Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma01g00654 | ATGACTAACGACGTCGTTTTGCCGTTCCCCTTCCCCTTCCCCTTCCCCTTCCCCTTCCCCTTCCCCTCTTTAATTCTCCTCATTTTCGCCTATTTGATTTGGTTTCATTTCCTCGCCCGTACGCTAACCGGTCCAAGAGTCTGGCCGGTCATAGGCAGCCTACCGGCTCTCATCTCGAATCGGCGGAGGTTCCATGACTGGATGGCTGGGAACCTCCGCTCCACAGGCAGCGCCGCCACATACCAAACTTGTACGGTGGCACTTCCATTCTTCGCTAGAAAACAAGGCTTCTACACGGTCACGTGCCACCCGAGAAACATCGAGCACGTGCTCCGAACCCGGTTCGAAAATTACCCGAAAGGACCGGACTGGCAAGCGGCTTTTCACGATCTTTTGGGTCAAGGGATTTTCAACAGCGACGGCGAGATTTGGCTGGTTCAGCGGAAGACGGCGGCGCTGGAGTTCACGACGAGGACGCTACGGCAGGCGATGGACCGGTGGGTGAATCGCACGATAAGGACGCGACTTTGGTGCATATTGGATAAGGCGGCGGAGTATAAAACGGCGGTTGATTTGCAGGATTTGTTGCTCCGATTGACTTTTGATAACATTTGTGGGCTCACTTTTGGGAAAGATCCTCAAACTTTGTCGCCGGAATTGCCTGCAACTCCCTTCGCTTTGGCGTTTGATTCCGCCACTGAAGCCACTCTTCACCGCCTTCTTTACCCTAGCATTTTATGGAGGTTAAAGAAGCTTCTCTGCATCGGAATGGAAAGAAGGTTAAAGGAGAGTTTAAAAGTAATAGAGGAATACATAAACGACGCCGTTGCAGCCCGTAAAGAATCCCCCTCAGACGACTTATTATCCCGCTTCATGAAGAAGAAGCACGACGGGGACGGCGACGGCAACCGCTTCTCCGCCGCAGTGCTCCACCGCATCGCCTTAAACTTCGTCCTCGCCGGCCGGGACACATCCTCCGTGGCACTCACGTGGTTCTTTTGGCTCGTAATGAACCACCCGCACGTGGAGGCTACAATCCTCGCCGAAATCTCAACGGTTCTCCGTGAGACACGCGGCGACGATCCACGCCGGTGGATCGAAGAGCCGTTGATGTTCGACGAGGCCGATAAATTGGTGTATTTAAAAGCCGCGCTGGCCGAAACGCTGCGTTTATACCCGTCCGTACCACTGGATTTCAAATACGTCGTGGCTGATGACGTGTTGCCAGATGGCAGTTTTGTGCCAGCCGGTTCGACCGTGACGTATTCGATTTATTCGGTCGGGAGGATGAAGAGCATTTGGGGGGAGGATTGTGGGGAATTTAAACCAGACCGGTGGCTGTCGCCTGACGGGGACCGGTTCGAGGGGCCGAAAGATGGGTATAAATTCGTGGCGTTTAATGCTGGACCGAGAACTTGTTTGGGAAAGGATTTGGCTTATTTGCAAATGAAGTCCATCGCCTCCGCCGTGCTCCTCCGGTATCAGCTGGCGCCGGTTCCCGGTCACCGGGTGGAACAAAAAATGTCTCTTACTCTTTTTACGAAGAATGGGCTTCGGGTTTATTTGCATCCTCGCCGGCTCGGGTAG | 1587 | 53.81 | MTNDVVLPFPFPFPFPFPFPFPSLILLIFAYLIWFHFLARTLTGPRVWPVIGSLPALISNRRRFHDWMAGNLRSTGSAATYQTCTVALPFFARKQGFYTVTCHPRNIEHVLRTRFENYPKGPDWQAAFHDLLGQGIFNSDGEIWLVQRKTAALEFTTRTLRQAMDRWVNRTIRTRLWCILDKAAEYKTAVDLQDLLLRLTFDNICGLTFGKDPQTLSPELPATPFALAFDSATEATLHRLLYPSILWRLKKLLCIGMERRLKESLKVIEEYINDAVAARKESPSDDLLSRFMKKKHDGDGDGNRFSAAVLHRIALNFVLAGRDTSSVALTWFFWLVMNHPHVEATILAEISTVLRETRGDDPRRWIEEPLMFDEADKLVYLKAALAETLRLYPSVPLDFKYVVADDVLPDGSFVPAGSTVTYSIYSVGRMKSIWGEDCGEFKPDRWLSPDGDRFEGPKDGYKFVAFNAGPRTCLGKDLAYLQMKSIASAVLLRYQLAPVPGHRVEQKMSLTLFTKNGLRVYLHPRRLG | 528 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 3418591 | 3421258 | + | CmaCh01G006540.1 | Cma01g00654 | 286347 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma01g00654 | 528 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 466 | 475 | IPR017972 | GO:0005506|GO:0016705 | |
Cma01g00654 | 528 | PANTHER | CYTOCHROME P450 | 16 | 526 | - | - | |
Cma01g00654 | 528 | SUPERFAMILY | Cytochrome P450 | 34 | 525 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g00654 | 528 | Pfam | Cytochrome P450 | 99 | 513 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g00654 | 528 | Gene3D | Cytochrome P450 | 38 | 527 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g00654 | 528 | PANTHER | CYTOCHROME P450 FAMILY-DEPENDENT FATTY ACID HYDROXYLASE | 16 | 526 | - | - | |
Cma01g00654 | 528 | PRINTS | P450 superfamily signature | 320 | 337 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g00654 | 528 | PRINTS | P450 superfamily signature | 383 | 394 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g00654 | 528 | PRINTS | P450 superfamily signature | 464 | 473 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g00654 | 528 | PRINTS | P450 superfamily signature | 473 | 484 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g00654 | 528 | PRINTS | E-class P450 group I signature | 309 | 326 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g00654 | 528 | PRINTS | E-class P450 group I signature | 329 | 355 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g00654 | 528 | PRINTS | E-class P450 group I signature | 382 | 400 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g00654 | 528 | PRINTS | E-class P450 group I signature | 463 | 473 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g00654 | 528 | PRINTS | E-class P450 group I signature | 473 | 496 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma01g00654 | Cma13g00080 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma01g00654 | Cma-Chr1:3418591 | Cma17g00985 | Cma-Chr17:7250967 | 1.57E-141 | dispersed | |
Cma17g00437 | Cma-Chr17:2600115 | Cma01g00654 | Cma-Chr1:3418591 | 0 | transposed | |
Cma01g00654 | Cma-Chr1:3418591 | Cma13g00080 | Cma-Chr13:600631 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma01g00654 | K15401 | - | csv:101214516 | 929.472 |