Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma01g00440 ATGGCTGCCATGTACATCGATCCAAGGCTCAAACTCCAGATGGCCAAACCCCACCTTCAAAATGGAGCCACGTCAGAAGAGATTGAAGGGCTGATTCGAGTTTATGCAGATGGGCATGTTGAAAGGCCCCCAATCATCCCAAATGTAGCCTGCAGCACCACAGCATCAAACAAAGGCGTAACTGCAAAAGATGTTCTCATAGACATTTTCACAAACACTTGGGCGCGTATTTACATTCCTAACTCTCAGCGAAACCTCCCTTTGCTTGTTTACTTCCATGGCGGTGGCTTTTGCGTTGGCTCTGCCGCCTGGAGCTGTTACCATGAATTCCTCCTCAATCTTGCTTCCAAAGCAAAATGTGTAATCCTCTCAATCAACTATCGTCTTTCCCCTGAAAATCGCCTCCCCGCCGCTTATGAAGACGGATTCAACGCAGTCATGTGGTTGAAACAACAAGCAATAACCAACCCAATCGAACACAAATGGTGGTTAGGCAATTGCAATCCATCAAAATTGTTCCTCGCGGGCGATAGCGCTGGAGCAAACATAGCATACAACACCGCTACAAGGCTAGGGCACAACGAATCCACACTCCTAAAACCCCCAACTCTAAAGGGTATAATCCTAATCCAACCTTTCTTCGGCGGAGAATCGCGAACCAAATCAGAAAAGCTCGCCGCTACGCCCTCCTCCACCTCCGCGCTAACTCTCTCCGCCTCCGACACATACTGGCGGCTGTCCCTTCCGCCGACGGCCAATCGCGACCATCCATGGAGCAACCCACTGGTGAATGGCGGCGCAAAGCTGAAAGAAATGAAACTCCCACCATTAATGGTATGCATATCGGAGTTGGACATACTGTTGGACAGAAACTTAGAATTCTGTGCAGCCATGGCAGCCGCCGGGAAGAAAGTGGAGAGAGTGATTCTGAAGGGAGTTGGACATGGCTTCCAAATTCTGAACAAAGATCAGATCTCCACTCAGCGAACACAAGAACTAATGGGTTCCATTCGAGCTTTCATTCATCAACAATAG 1035 48.99 MAAMYIDPRLKLQMAKPHLQNGATSEEIEGLIRVYADGHVERPPIIPNVACSTTASNKGVTAKDVLIDIFTNTWARIYIPNSQRNLPLLVYFHGGGFCVGSAAWSCYHEFLLNLASKAKCVILSINYRLSPENRLPAAYEDGFNAVMWLKQQAITNPIEHKWWLGNCNPSKLFLAGDSAGANIAYNTATRLGHNESTLLKPPTLKGIILIQPFFGGESRTKSEKLAATPSSTSALTLSASDTYWRLSLPPTANRDHPWSNPLVNGGAKLKEMKLPPLMVCISELDILLDRNLEFCAAMAAAGKKVERVILKGVGHGFQILNKDQISTQRTQELMGSIRAFIHQQ 344
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2210879 2211913 - CmaCh01G004400.1 Cma01g00440 286133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma01g00440 344 Pfam alpha/beta hydrolase fold 89 318 IPR013094 GO:0016787
Cma01g00440 344 SUPERFAMILY alpha/beta-Hydrolases 30 343 IPR029058 -
Cma01g00440 344 Gene3D alpha/beta hydrolase 32 343 IPR029058 -
Cma01g00440 344 PANTHER CARBOXYLESTERASE 6-RELATED 15 342 - -
Cma01g00440 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 172 184 IPR033140 -
Cma01g00440 344 PANTHER ARYLACETAMIDE DEACETYLASE 15 342 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g00440 Cma-Chr1:2210879 Cma18g01034 Cma-Chr18:8611600 5.12E-129 dispersed
Cma01g00440 Cma-Chr1:2210879 Cma04g01528 Cma-Chr4:7735895 1.41E-129 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma01g00440 - - vvi:100241294 458.759