Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma01g01131 | ATGCTATGCTTGTGCATTGAGATGTTCTTGTGTATTCTTGTTCTTGGTTATGTTCTGCTAGTGATTCCATTGCTTATTTGTGTAATAGTTACTCATACTATGGAAGGTACAATTCTTAGAAGGGTTATTCCATCAGACAACAGTTGCCTCTTCAATGCTGTTGGTTATGTTATGGACCATGACAAAGACAAGGCTACCGAGCTAAGACAGGTCATAGCTGCAACAGTAGCCAGTGATCCAACAAGGTATTCTGAAGCATTTCTTGGAAAGCCAAATGAGGAGTACTGTGCTTGGATTCTTGATTCAGAGAAGTGGGGAGCATTAGATTATGGGTTTCTGAATCGAAATCTATATTACTCAAGAGGAAGCGCCATTGAGCTTTCGATACTATCCGAATATTATGGACGTGAAATTGCAGCATATGACATCCAGACGACACGATGTGATTTGTATGGTCAGGAAAAGAAGTATTCAGAAAGGGTTCTGCTGATATATGACGGACTCCACTATGATGCTTTAGTTATGTCGCCATTTGAGGGAGCTCCAGAAGAATTTGATCAGACCATATTTTCTGTGAATAGAGACAGGAGCATTGGGCCCATTGAGGAGCAAGCTCTTCATTTTGTAAAAGAGCAGCAAAGGAAACGGAGCTTCACCGACACTGCCAACTTCACTCTGCGCTGTGGGGTTTGCCAAATTGGAGTCATCGGCCAAACGGAGGCTGTAGAACACGCAAAAGCAACGGGTCATGTCAACTTTCAGGAGTATAGATGA | 774 | 42.51 | MLCLCIEMFLCILVLGYVLLVIPLLICVIVTHTMEGTILRRVIPSDNSCLFNAVGYVMDHDKDKATELRQVIAATVASDPTRYSEAFLGKPNEEYCAWILDSEKWGALDYGFLNRNLYYSRGSAIELSILSEYYGREIAAYDIQTTRCDLYGQEKKYSERVLLIYDGLHYDALVMSPFEGAPEEFDQTIFSVNRDRSIGPIEEQALHFVKEQQRKRSFTDTANFTLRCGVCQIGVIGQTEAVEHAKATGHVNFQEYR | 257 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 8282139 | 8286583 | + | CmaCh01G011310.1 | Cma01g01131 | 286824 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma01g01131 | 257 | Gene3D | - | 27 | 222 | - | - | |
Cma01g01131 | 257 | PANTHER | HIV-INDUCED PROTEIN-7-LIKE PROTEASE | 35 | 255 | IPR039138 | GO:0004843|GO:0016579|GO:0030433|GO:0101005 | |
Cma01g01131 | 257 | PANTHER | UBIQUITIN THIOESTERASE OTU1 | 35 | 255 | - | - | |
Cma01g01131 | 257 | ProSiteProfiles | OTU domain profile. | 38 | 176 | IPR003323 | - | |
Cma01g01131 | 257 | SUPERFAMILY | Cysteine proteinases | 40 | 174 | IPR038765 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma01g01131 | Cma-Chr1:8282139 | Cma09g00954 | Cma-Chr9:4795337 | 3.72E-80 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma01g01131 | K13719 | - | csv:101222942 | 390.193 |