Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma01g00514 ATGGCTTCATTATCAATGGCTACCATTTTACCCCGTCTATCTCGTTTGGGGTTTGCGTCGAGATTTTCTTTAAACCCATTATTTATGTTCCCCAAAAGTGGAAGAATCGAGAGATTGAATCGATTGAAACCCTTTTCGATGGCTTCGGCTCCTAAAGAATCTCCGGCAAACAATCCGGGACTTCACGCAACCCCCGACGATGCCACTAAAGGTTACATGATGCAACAGACTATGTTTCGGATTAAGGATCCTAAAGCCAGTCTTGATTTCTATTCTCGAGTTCTGGGCATGTCGTTACTCAAGAGGCTGGATTTTCCTGAAATGAAGTTTAGCTTGTACTTCTTGGGTTATGAGGATGTTGCTTCTGCCCCAGACAACGCAGTTGATAGAACGGTCTGGACTTTTGGTCGGAAGGCTACAATTGAGTTAACACACAACTGGGGTACTGAAAGTGACCCTGAATTTAAAGGATATCATAATGGGAACTCGGATCCTCGTGGCTTTGGACACATTGGTATAACTGTTGATGACACGTATAAGGCGTGCGAGAGATTTGAACGCCTAGGAGTGGAATTTGTTAAAAAACCAGATGACGGCAAGATGAAAGGTATCGCATTTATAAAGGATCCTGATGGCTACTGGATTGAAATCTTCGACCTCAAACTTATCGGAAACGTGACTACTAATGCTGCTTGA 696 43.39 MASLSMATILPRLSRLGFASRFSLNPLFMFPKSGRIERLNRLKPFSMASAPKESPANNPGLHATPDDATKGYMMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDVASAPDNAVDRTVWTFGRKATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDTYKACERFERLGVEFVKKPDDGKMKGIAFIKDPDGYWIEIFDLKLIGNVTTNAA 231
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2644060 2647337 - CmaCh01G005140.1 Cma01g00514 286207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma01g00514 231 ProSitePatterns Glyoxalase I signature 1. 76 97 IPR018146 GO:0004462|GO:0046872
Cma01g00514 231 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 73 220 IPR037523 -
Cma01g00514 231 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 61 218 IPR029068 -
Cma01g00514 231 CDD GlxI_Zn 74 218 - -
Cma01g00514 231 PANTHER LACTOYLGLUTATHIONE LYASE GLYOXALASE I 36 227 - -
Cma01g00514 231 ProSitePatterns Glyoxalase I signature 2. 161 177 IPR018146 GO:0004462|GO:0046872
Cma01g00514 231 Gene3D - 48 223 IPR029068 -
Cma01g00514 231 PANTHER LACTOYLGLUTATHIONE LYASE 36 227 - -
Cma01g00514 231 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 76 217 IPR004360 -
Cma01g00514 231 TIGRFAM glyox_I: lactoylglutathione lyase 62 225 IPR004361 GO:0004462|GO:0046872
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g00514 Cma-Chr1:2644060 Cma11g00628 Cma-Chr11:3035055 1.01E-11 dispersed
Cma01g00514 Cma-Chr1:2644060 Cma05g01352 Cma-Chr5:10194752 9.89E-12 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma01g00514 K01759 - mnt:21403510 376.326