Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma01g00514 | ATGGCTTCATTATCAATGGCTACCATTTTACCCCGTCTATCTCGTTTGGGGTTTGCGTCGAGATTTTCTTTAAACCCATTATTTATGTTCCCCAAAAGTGGAAGAATCGAGAGATTGAATCGATTGAAACCCTTTTCGATGGCTTCGGCTCCTAAAGAATCTCCGGCAAACAATCCGGGACTTCACGCAACCCCCGACGATGCCACTAAAGGTTACATGATGCAACAGACTATGTTTCGGATTAAGGATCCTAAAGCCAGTCTTGATTTCTATTCTCGAGTTCTGGGCATGTCGTTACTCAAGAGGCTGGATTTTCCTGAAATGAAGTTTAGCTTGTACTTCTTGGGTTATGAGGATGTTGCTTCTGCCCCAGACAACGCAGTTGATAGAACGGTCTGGACTTTTGGTCGGAAGGCTACAATTGAGTTAACACACAACTGGGGTACTGAAAGTGACCCTGAATTTAAAGGATATCATAATGGGAACTCGGATCCTCGTGGCTTTGGACACATTGGTATAACTGTTGATGACACGTATAAGGCGTGCGAGAGATTTGAACGCCTAGGAGTGGAATTTGTTAAAAAACCAGATGACGGCAAGATGAAAGGTATCGCATTTATAAAGGATCCTGATGGCTACTGGATTGAAATCTTCGACCTCAAACTTATCGGAAACGTGACTACTAATGCTGCTTGA | 696 | 43.39 | MASLSMATILPRLSRLGFASRFSLNPLFMFPKSGRIERLNRLKPFSMASAPKESPANNPGLHATPDDATKGYMMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDVASAPDNAVDRTVWTFGRKATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDTYKACERFERLGVEFVKKPDDGKMKGIAFIKDPDGYWIEIFDLKLIGNVTTNAA | 231 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 2644060 | 2647337 | - | CmaCh01G005140.1 | Cma01g00514 | 286207 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma01g00514 | 231 | ProSitePatterns | Glyoxalase I signature 1. | 76 | 97 | IPR018146 | GO:0004462|GO:0046872 | |
Cma01g00514 | 231 | ProSiteProfiles | Vicinal oxygen chelate (VOC) domain profile. | 73 | 220 | IPR037523 | - | |
Cma01g00514 | 231 | SUPERFAMILY | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 61 | 218 | IPR029068 | - | |
Cma01g00514 | 231 | CDD | GlxI_Zn | 74 | 218 | - | - | |
Cma01g00514 | 231 | PANTHER | LACTOYLGLUTATHIONE LYASE GLYOXALASE I | 36 | 227 | - | - | |
Cma01g00514 | 231 | ProSitePatterns | Glyoxalase I signature 2. | 161 | 177 | IPR018146 | GO:0004462|GO:0046872 | |
Cma01g00514 | 231 | Gene3D | - | 48 | 223 | IPR029068 | - | |
Cma01g00514 | 231 | PANTHER | LACTOYLGLUTATHIONE LYASE | 36 | 227 | - | - | |
Cma01g00514 | 231 | Pfam | Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily | 76 | 217 | IPR004360 | - | |
Cma01g00514 | 231 | TIGRFAM | glyox_I: lactoylglutathione lyase | 62 | 225 | IPR004361 | GO:0004462|GO:0046872 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma01g00514 | Cma-Chr1:2644060 | Cma11g00628 | Cma-Chr11:3035055 | 1.01E-11 | dispersed | |
Cma01g00514 | Cma-Chr1:2644060 | Cma05g01352 | Cma-Chr5:10194752 | 9.89E-12 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma01g00514 | K01759 | - | mnt:21403510 | 376.326 |