Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma01g00591 ATGGCGAAAATCCTAATTTCATCTTCCCCCTTCGTTGGTTCTTCTCTTCCATCTCTCCCTCGCCATGGCCGTCTCCACACTCTTCCTCACCGGAGACACGTCCCCACCAGAGTCAATTTCAGCTTCCATGAACTTCCTCCCATCCATACCTTCGATTCCACCTTCAATTTTGACGCAATTGTTAGCAGGACCGAAGGCCTGCTCTACACACTTGCTGATGCAGCGGTTGCAGTGGATTCGACTGTTTCTGGTGGTGCCGCATCGAGTTCCGCTGATACCGCGGTGCAGAAGAACGGTGGATGGTTTGGATTTATCTCCGATGCCATGGAAGTCGTTCTTAAAGTGTTGAAGGATGGACTTTCGGCTGTGCATGTGCCATATGCATATGGGTTTGCAATTATTTTACTTACTATTATCGTTAAGGTTGCAACTTTTCCTCTCACCAAGCAACAGGTTGAGTCAACATTGGCTATGCAAAATCTTCAACCAAAGATTAAAGCCATCCAACAAAGATACGCTGGCAATCAGGAAAGAATACAACTTGAGACATCGCGGCTTTATAGACAAGCTGGAGTTAATCCTTTAGCAGGCTGTTTCCCAACTTTGGCCACCATACCAGTCTGGATTGGACTATATCAAGCCCTTTCGAATGTGGCAAATGAGGGATTATTCACAGAAGGTTTCTTTTGGATTCCTTCTCTTGGTGGACCAACTACTATTGCTGCTCGACAAAGTGGAGCGGGAATCTCTTGGTTGTTTCCTTTTGTGGATGGCCATCCACCATTGGGCTGGTCTGACACTGCAGCTTACCTTGTATTACCTGTTCTCCTTGTCGTATCTCAGTATGTATCAATGGAAATCATGAAGCCTCCCCAGACTGATGATCCAACACAAAAGAACACACTCCTTATTTTCAAGTTTCTTCCCCTCATGATCGGTTACTTCTCCTTGTCTGTTCCATCAGGGTTATCAATTTACTGGTTCACCAACAATGTTCTCAGCACAGCTCAGCAAGTATGGTTACGCAAATTAGGAGGTGCAAAGCCTGTTGTAAATGAGGATGCTTCTGGAATCATAACAGCAGGACGTGCCAAACGAACGTCCGAATCAGAAAGAACGGGTGACAGATTTAAGCAGTTGAGGGAAGACGAGAAGAAGAATAAGTTAAGCAAGGCAGCTCGATCAGCAGAGATTCTGACTTTGGCTTCTGAGTCTGATAGTGAGGATGGGTACGATGAGGAGACATCAGAGAAGGGTGAAAACAGTCTGGAAGAGGCATATGCGTCAAGTGCAGACAAAGACATCCCAACCTATAATCGACAAAAGAGAAGCAAGCGATCAAAGAGGAAACGTGCAGTATGA 1362 45.74 MAKILISSSPFVGSSLPSLPRHGRLHTLPHRRHVPTRVNFSFHELPPIHTFDSTFNFDAIVSRTEGLLYTLADAAVAVDSTVSGGAASSSADTAVQKNGGWFGFISDAMEVVLKVLKDGLSAVHVPYAYGFAIILLTIIVKVATFPLTKQQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCFPTLATIPVWIGLYQALSNVANEGLFTEGFFWIPSLGGPTTIAARQSGAGISWLFPFVDGHPPLGWSDTAAYLVLPVLLVVSQYVSMEIMKPPQTDDPTQKNTLLIFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAKPVVNEDASGIITAGRAKRTSESERTGDRFKQLREDEKKNKLSKAARSAEILTLASESDSEDGYDEETSEKGENSLEEAYASSADKDIPTYNRQKRSKRSKRKRAV 453
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3103401 3109696 - CmaCh01G005910.1 Cma01g00591 286284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma01g00591 453 MobiDBLite consensus disorder prediction 399 453 - -
Cma01g00591 453 PANTHER OXA1 1 447 IPR001708 GO:0016021|GO:0032977
Cma01g00591 453 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 129 342 IPR028055 -
Cma01g00591 453 Pfam 60Kd inner membrane protein 129 343 IPR001708 GO:0016021|GO:0032977
Cma01g00591 453 PANTHER INNER MEMBRANE PROTEIN ALBINO3, CHLOROPLASTIC 1 447 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g00591 Cma-Chr1:3103401 Cma05g00057 Cma-Chr5:230281 1.18E-149 dispersed
Cma01g00591 Cma-Chr1:3103401 Cma12g00046 Cma-Chr12:173505 3.21E-136 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma01g00591 K03217 - csv:101217620 759.985