Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma01g00521 ATGGCGAAGCGATTGTCAATTGGAAGCAGAGTGCGAAACAAGCTAGCAGATATTACGAATTCCAAGACAATGAGAGCTCATATGGAAGATGAAAGGTCTTCGGAAGCTTGGCGGTCAAATCAAGACGTTGTCGATCAGCTGGTGGACGAAAATATGGCTCTGATGAAACTTGTCATGGAGAAGAATGAAATTATTGATCTGAGTGAAGCCGAGCTAAACAAACTTCGGGAATGCATTCAGAAACTGCAGCTTCAGAATTGGCAGCTTGCTCAATCAAACAGTCATTTTTTAGCAGAAATCAATTTAGGGAGAGAGAGAATAAAATCACTGGGGCATGAGCTTGAATGCAAGGAGGCCTTGCTAAAAGCAACGCGTTTGAATACTGTGGGGAAAGCAGGAATGAATAATGGAAATTCTGAATGGCAGGAAGAAGAGAAGCCAACAGAGCAATTTCCACTTGCGGTTAAAACTGACACCAAAGCTTGCAGTGGAAACAGAAAGCCCTCCGGACGAGCTAGAAATCAATCTATGAGCCCTTCAGCTTCATACTCAAAGTGTGCGATGAAGAGAGATGATGAAAACAAAAGGCATTGTGTAAGAGCACAATCTGGTAGATTTAGATATCAAATGAGACACCCTGAAGATAACTCGTTTGAGATAGAAGAAGACATGAAATTTACTGCTACTGGAGAAGATGAAGAAGAAAGGAAGAACAACAATGTCAATTCACCATCATCATCTTCCGCTCTGCAAAGATCTTATATTGGAAGACCATTGCACAGAGCTGCTGAAAAGATTCAATCCTACAAAGAAGCTCGTCACAACGCTAAAATCAGACGACATGAATGA 849 41.58 MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVDENMALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEINLGRERIKSLGHELECKEALLKATRLNTVGKAGMNNGNSEWQEEEKPTEQFPLAVKTDTKACSGNRKPSGRARNQSMSPSASYSKCAMKRDDENKRHCVRAQSGRFRYQMRHPEDNSFEIEEDMKFTATGEDEEERKNNNVNSPSSSSALQRSYIGRPLHRAAEKIQSYKEARHNAKIRRHE 282
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2691129 2694120 + CmaCh01G005210.1 Cma01g00521 286214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma01g00521 282 Coils Coil 65 85 - -
Cma01g00521 282 PANTHER SHUGOSHIN 1 282 - -
Cma01g00521 282 MobiDBLite consensus disorder prediction 162 183 - -
Cma01g00521 282 Coils Coil 259 279 - -
Cma01g00521 282 MobiDBLite consensus disorder prediction 135 195 - -
Cma01g00521 282 PANTHER SHUGOSHIN 2 1 282 IPR044693 GO:0000775|GO:0034090|GO:0045144
Cma01g00521 282 MobiDBLite consensus disorder prediction 212 255 - -
Cma01g00521 282 MobiDBLite consensus disorder prediction 212 239 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma01g00521 Cma13g00231 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g00521 Cma-Chr1:2691129 Cma04g02548 Cma-Chr4:17454288 1.17E-07 dispersed
Cma01g00521 Cma-Chr1:2691129 Cma15g00499 Cma-Chr15:2242186 7.31E-08 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma01g00521 - - cmax:111493410 556.214