Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma01g00721 ATGAATATTATAATATTCGCCGCCTTGCTTTTCACGGCGGTTTCCGGCACGGCAGCCGCCGGCAGCTCCTCCTCTCATCTCTCCAAAAAGTTCTACCACACCAGCTGTCCTCAGCTCTTCTCCATCGTTAAATCCATCCTTAAACATCAAATCTCAAAGGAACGACGCATCGGAGCTTCTCTCCTTCGTCTCCACTTTCACGACTGTTTCGTCAACGGATGCGATGCATCAGTGTTGCTAGACGATCATGGGTCATTCGTAGGCGAACAAAATGCAAATCCCAACAAAAACTCGCTTAGAAGTTTCGATGTGATCGATAAAATCAAGTCTAGAGTTGAGAAGTCGTGTCCTGGCGTAGTGTCGTGTGCTGATATCTTGACTATTGCTGCTCGGGATTCCGTTGCATTGCTTGGAGGGCCGTTTTGGAATGTTAAACTTGGACGAAGAGACTCAAAAACAGCAAGCTTTTCTGATGCCAATAGCGGATTGCTTCCTTCACCAAACTCCAATCTCTCCGTTCTAATCTCTACATTTAAAAAACAAGGCCTTTCTACTACCGACATGGTTGCCCTCTCAGGAGGTCACACCATTGGACTAGCAAGATGTAGTCAATTCAAAACACGCATATACAAGAAGAGCCATATCAACGCTGGATTTGCAAAGAAGAGACAGCGACAATGTCCCAAAAAACAGCGCATAGGCATCGACAATCTTGCTCCATTCGACATCCAAACGCCCATGGTTTTCGACAACAAATACTTCGACAACCTTATTAAGAAGAAAGGTCTGCTGCATTCTGACCAGGTGCTGTTTTCCGGCGGCTCCACTGACTCTCTAGTTAAAAAGTACAGTCGAGACAATGGGGCCTTCAATCGAGACTTCGTTCGAGCCATGATTAAGATGTCTCACATCCAACCCCTCACTGGGTCCGATGGCGAGATTAGAAAAGTCTGCGGAAGATCCGATTGA 969 46.34 MNIIIFAALLFTAVSGTAAAGSSSSHLSKKFYHTSCPQLFSIVKSILKHQISKERRIGASLLRLHFHDCFVNGCDASVLLDDHGSFVGEQNANPNKNSLRSFDVIDKIKSRVEKSCPGVVSCADILTIAARDSVALLGGPFWNVKLGRRDSKTASFSDANSGLLPSPNSNLSVLISTFKKQGLSTTDMVALSGGHTIGLARCSQFKTRIYKKSHINAGFAKKRQRQCPKKQRIGIDNLAPFDIQTPMVFDNKYFDNLIKKKGLLHSDQVLFSGGSTDSLVKKYSRDNGAFNRDFVRAMIKMSHIQPLTGSDGEIRKVCGRSD 322
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3796278 3797479 + CmaCh01G007210.1 Cma01g00721 286414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma01g00721 322 Pfam Peroxidase 44 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma01g00721 322 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma01g00721 322 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma01g00721 322 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma01g00721 322 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma01g00721 322 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma01g00721 322 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma01g00721 322 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma01g00721 322 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma01g00721 322 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma01g00721 322 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Cma01g00721 322 SUPERFAMILY Heme-dependent peroxidases 27 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cma01g00721 322 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma01g00721 322 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma01g00721 322 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma01g00721 322 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma01g00721 322 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma01g00721 322 CDD secretory_peroxidase 26 320 IPR033905 GO:0004601|GO:0042744
Cma01g00721 322 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Cma01g00721 322 Gene3D - 30 318 - -
Cma01g00721 322 Gene3D Peroxidase, domain 2 165 301 - -
Cma01g00721 322 PANTHER PEROXIDASE 21 319 - -
Cma01g00721 322 ProSiteProfiles Plant heme peroxidase family profile. 26 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma01g00721 322 PANTHER PEROXIDASE 72-RELATED 21 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma01g00721 Cma20g00313 CCT
Cma01g00721 Cma02g00707 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g00721 Cma-Chr1:3796278 Cma20g00313 Cma-Chr20:1550512 3.77E-145 dispersed
Cma01g00720 Cma-Chr1:3790072 Cma01g00721 Cma-Chr1:3796278 5.44E-117 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma01g00721 K00430 - fve:101301085 402.134