Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma01g00735 ATGGCTAACTCAGTGTCTCCGAGTGACAGGCAATTGAAGAGGTTGGAGTCTGGGAAGTCTCATTCTTGGTGGTGGGATAGTCACCTCAGCCCCAGAAACTCTAGATGGCTCACGGAGAATCTCGAGGTGGCTTCCAATCCCCAAATTGCTTTATGCTGCCTTGCACAGATAGGGAACGTTTGTTTTAGGATAGTACTTTCCTCTTTTGTGTTCCTTTTCTCTGGGAGTGCTAGAAAAGATGAAGGTATTATTAGGTCTCTAAGTTCATATTCTAAAAGGGGTGGGGTTAAATTTGGGAATATAGGCAGCAGTTGCAAAATTTTAGCTTCTTCCTTCTTTCTGCATGAATCTTATGGTACCTGGGTTCAACTGCCCAAACATTTGCATGGAATTAGTTCCTGTATGCTCCAATTTTACTACTGCAATTCAACAATAGAGATGGACCGCAGCATCAAACGTATGTTGAAGCTAATAGAAGAGGATGCAGATTCATTTGCCAAGAAGGCTGAGATGTATTATCAGAAGAGGCCAGTGTTGATCTCTCATGTTGAGGAGTTCTATCGCATGTATCGTTCCCTTGCTGAGCGTTACGATCATGTGACAGGAGAGCTGCGAAAAAATATTCCTTCAGATCTACAATCCCAGGGCTCTGGTATTTGTGACCTGCCCTCTGAGCCATCCTCTACATGGCCCTCTCCTGATCAAAGGCTTGGACGTCGTAGATCTGGGCCACGAGCTGCTGGTTTTGATTTCTTCCTTGGATCTGGTGGGAGCAATGATATTTGCCAAAAGGAAGGAGATGAATCATCATCCTTAACAGAATCTGAACCTGATTCCGATGACTCCTCGGTGTACAATTATGCAGGTGGTGATCAAGGACTGAACAGGAAGATGATTGAATTGGAGATTGAGCTTCGTGAGGCCAGAGAAAAGATCCGCATGAAGGAGGAAAATGCAGAAAGTTCATTTCCATTCAAGGGGTTAACAGATGAAAATTCTGATGATGCTTTTGCTAGAAATAGAGAGGAAGAATTAAGGAATGCAAATGAGAAGCTGCGAATTTCAGACATCCAGATCACGAGGTTGAAAAATAAGCTCCTGAAATACGAGCAATCAGAATTGACCAAAGATTTGAAGGCTGAGTCTGTATCTGCTACAATGGCAGATACCAAGAGGCATGAGGATGAGGTTCCCTTGGTCATTAATCTGGAATCAGAGGTTGAAGAACATCATACAGGTTTGGAAGATGACCAAGTGATTAACGTTCAGGGATTGGTGGCAGAGCTAAAAATTACAAAGGAAAGACTTGAGAACTCGCAGAAAGAACTTTGTAAATTGAAACTTCAACATGAGAATAATAGGTCACCCGAGAAAATCTGCCATTTGCAGGATGAGCTTGAAGCTGCTCGAAAAGATACTGCCACGTGGAAGGCCAAGCTGAGTGCAGAGAAAAGAGAGGTCTCTAAACTCCAAGAAAGAATTGTGAGGTTGAAAGCTAGTTTATTAGATCGAGATCATGAGATCAGAGATTTAAATTTAGCAGTATCTGATGCTGAGCAGAAAATTTTTCCTGAGAAAACACAGATTAAGGCTGAAATATCTCGGCTACTTGAGGAACGAGCTCTGTTGATGGAACAACTAAGAAAATGGGAACATCAAACTCGTCTTTTGGAGGATGAGATCAGAAAAGTCAAGAGGGAAAAGGTGGTTTTGGAGGAGAGACTTAATCGTGAGATTCAGTTGTTGGAAACGACCATTGTTAACAAAGTAGAATGCATTGAGAATCTTAAAAGTGGCCTTGATGGCTTCCAATCTGAAAGAGATCAGCTCCATTCCGAAGTTATTACTTTGAAAGAGAATTTGAGCTCTAAAGACAAGCAGGATTATGAATACGGATCTGGATTTCATTCGGATCTGAAGATGAAGGCTTTATTTGAGCGCCAGAGCAAGAGCGTATACATCATCTGCTTCAATTTTAAAGAGGAGTTCAATACCATGGATCTTCTCCTTTTGGAGAAGGCTCTGCTGGGGCTGTTTGTGGCCATGGTTGTTGCTATTACCATATCCAAGCTCAGGGGTAAACGTTTTAAGCTCCCACCAGGTCCCTTCCCCATACCCATATTTGGGAATTGGCTGCAGGTGGGTGATGACTTGAACCACCGCAACCTGACGGAGATGGCCAAGAAATTCGGAGACATACTGTTGCTCAGAATGGGACAGCGGAACCTGGTGGTTGTTTCTTCACCAGAGCTGGCTAAGGAAGTGCTGCATACCCAGGGAGTTGAATTCGGGTCCAGGACTAGGAACGTGGTGTTTGATATATTCACCGACAAGGGTCAGGACATGGTGTTCACAGTTTACGGCGAGCACTGGAGGAAAATGAGACGAATCATGACTGTCCCCTTTTTCACAAACAAGGTGGTGCAGCAGAACAGGCTTGGTTGGGAGGAGGAGGCTTCCAGAGTTGTGGAGGATCTCAAGAACGATCCAAAAGCTTCCACCAGTGGGGTGGTTCTGAGGAGGCGCCTGCAGCTTCTTATGTATAACAATATGTATAGGATTATGTTTGACAGGAGATTCGACAGCATGGAGGACCCTCTCTTCAACAAACTCAAGCTTATAAACGCCGAGAGGAGTCGGCTATCTCAGAGCTTTGAATACAACTACGGCGATTTCATCCCCATACTGAGGCCTTTCTTGAGAGGGTATTTGAATGTGTGTAAGGACGTCAAGGAGAGGAGGCTCAAGCTCTTCAAGGACAATTTTGTCGATGAGAGGAGGAGACTTACTAGCACGATTAGCAACAAGGAGGATAGTGTCAAATGTGCCATTGATCATATCGTGGAGGCTCAAGAGAATGGTGAAATCACCGAAGCTAATGTTCTCTTCATTGTTGAGAACATCAATGTTGCCGCAATTGAAACAACATTGTGGTCGATGGAGTGGGCAATTGCTGAGCTCGTGAACCACCCCAACATCCAGAAAAAGCTGAGGGATGAGCTCGATTCAGTGCTTGGACATGGCGTTCAAATTACGGAGCCCGACATTCGCAATCTGCCTTACTTGCAGGCTGTTATCAAAGAGACCATGCGGCTAAGAATGGCCATTCCTCTCCTAGTGCCTCACATGAATCTCCTAGACGCCAAGTTGGCTGGTTATGACATCCCTGCAGAGAGCAAGATTCTTGTGAACGCATGGTGGCTGGCCAACAACCCTGACCACTGGAACAAACCCCATGAATTCCGACCTGAGAGGTTCTTAGAGGAGGAAGCCGACGTGGAGCCTAGCGGGAACGACTTCAGGTACCTTCCCTTCGGTGCCGGGAGGAGGAGTTGCCCCGGCATCGTCCTTGCCTTGCCAATTGTTGCCATTACTTTGGGTCGTCTCATTCAGAACTTTGAGCTGCTGCCTCCTCCTGGACAGTCCAAGATTGATACCACTGAAAAGCCTGGACAGTTCAGCTTGCAAATATTGAACCACTCCACTATTGTCGCAAAGCCAAGGTCTTTGTGA 3513 45.29 MANSVSPSDRQLKRLESGKSHSWWWDSHLSPRNSRWLTENLEVASNPQIALCCLAQIGNVCFRIVLSSFVFLFSGSARKDEGIIRSLSSYSKRGGVKFGNIGSSCKILASSFFLHESYGTWVQLPKHLHGISSCMLQFYYCNSTIEMDRSIKRMLKLIEEDADSFAKKAEMYYQKRPVLISHVEEFYRMYRSLAERYDHVTGELRKNIPSDLQSQGSGICDLPSEPSSTWPSPDQRLGRRRSGPRAAGFDFFLGSGGSNDICQKEGDESSSLTESEPDSDDSSVYNYAGGDQGLNRKMIELEIELREAREKIRMKEENAESSFPFKGLTDENSDDAFARNREEELRNANEKLRISDIQITRLKNKLLKYEQSELTKDLKAESVSATMADTKRHEDEVPLVINLESEVEEHHTGLEDDQVINVQGLVAELKITKERLENSQKELCKLKLQHENNRSPEKICHLQDELEAARKDTATWKAKLSAEKREVSKLQERIVRLKASLLDRDHEIRDLNLAVSDAEQKIFPEKTQIKAEISRLLEERALLMEQLRKWEHQTRLLEDEIRKVKREKVVLEERLNREIQLLETTIVNKVECIENLKSGLDGFQSERDQLHSEVITLKENLSSKDKQDYEYGSGFHSDLKMKALFERQSKSVYIICFNFKEEFNTMDLLLLEKALLGLFVAMVVAITISKLRGKRFKLPPGPFPIPIFGNWLQVGDDLNHRNLTEMAKKFGDILLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTDKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQNRLGWEEEASRVVEDLKNDPKASTSGVVLRRRLQLLMYNNMYRIMFDRRFDSMEDPLFNKLKLINAERSRLSQSFEYNYGDFIPILRPFLRGYLNVCKDVKERRLKLFKDNFVDERRRLTSTISNKEDSVKCAIDHIVEAQENGEITEANVLFIVENINVAAIETTLWSMEWAIAELVNHPNIQKKLRDELDSVLGHGVQITEPDIRNLPYLQAVIKETMRLRMAIPLLVPHMNLLDAKLAGYDIPAESKILVNAWWLANNPDHWNKPHEFRPERFLEEEADVEPSGNDFRYLPFGAGRRSCPGIVLALPIVAITLGRLIQNFELLPPPGQSKIDTTEKPGQFSLQILNHSTIVAKPRSL 1170
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3865362 3871968 - CmaCh01G007350.1 Cma01g00735 286428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma01g00735 1170 Coils Coil 480 500 - -
Cma01g00735 1170 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 1105 1114 IPR017972 GO:0005506|GO:0016705
Cma01g00735 1170 PRINTS E-class P450 group I signature 727 746 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g00735 1170 PRINTS E-class P450 group I signature 846 864 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g00735 1170 PRINTS E-class P450 group I signature 980 1006 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g00735 1170 PRINTS E-class P450 group I signature 1023 1041 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g00735 1170 PRINTS E-class P450 group I signature 1112 1135 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g00735 1170 PRINTS E-class P450 group I signature 960 977 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g00735 1170 PRINTS E-class P450 group I signature 1064 1088 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g00735 1170 PRINTS E-class P450 group I signature 751 772 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g00735 1170 PRINTS E-class P450 group I signature 1102 1112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g00735 1170 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 118 204 IPR011684 GO:0003779
Cma01g00735 1170 Coils Coil 526 581 - -
Cma01g00735 1170 MobiDBLite consensus disorder prediction 208 235 - -
Cma01g00735 1170 PRINTS P450 superfamily signature 1024 1035 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g00735 1170 PRINTS P450 superfamily signature 971 988 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g00735 1170 PRINTS P450 superfamily signature 1103 1112 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g00735 1170 Pfam KIP1-like protein 145 198 IPR011684 GO:0003779
Cma01g00735 1170 Coils Coil 345 365 - -
Cma01g00735 1170 MobiDBLite consensus disorder prediction 208 291 - -
Cma01g00735 1170 Gene3D Cytochrome P450 685 1161 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g00735 1170 Coils Coil 593 620 - -
Cma01g00735 1170 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 666 1169 - -
Cma01g00735 1170 Pfam Cytochrome P450 699 1160 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g00735 1170 Coils Coil 422 453 - -
Cma01g00735 1170 Coils Coil 291 318 - -
Cma01g00735 1170 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 666 1169 - -
Cma01g00735 1170 SUPERFAMILY Cytochrome P450 699 1168 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g00735 Cma-Chr1:3865362 Cma20g00305 Cma-Chr20:1493472 0 dispersed
Cma01g00735 Cma-Chr1:3865362 Cma01g00736 Cma-Chr1:3876924 5.81E-09 tandem
Cma01g00735 Cma-Chr1:3865362 Cma13g00011 Cma-Chr13:204953 8.56E-15 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma01g00735 K00487 - csv:101208511 919.072