Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma01g00681 ATGGGTACTCATCGTTTCAAATTGTCCTTTTTCGTATCGCTTTCTTCTGATCAGAATCAGAGAATTTCAAAGCTTATCGGTTCGTCTTCGCTGTTTCAGCAATCATTCAAAGGGATTTCTCCACTGTTCTTCCATAAGAAATTAGTGCTTTGTCCCTTACTCACCATTTTTGCCTCTCTCTTTTCCTCTGAAGCCATGAACAACAACCCATCACAGGAAAATGTTGAAACTGAAGGCATTTCTTCAAAGAATGTGAAGAATGAGTCCTACAGAAGTGTGCTTATGCTGGCTTACCAAAGTTTAGGAGTCGTTTACGGCGACCTCAGCACGTCACCTCTATATGTTTATAAAACCACATTCTCTGGGAAATTGAGTTTACATGAGAATGATGAAGAGATTTATGGGGTTTTATCCTTCATCTTCTGGACGTTTACACTCATTGCTCTCTTCAAATACGTTTTCATTGTCATGTCAGCCGACGATAACGGTGAAGGGGGTACCTTTGCTCTGTACTCTCTTCTCTGCAGGCATGCTAGATTATGCATTCTACCAAATCAAGAGCCTGCTGATGAAAAGTTATCTGCATATGAAATGAAGGAAAGCTTGGAGACAAGACCAAGTGCTGCTCTAAAATCTTTTTTTCAGCTGCACCCGTCTTTTCGAAAAGGTTTTTTGGTGTTCGTGCTCTTCGGAACCTCCATGGCTATTGGTGATGGAGTGCTCACTCCTGCAATATCAGTTCTTTCAGCAGTCTCTGGAGTCAAACATAAGATCACTGGACTCCATGAGAATTATGTTGTTTTAATCTCGTGCGTCGTCTTAGTTGGATTGTTCTCCCTTCAGCATTGTGGGACACACAAAGTTTCTTTCATGTTTGCTCCAATCATCACGACATGGCTCGTCTCTATTAGTGTTATCGGAATGTATAATATTATCAAGTGGAATCCGCGTATATACCATGCTCTCTCTCCTGTTTATATGCTGAAGTTCCTTCATAGCACGGGCGTTGAAGGTTGGATTTCATTAGGCGGAGTCGTTCTCTCGATAACAGGTGTGGAGGCAATGTTTGCTGATTTAGGCCACTTCTCTACGCTTTCGATCAAGATTGCCTTCACATTTATTGTATATCCCTCATTGATTCTTGCTTATCTGGGTGAGGCTGCATTCCTTTCTAAGCATCATGAAGATATTCAGAGAAGCTTCTACAAAGCGATACCTGAAGCGGTGTTTTGGCCTGTGTTCGTTGTGGCCACTTTTGCTTCTGTTGTAGGAAGTCAGGCCGTGATTTCGGCTACGTTCTCGCTCGTAAACCAGTGCTGTGCTCTGAATTGCTTCCCCCATGTGAAAACTATGCACACTTCAAACCAGATATGTGGGCAAATTTATATTCCAGAAGTTAATTGGATGCTAATGTGCCTTTGTTTAGCTGTGACAATTGGCTTGAGAGATACAAACATGTTAGGCCATGCATATGGGCTGGCAGTCACCATTGTTATGTTTGTCTCGACTTGCTTGATGGCACTCGTGATACTAATCGTTTGGAAGCAGAGGTTGATCGGCGCCATAGCGTTTTTCATGTTTTTTGGGTCCATTGAACTACTTTACATCTCAGCATCAATCAGCAAAGTTCACGAAGGTGGGTGGATACCCGTCGTGCTTTCTATACTCTTTATGTGTTCGATGTATACATGGTACTACGGGACAATGAAGAAACACGAATACGACGATGAGAACAAAGTGTCGATGAATCGGATACTTTCTTCAGGGCCTAGCCTTGGCATAGTGCGTGTGCCCGGAATAGGCCTCATATACACTAATCTGATCTCGGGTGTTTCTGCTGTTTTTGGTCACTTTGTAACCACGTTGCCTGCATTTCATCAAGTGCTCGTGTTTGTATGTATAAAGTATGTTCAAGTTCCTCATATCGACGAAGAACATCGGCTGCTCATCACAAGGGTTGGACCGAAAGAATGCAACATGTTTCGGTGCATCGTGAGATATGGCTATAGGGATTTGCTACAAGAAAACTACGATTTCGAGAACAGGTTGGTGTTTTCTCTAATGCAGTATGTAGAAACAGAAGATCAGTTTTGGAAACCAATGACACCTTGTGAATATGAACCATTGGAGCAGTCTTCCTACAAATATAAAGCGACGAATACCACGGTTGACGATCGGGAGAAGTCGACACATAGCGAGGAGGCGATGCTGATAATGAGAGCGAAAGAGTCGGGAGTCACGTACATTTTCGGGCATTGCTCGGTCAAGGCCAAGAAATCGTCCTCCATTCTTAAGAAGTTGGGTATTGATATTGTGTATGCTTTTTTGAACCAGAATTGTAGAGAGCCTGAGGCTTTACTGAATGTGCCTCACACTTCTCTCTTGGAGGTTGGTATGGTTTATTATGTATAG 2412 42.74 MGTHRFKLSFFVSLSSDQNQRISKLIGSSSLFQQSFKGISPLFFHKKLVLCPLLTIFASLFSSEAMNNNPSQENVETEGISSKNVKNESYRSVLMLAYQSLGVVYGDLSTSPLYVYKTTFSGKLSLHENDEEIYGVLSFIFWTFTLIALFKYVFIVMSADDNGEGGTFALYSLLCRHARLCILPNQEPADEKLSAYEMKESLETRPSAALKSFFQLHPSFRKGFLVFVLFGTSMAIGDGVLTPAISVLSAVSGVKHKITGLHENYVVLISCVVLVGLFSLQHCGTHKVSFMFAPIITTWLVSISVIGMYNIIKWNPRIYHALSPVYMLKFLHSTGVEGWISLGGVVLSITGVEAMFADLGHFSTLSIKIAFTFIVYPSLILAYLGEAAFLSKHHEDIQRSFYKAIPEAVFWPVFVVATFASVVGSQAVISATFSLVNQCCALNCFPHVKTMHTSNQICGQIYIPEVNWMLMCLCLAVTIGLRDTNMLGHAYGLAVTIVMFVSTCLMALVILIVWKQRLIGAIAFFMFFGSIELLYISASISKVHEGGWIPVVLSILFMCSMYTWYYGTMKKHEYDDENKVSMNRILSSGPSLGIVRVPGIGLIYTNLISGVSAVFGHFVTTLPAFHQVLVFVCIKYVQVPHIDEEHRLLITRVGPKECNMFRCIVRYGYRDLLQENYDFENRLVFSLMQYVETEDQFWKPMTPCEYEPLEQSSYKYKATNTTVDDREKSTHSEEAMLIMRAKESGVTYIFGHCSVKAKKSSSILKKLGIDIVYAFLNQNCREPEALLNVPHTSLLEVGMVYYV 803
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3563308 3568920 + CmaCh01G006810.1 Cma01g00681 286374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma01g00681 803 PANTHER POTASSIUM TRANSPORTER 83 803 - -
Cma01g00681 803 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 83 803 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cma01g00681 803 TIGRFAM kup: potassium uptake protein 96 803 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cma01g00681 803 Pfam K+ potassium transporter 98 671 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g00681 Cma-Chr1:3563308 Cma14g00777 Cma-Chr14:3875304 0 dispersed
Cma01g00681 Cma-Chr1:3563308 Cma11g01561 Cma-Chr11:10170172 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma01g00681 K03549 - csv:101222845 1315.06