Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cma01g01129 ATGTTCGAGAACAATCCTGACCCCTTTCGAATGCGAATTCGTGGTGGAAACAAATGGATTCTTGCCGCTTTCCCCAAAATCTCTATAAATAATCCCCATACCGCTGGGCGTTGGTCTCATCATTCGTTGTCCGTTCTCTGTTCTTCACTACCTTCTCACGTCCAAATCCCATCCGCTTACGATCCATTCGCAGACGCCAAGGATTCCGATGCCCCGGGAGGCAAAGAGTATGTTCATATCCGCGTGCAGCAGAGAAATGGCAAGAAGTGCTTGACAACAGTCCAGGGTCTGAAGAAGGATTTCAGCTACGAGAAGATCCTCAAAGACGTGAAGAAGGAGTTCTGTTGTAATGGTAACGTCGTCCAAGACAAAGAACTGGGGAAGATAATTCAGCTTCAAGGCGATCAGCGCAAGAACGTGTCTCAGTTCCTGGTTCAGGCTGGGATTGTGAAGAAGGATCAGATCAAGATCCATGGATTTTAA 483 47.41 MFENNPDPFRMRIRGGNKWILAAFPKISINNPHTAGRWSHHSLSVLCSSLPSHVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 160
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 8277250 8278581 + CmaCh01G011290.1 Cma01g01129 286822
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cma01g01129 160 Pfam Translation initiation factor SUI1 75 149 IPR001950 GO:0003743|GO:0006413
Cma01g01129 160 CDD eIF1_SUI1 76 159 IPR005874 GO:0003743
Cma01g01129 160 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 54 160 IPR005874 GO:0003743
Cma01g01129 160 PANTHER BNAA10G09260D PROTEIN 53 160 - -
Cma01g01129 160 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 53 160 - -
Cma01g01129 160 ProSiteProfiles Translation initiation factor SUI1 family profile. 78 148 IPR001950 GO:0003743|GO:0006413
Cma01g01129 160 SUPERFAMILY eIF1-like 49 160 IPR036877 GO:0003743|GO:0006413
Cma01g01129 160 Gene3D - 41 160 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Cma01g01129 Cma09g00955 CST
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g01129 Cma-Chr1:8277250 Cma19g00930 Cma-Chr19:8319318 7.61E-60 dispersed
Cma01g01129 Cma-Chr1:8277250 Cma09g00955 Cma-Chr9:4806670 2.12E-69 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma01g01129 K03113 - csv:101202908 211.46