAAAGCAATACGGAAAGAGGTTTATATATTGGAACGGGATGGAGCCGAGGCTGTGTTTGACGGAGATGGAGTTGGTGAAGGAAATATTGGGGAAGAGCAGCAATGTGTGTGGGAGGTCATGGATGCAAAGGCAAGGGACCAAACACTTCATAGGGAACGGATTGTTGATGGCAAATGGAGAAGCTTGGCATCACCAACGTCACTTGGTTTCACCTGCGTTTAGGGGGGAAAGGCTGAAGAGCTACGCGGGGTTGATGGTGGAATGCACCAACAAAATGATCCAATCCTTGGAGACCCAATTGGAGGAGGGCCAGAGCGTGTTCGAAATTGCTGATTGCATGAAACGCCTCACCGCCGACATCATTTCCCGGACTGCGTTCGACACAAGCTCCGACAAAGGCATCCAAATCTTTGATATGCTCACTCAGCTTCAACACCTCTGCGCACAAGCCAGCCGCCACCTCTGCATCCCCGGTAGCCGGTTTTTTCCGAGTAAATACAACAGAAAAATAAAGGCACTAAAAATGGAGGTGGAGAGGATGTTAATGGAGATCATTGGAAGCAGAAAAGAGGGCGTGGAGATTGGAAGAAGCAGTGGATATGGAAGCGATTTGTTGGGAATGCTATTGAAGGAGATGCAGAGAAAGAGAGACGATGGATTCAGCTTAGACTTGCAGCTCGTAATGGATGAATGCAAGACTTTCTTCTTTGCTGGCCATGATACCACTTCTCTTTTGCTCAGCTGGACCATCATGTTGCTGGCTACTAACCCTTCTTGGCAACACAAGACTCGTGCTGAAGTAGCCCAAGTTTGCAATGGCCGACCTCCCTCGGTCGAACATCTCCCTAAGCTCACTTTGTCCCTAAGGCTTTACCCACCGGCCACAGTGCTACCAAGAATAGTGTTCAAGGACATAAAAGTAGGAGATTTAGAGATCCCGAAAGGGCTATCGGTATGGATACCAGTGCTTGCAATTCATCACAGCGAGGAGCTGTGGGGAAAAGACGCAAACGAGTTCAACCCAGAGAGGTTTGAGTCGAAAGCATTCAGTGGTGGGCGGTTCCTTCCATTTTCTAGCGGACCAAGGACCTGCATCGGGCAGGGGTTCGCGTTGATGGAAGCTAAGATCATATTGGCTATGTTACTCTCCAAGTTCAGCTTCACTATTTCCGACACTTATCGCCATGCTCCTGTTGTTGTTCTCACCATACAGCCCAAGTATGGAATTCAAGAGCCTCCTTTTCTTCCGAAAAAAGGGAAGGAGAAGTATCTTCTTCGGTGGATCCCTCTTGTTCTTGTTTAG 1518 48.55 MNDGWLWFGNGELPRRIRKRMAKQGVYGPDPRPFTGNILDVVELVKESMANDMSSTSHDIVDRLLPYYSAWTKQYGKRFIYWNGMEPRLCLTEMELVKEILGKSSNVCGRSWMQRQGTKHFIGNGLLMANGEAWHHQRHLVSPAFRGERLKSYAGLMVECTNKMIQSLETQLEEGQSVFEIADCMKRLTADIISRTAFDTSSDKGIQIFDMLTQLQHLCAQASRHLCIPGSRFFPSKYNRKIKALKMEVERMLMEIIGSRKEGVEIGRSSGYGSDLLGMLLKEMQRKRDDGFSLDLQLVMDECKTFFFAGHDTTSLLLSWTIMLLATNPSWQHKTRAEVAQVCNGRPPSVEHLPKLTLSLRLYPPATVLPRIVFKDIKVGDLEIPKGLSVWIPVLAIHHSEELWGKDANEFNPERFESKAFSGGRFLPFSSGPRTCIGQGFALMEAKIILAMLLSKFSFTISDTYRHAPVVVLTIQPKYGIQEPPFLPKKGKEKYLLRWIPLVLV 505
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1924037 1931714 - CmaCh01G003850.1 Cma01g00385 286078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma01g00385 505 Gene3D Cytochrome P450 14 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g00385 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Cma01g00385 505 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g00385 505 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g00385 505 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g00385 505 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g00385 505 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g00385 505 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g00385 505 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g00385 505 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g00385 505 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g00385 505 PANTHER CYTOCHROME P450 FAMILY MEMBER 14 485 - -
Cma01g00385 505 SUPERFAMILY Cytochrome P450 59 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g00385 505 PANTHER CYTOCHROME P450 FAMILY PROTEIN 14 485 - -
Cma01g00385 505 Pfam Cytochrome P450 68 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g00385 Cma-Chr1:1924037 Cma15g00184 Cma-Chr15:848309 0 dispersed
Cma01g00385 Cma-Chr1:1924037 Cma14g00810 Cma-Chr14:4097468 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma01g00385 K10717 - csv:101213604 770.0