Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma01g00707 ATGGTTGACAACGGCGAGGAAAAATTGCTGGCTATGGCTCGCCACATAGCCAAGACTATGGGCCGCAACGAGTCCATGGCCGATGATATTCTCCAGATTTTTTCCAATTTCGATGCTAGGTTTTCCCTTGACAAGCTCTCTGATAAATCCGATGAGGTTGATCCCAGAAGCTCTGTCGCTTTGCAGCGCTCTCTCAAGTCTTTGGACCGCCGGATCTCCCAATACTTGGCGGCTGACCAGCCGATTTGGGCGGATTCCGCCGATTCCTCTGCTTTTCTTGACGCTATTGATGAGTTGATTGATACCATTAGGGACTGGACGCCGATGGCTAGGGATAAGTCTGTTGGTACCTACCTTGCTCACGCCGACGATCTGATGCAGCAGGCGATGTTTCGTGTAAGTGAAGAGTTCCGGTCGTTGATGGAGCGTGGAGGTGAGTCTTTTGAACTAACTCGCCATTTCAGGAACCGTGAGTCAACGGGCGAGTTTTTCTTCGATTCTGAGGAAGATGAGGAAGGTGCGGAAGGAATTCTTGGTGACGGCCTCCAGATCCCGGTGGCGCAGCCGTTGACAGACTACAACGTCGTAATCGATGCGCTTCCGTCGGGGACTATCAGCGATCTCCATGAGATAGCGAAGCGTATGGTGGCGGCTGGGTACGAGAAGGAGTGTTCGCACGCTTACAGTAGCTGCAGGAGGGAGTTCTTAGAGGAGAGTCTTTCTAGGTTGGGGTTACAGAAGCTTAGCATCGATGAAGTTCAAAAGATGCAATGGCAAGACATGGAAGAGGAGATTGAGCGCTGGATGAAAGCGATTACCGTCTCCCTTCGAATCCTCTTCCCAAGCGAACGACGGCTCTGCGAACGAGTCTTCGTCGGCCTCTCCTCCGCTGCTGATCTCTCTTTCATGGAGGTCTGCCGAGGATCAACAATTCAGCTACTGAATTTTGCAGATGCGGTCGCGATCGGCTCGCGAGCCCCGGAACGGCTGTTCAAAATCCTCGACATGTTCGAGACCTTGAGAGACTTGATGCTGGATTTCGATTCAGTATTTTCGGATCAGTACTGCTTGTTACTTAGAAACGAAGCAATCGCAATCTGGAAAAGGTTAGGCGGAACAATCAAGGGGATCTTCATGGAGCTCGAGAATTTGATCCGTCGTGATCCGGCTAGAACTCCAGTTCCGGGGGGCGGCCTTCATCCAATTACTCGGTATGTGATGAATTACCTTAAAGCAGCCTGTAAATCACGGCAGACTTTGGAGCAAATTTTCGAAGAAGCCGCTCTTCCTTCGAAGGATTACACCAAACTCGATGACAGAGCAACAGCATCGTCTTCATTATCAGTTCAAATGGACTGGATTATGGAGCTTTTAGAGAGCAATTTAGAGGCAAAGTCGAAGATATACAATGATCTTTCCTTAAGCTCTGTGTTTCTGATGAACAATGGCCGATACATTGTTCAGAAAGTGAAAGACAGCGAATTAGGATCAGTTTTAGGGGACGATTGGATTCGAAAGCACTCGGTTAAAAGCCGGCAATACCTCGGAAATTTCCTGAAAAGTTCATGGAGCAAGGTGGTCGGAGTATTGAAAATTGACAGTGGCTCCATAGCTCCGGCTGTAATGAAAGAGAAGCTGAAATCATTCAACATACAGTTCGAAGAAATCTGCCAAACCCAATCTACATGGGTGATATTCGAGAATCAGCTTAGAGAAGAAGCAAAAATCTCAGTTACCAAAATCCTAATGCCTGCATATCAAAACTTCATCAAAAGGTACCAGAGTTTGTCGGAGTTGTCGAAGCGTACAGACCGGCATTTGGTGTACACGGCGGAGGATGTGGAGGCTCAGATCACCAAGCTGTTCCAAGGAGGCGGCGGAAGGAGGTAA 1890 48.73 MVDNGEEKLLAMARHIAKTMGRNESMADDILQIFSNFDARFSLDKLSDKSDEVDPRSSVALQRSLKSLDRRISQYLAADQPIWADSADSSAFLDAIDELIDTIRDWTPMARDKSVGTYLAHADDLMQQAMFRVSEEFRSLMERGGESFELTRHFRNRESTGEFFFDSEEDEEGAEGILGDGLQIPVAQPLTDYNVVIDALPSGTISDLHEIAKRMVAAGYEKECSHAYSSCRREFLEESLSRLGLQKLSIDEVQKMQWQDMEEEIERWMKAITVSLRILFPSERRLCERVFVGLSSAADLSFMEVCRGSTIQLLNFADAVAIGSRAPERLFKILDMFETLRDLMLDFDSVFSDQYCLLLRNEAIAIWKRLGGTIKGIFMELENLIRRDPARTPVPGGGLHPITRYVMNYLKAACKSRQTLEQIFEEAALPSKDYTKLDDRATASSSLSVQMDWIMELLESNLEAKSKIYNDLSLSSVFLMNNGRYIVQKVKDSELGSVLGDDWIRKHSVKSRQYLGNFLKSSWSKVVGVLKIDSGSIAPAVMKEKLKSFNIQFEEICQTQSTWVIFENQLREEAKISVTKILMPAYQNFIKRYQSLSELSKRTDRHLVYTAEDVEAQITKLFQGGGGRR 629
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3710679 3713188 + CmaCh01G007070.1 Cma01g00707 286400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma01g00707 629 Pfam Exo70 exocyst complex subunit 266 619 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cma01g00707 629 PANTHER EXOCYST COMPLEX PROTEIN EXO70 29 623 IPR004140 GO:0000145|GO:0006887
Cma01g00707 629 SUPERFAMILY Cullin repeat-like 83 622 IPR016159 -
Cma01g00707 629 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 29 623 - -
Cma01g00707 629 Gene3D Exocyst complex component Exo70 80 628 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma01g00707 Cma13g00032 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g00707 Cma-Chr1:3710679 Cma13g00803 Cma-Chr13:6823642 7.27E-123 dispersed
Cma01g00707 Cma-Chr1:3710679 Cma13g00032 Cma-Chr13:383306 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma01g00707 K07195 - csv:101204511 1072.38