Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma01g00737 ATGTGTCGAGCACAGGAGTGGGCTTATGCAGCCCTTCTGCTCCTGTGCTTCTCGTCGTCCGTACTATTGGTCGGTGCAGCAAAGGCGGTTACTCGCCCCTCCGAAGTGGACGCTTTGCTCGAGATCAAGAGAAGTTTGTTGGATCCTAATGGGAATTTGAGCAACTGGAACAGGGGAGACCCTTGCATTTCGAAATGGACTGGTGTTCTGTGCTACAGTTCCACATTGGATGATAACTATCTACATGTTTCTGAATTGCGACTTCTAAATATGAGTTTATCAGGAAATTTATCACCTGCGCTTGGTCGTTTATCTTACCTGAAAGTTTTGGACTTCATGTGGAATGAGATAACTGGGGGAATACCAGGAGAGATAGGCAATATAACGTCCTTAAGACTGTTGCTTCTAAACGGGAACCAGTTGTCAGGTTCATTGCCAGAAAATCTTGGGAATCTTGTACATTTAGACAGGATACAGATTGACCAGAACCATATATCAGGACCAATACCTAAGACATTTGCAAACTTAAAAGAAATAAGGCATTTCCACATGAACAACAACTCTATCAGTGGTGAAATCCCATCTGAGCTATCTGAATTGCCCAGTCTTATCCACATCCTCCTTGACAATAACAACATATCGGGGAAACTTCCACCAGAGTTGTTTCGATTGCTATACTTAGAAATACTACAACTTGACAACAACAACTTCAGCGGGTCCACAATACCAGATTCTTATGGGAATATGACTAACTTGCTGAAATTGAGTCTAAGGAATTGTAGTTTGCAAGGACCAATTCCTAATCTGAGCATGATAAAGAACCTGGGTTATCTGGATCTAAGTAACAATCAACTAAGTGGATTCATACCACGAGACAAGTTCTCTGAGAATATTACTACCATCATTTTATCAGACAATCGTCTTACTGGCACCATACCATCCAGTCTTTCGGATCTACCACTTCTTCAGAAATTGTCAATTGCAAATAATTCATTGAACGGCTCAGTTCCATCCTCCATATGGCAAAACAGGACGCTCAAATTTTTGGACAGCCTTACAGTAGAGCTGCAGAACAATAAATTTTCAAATATTTTTGGAAGCATTGATCTCCCTCTGAACGTCACTGTCTGGCTTCATGGAAATCCTGCTTGTTCTAATAACAGCCTGGTGCACTTCTGTGGATCTGAGCGTGAGGATATAGTTGACATTCCAACAAATAAAAGTCTTAGCTGTTCTGATTCAATATGCCCACCTCCTTATGAATGTTACTCGGCAAAATGTCCCTCATCTTGTGTCTGTTCTGCACCTCTTCTTATTGGATATCGTTTGAAAAGTCCCGGATTCTCACGTTTTAGTCCATATCAAAAAATGTTCGAGGAGTACCTGACCAATGGTCTTAAATTACATCTTGAACAATTGGACATTGGTTCTGCTGTGTGGCAAAAGGGGCCTCGATTAAGAATGAACCTGAAGCTTTTCCCTCTACATGTTGCCGGTAGCAATAGTCCTCCCTTGTTCAATGACAGCGAGGTTGTAAGAATTGTTTCCAAGTTTGCAAGTTGGAACATTTCAGATAGCGACATATTTGGACCGTACGAACTTCTCAACTTGACAATATCCGATGTTTATAAGAATGTATTTATTCCACTACCATCTGATTCTACTATGAGTAAAGGGGCATTGGCTGGAATAATATTAGGAGCAATTGCTGGTGGAGCAACGCTATCTGCAATTATTTTTATTTTTATCGTAAGATTACGTGTGAGGGGCCACCACATCTCAAGAAGGCATCGTCTGTCAAAAACCTCCATACATATTGAGGGCGTAAAGGAGTTTGGTTACCGTGAAATGGCTCTAGCTACAAACAATTTTCACGAGTCCACGGTAGTTGGTCAAGGTGGTTATGGAAAGGTTTACAAAGGAATTCTAGCAGATGGCACTGCTGTTGCTATCAAACGTGCACAGGAGGGGTCACTACAGGGTGAAAAGGAGTTCCTAACTGAAATACAATTATTGTCAAGATTACACCACCGAAATCTTGTGGCTTTGATTGGATATTGTGATGAAGAAGACGAACAGATGTTGGTTTATGAGTTCATGTCAAATGGCACGCTGAGGGATCACCTTTCTGTACGTTCTGCAAAACCTTTGAGTTTTGCCACAAGATTAAAAGCTGCCCTGGGTGCAGCTAAGGGAATTCTGTACCTTCACACGGAAGCTGATCCCCCAATATTCCACAGGGATATCAAGTCCAGCAACATATTATTAGACTCCAAATATTTGGCAAAGGTTGCTGATTTCGGACTTTCACGACTTGCACCTCTACCAGATACAGAAGGCGATGTGCCAAATCATGTATCGACGGTAGTAAAAGGGACACCGGGTTATCTTGATCCAGAGTACTTCCTGACTCGTAAATTGACAGATAAGAGTGATGTTTATAGTCTTGGTGTCGTGTTTTTGGAGATTTTAACTGGGCGGCACCCGATCTCACACGGCAAGAACATCGTCAGAGAGGTCGACCGTGCATATCAGTCTGGAAAAGTTTTCTCGATTGTCGATGGTCAACTCGGATCTTATCCCCTGGAATGTGTTGAAAGATTTGTGACTTTGGCTCTGAAATGTTGCCAAAATGAAACAGATGCACGCCCTTCAATGGCAGAAGTCGTTCGAACACTCGAAACTATCTGGCATATGCTGCCCGAGTCTGATACGAAAGTTGCAGAGCCTCCAATGACGAACGTCGTAAAAATGACCAGTCCTCCATCTTCATCATCCTACATGAATAACTATTACACATCAGAAGTCTCTGGCAGCGACCTTCTTAATCTCAGTTTGTATATAGTTTTGCAGACAAGATTGTTATTCAAATACATTAAATCATTGTATCTTCAGAGCATAGTTTTTGGTTTACTATTAGGAAATACTTTTCATGTGGTTCATGCACTTGCTAATCACAGCCCCACCGGCTCACCCCCTTCTTTCTTCTCCTCCTCCTATCTACCTTTCTCCTGCGACCCTACGCTGCCTCGCCAATCCACCATCTTCTGTAGCGGCCCCTCCATCTCTCAGGCACCCTTAGTTCAGGTCCGGGTCAATCTTCGATTAGGAATCATGGCGGATGAAGCTCAGAATGATGTGAACGATCAGGTGGCAGATATTGCACCCTTTGATCCAACTAAGAAGAAGAAGAAGAAGAAGGTTGTAATTCAGGATCCGGCTGACGAATCTGTTGACAAGTTAGCAGAGAAAACTGAAAGTTTGTCAGTTTCTGATGGCTTGGAGCCAACCACATTTTCTGGACTTAAGAAGAAGAAGAAAAAACCAGTAGAGGCCATCTCCTTGAACGACGACGGTCCGGATGCCACAGAGGATTTGGATGATCAATCAGGGGAGAATGAGGATCGAGAGGGAATTGTTCTACAGTATCGTTTTCCTTGGGAGGGAAGTGATCGCGATTATGAGTATGAGGAGCTTCTTGGACGGGTATTTAACATTCTTAGAGAGAATAATCCAGAGCTTGCAGGTGATAGGCGTAGAACAGTTATGAGGCCTCCTCAAGTTCTTCGTGAAGGCACAAAGAAAACTGTTTTCGTCAATTTCATGGATCTATGTAAAACGATGCATCGTCAGCCAGACCATGTTATGGCTTTCTTATTGGCCGAACTGGGAACCAGTGGATCTCTTGATGGACAGCAGAGATTGGTTGTTAAAGGAAGGTTTGCACCAAAGAACTTTGAAGGAATTCTGCGAAGATATGTCAATGAGTATGTTATTTGCATTGGGTGCAAGAGTCCAGACACTATCCTTTCAAAGGAGAATCGACTGTTCTTTCTCAGATGCGAGAAGTGTGGTTCTGGACGATCAGTTGCTCCAATCAAAGCCGGTTTTGTTGCTCGTGTTGGCCGTAGGAACGCTGGGACATGA 3927 42.93 MCRAQEWAYAALLLLCFSSSVLLVGAAKAVTRPSEVDALLEIKRSLLDPNGNLSNWNRGDPCISKWTGVLCYSSTLDDNYLHVSELRLLNMSLSGNLSPALGRLSYLKVLDFMWNEITGGIPGEIGNITSLRLLLLNGNQLSGSLPENLGNLVHLDRIQIDQNHISGPIPKTFANLKEIRHFHMNNNSISGEIPSELSELPSLIHILLDNNNISGKLPPELFRLLYLEILQLDNNNFSGSTIPDSYGNMTNLLKLSLRNCSLQGPIPNLSMIKNLGYLDLSNNQLSGFIPRDKFSENITTIILSDNRLTGTIPSSLSDLPLLQKLSIANNSLNGSVPSSIWQNRTLKFLDSLTVELQNNKFSNIFGSIDLPLNVTVWLHGNPACSNNSLVHFCGSEREDIVDIPTNKSLSCSDSICPPPYECYSAKCPSSCVCSAPLLIGYRLKSPGFSRFSPYQKMFEEYLTNGLKLHLEQLDIGSAVWQKGPRLRMNLKLFPLHVAGSNSPPLFNDSEVVRIVSKFASWNISDSDIFGPYELLNLTISDVYKNVFIPLPSDSTMSKGALAGIILGAIAGGATLSAIIFIFIVRLRVRGHHISRRHRLSKTSIHIEGVKEFGYREMALATNNFHESTVVGQGGYGKVYKGILADGTAVAIKRAQEGSLQGEKEFLTEIQLLSRLHHRNLVALIGYCDEEDEQMLVYEFMSNGTLRDHLSVRSAKPLSFATRLKAALGAAKGILYLHTEADPPIFHRDIKSSNILLDSKYLAKVADFGLSRLAPLPDTEGDVPNHVSTVVKGTPGYLDPEYFLTRKLTDKSDVYSLGVVFLEILTGRHPISHGKNIVREVDRAYQSGKVFSIVDGQLGSYPLECVERFVTLALKCCQNETDARPSMAEVVRTLETIWHMLPESDTKVAEPPMTNVVKMTSPPSSSSYMNNYYTSEVSGSDLLNLSLYIVLQTRLLFKYIKSLYLQSIVFGLLLGNTFHVVHALANHSPTGSPPSFFSSSYLPFSCDPTLPRQSTIFCSGPSISQAPLVQVRVNLRLGIMADEAQNDVNDQVADIAPFDPTKKKKKKKVVIQDPADESVDKLAEKTESLSVSDGLEPTTFSGLKKKKKKPVEAISLNDDGPDATEDLDDQSGENEDREGIVLQYRFPWEGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICIGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNAGT 1308
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3882381 3910503 - CmaCh01G007370.1 Cma01g00737 286430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma01g00737 1308 Pfam Protein kinase domain 624 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma01g00737 1308 SMART serkin_6 624 898 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma01g00737 1308 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 1153 1260 IPR016189 GO:0003743|GO:0006413
Cma01g00737 1308 Gene3D Phosphorylase Kinase; domain 1 595 699 - -
Cma01g00737 1308 MobiDBLite consensus disorder prediction 1118 1132 - -
Cma01g00737 1308 Gene3D Transferase(Phosphotransferase) domain 1 700 910 - -
Cma01g00737 1308 Gene3D - 1151 1293 - -
Cma01g00737 1308 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 15 931 - -
Cma01g00737 1308 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 1257 1292 IPR016190 GO:0003743|GO:0006413
Cma01g00737 1308 ProSitePatterns Protein kinases ATP-binding region signature. 630 652 IPR017441 GO:0005524
Cma01g00737 1308 CDD STKc_IRAK 630 896 - -
Cma01g00737 1308 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Cma01g00737 1308 ProSitePatterns Serine/Threonine protein kinases active-site signature. 744 756 IPR008271 GO:0004672|GO:0006468
Cma01g00737 1308 SMART eIF2Bneu4 1178 1287 IPR002735 GO:0003743|GO:0006413
Cma01g00737 1308 Pfam Leucine rich repeat 154 213 IPR001611 GO:0005515
Cma01g00737 1308 Pfam Domain found in IF2B/IF5 1178 1286 IPR002735 GO:0003743|GO:0006413
Cma01g00737 1308 MobiDBLite consensus disorder prediction 1099 1114 - -
Cma01g00737 1308 MobiDBLite consensus disorder prediction 1079 1135 - -
Cma01g00737 1308 SUPERFAMILY Protein kinase-like (PK-like) 610 932 IPR011009 -
Cma01g00737 1308 ProSiteProfiles Protein kinase domain profile. 624 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma01g00737 1308 SMART LRR_typ_2 200 224 IPR003591 -
Cma01g00737 1308 SMART LRR_typ_2 272 296 IPR003591 -
Cma01g00737 1308 SMART LRR_typ_2 319 343 IPR003591 -
Cma01g00737 1308 SMART LRR_typ_2 128 152 IPR003591 -
Cma01g00737 1308 SUPERFAMILY L domain-like 48 410 - -
Cma01g00737 1308 Gene3D Ribonuclease Inhibitor 31 294 IPR032675 -
Cma01g00737 1308 Gene3D Ribonuclease Inhibitor 295 385 IPR032675 -
Cma01g00737 1308 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 15 931 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma01g00737 Cma13g00010 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g00737 Cma-Chr1:3882381 Cma03g00280 Cma-Chr3:3750096 0 dispersed
Cma04g00487 Cma-Chr4:2482425 Cma01g00737 Cma-Chr1:3882381 6.84E-74 dispersed
Cma05g00482 Cma-Chr5:2273133 Cma01g00737 Cma-Chr1:3882381 1.57E-07 dispersed
Cma12g00141 Cma-Chr12:614875 Cma01g00737 Cma-Chr1:3882381 4.86E-07 dispersed
Cma13g00010 Cma-Chr13:194995 Cma01g00737 Cma-Chr1:3882381 1.18E-156 transposed
Cma01g00737 Cma-Chr1:3882381 Cma13g00009 Cma-Chr13:181558 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68262 PF00069 Pkinase 1.80E-47 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma01g00737 - - csv:101208136 1503.8