Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma01g01155 ATGACATTTCAACGACTTATGGGTATTGCAAAAAGGAGATGTTTGGTTGTTTTTGTGATTCTCATATGTGCTTCTTTAGCAACTTGCTTTAAGGACCATGAGGAAGAGGAACTGATTCTGAGCCAACTAGCTGACCCAATTACTGGGGATGTCAATATAGAGATGGCTGAGCTGTTATTGGTGAAGTGCAACTTGGATTTCTTTCAGTTGAATGAAGATGTAGTTGGTACTGATTCGTGCTCTGAAGAAAAACCGAGAAGCACAGATGGAATTAATTTCGAATGCCGGACGCTTGCAAAAGAAAAAACAAACAGAATGCTAAGTTCCATGCATCCCCAGATGAAGCAGGCTCTTTTAGATTGTGTAAGAAAGAATTTTCATGTCTCCGGGAGAGACTATAATTCTGAAGCTTGGTACACCCGATATCTGGAGTCATTGCTTTTTATGCCTGGTAGTTTTAGAAGGAAGTTAAGTTCTAGATGGCTTCGAAGTGCTGAAGAAGAGCCCGCTCTGGCACCTGAATCTTCAGATCCTGTATCTCCCCCCCGTCATAAAAGAAAACCATTTTTTCCACCAGATTCTGGAAATTCAAGTCAATCTTCAGGAGATGAAACTCCTGTAAGAAAAGCTTCTAGCACAGGTGGACAAAAGGAAAAGAAATCTAATCATCAGCAAACAGTTATTTTAGCTGTTGTCATAACAGCAACAGTGACTTTTATTATTGTAGCTTTGCTCTTTTTATGCTATAATAAGAGTGTTTCCAGAATGAAGCAAAATGATGAAAATCATGAAAGGCCTCTCCTAAGCTTGAGCTTAAGTTCTTCGCCCAAGTATTCTGCCTTTGGGAATTCTATTAAGGAAGACGTGCTCATCAATCAAGCATCTAACTTGAATCACCACCAGAGAGCTCCATCTTTGGATGGTAACCTGCACATTGTCTCCGATGGTGCACATACCTCAATGCAGGGACATCCAGCTTTTGGAGATGCTGGAATTGCCAATAACGCATCTTTTGAATCAACTTATATGGCTGATGGTACTACTGGCTTGGTGCCACTTCCTCCTGGAGCAGTGCCAGTCAACTCAGAGATTATACCACCTCTGAAGCCCCCTCCTGGCAGGGCGATTCCCCTGCCTCCTGGCAGGACTGTTCCCCTGCCTCCTGGCAAGACTGTTCCCCTGCCTCCTGGCAAGACTGTTCCCCTGCCTCCTGGCAGGGCTGCTGCTCCCCTTCCTCCTGAGCCCCCTTCGTCCTTTAAGTCACCATCCAGCATGAGTAGTTCTCCTCCTCCTCCACCTCCTGCACCTGGTGCTCCACCACCAGGACCTCCTGGAAATTCAGGTCGCCCTCCTGGACCCCCTCTACCTCCAGCATCTGGACCAGGCAACAAAGCAGGCCCTCCCCCACCACCACCTCCTAAAGGTGGTGGTGGTAGTGGTCCACCTCGACCACCACCTCCAGGAGCACCCAAAGGTGTAAATCCACCTCGACCTCCAAGACCTTTTGGACGTGATGATGAAGGTATGGACGAATCGGGTGTTCCCAAAGCCAAATTGAAACCATTTTTCTGGGACAAAGTTCTTGCAAACCCTGATGATTCCATGGTCTGGCATCAGATAAAAGCAGGATCTTTCCAATTCAACGAGGAGATGATAGAAACTCTTTTTGGATATACACCAGTTGATAGAAACAAAAGTGAGGGAAAGAAGGAGGCATCATCACAAGATCCTGCGCACCAGTTCATTCAGATCATTGATTCAAAGAAAGCACAAAATTTGTCCATTCTTTTGCGGGCACTAAATGTGACAAAAGAAGAAGTTTGTGATGCGCTTCATGAAGGAGGTGAACTTCCTGCCGAACTTCTTGAAAACTTACTGAGGATGGCACCAACACCAGAAGAAGAACTCAAGCTTAGACTGTTTAGTGGGGAACTTACTCAACTTGGAAATGCCGAGCGTTTCCTTAAAAGTTTGGTTGATATCCCATTTGCTTTCAAAAGGTTGGAATCGCTGCTTTTCATGGGCACTCTCCAGGAGGACATCAACATCACTAAGGAGTCCTTTGTTAACTTGGAGATTGCTTGCAAGGAACTTCGGAGCAGCAGGCTGTTCCTCAAACTTCTAGAAGCTGTTCTTAAGACGGGAAACCGGATGAACGATGGAACTTTTCGAGGTGGTGCACAAGCATTCAAATTGGACACTCTTTTAAAATTGTCAGATGTGAAAGGAAAAGATGGCAAGACTACGCTATTGCACTTTGTAGTCCAGGAGATAATTCGTACAGAAGGGATAAGAGCTGCGAGGAACGCCACAGGAAGCCATAGCTTCTCGAGCACCACATCAAATGATCTGCTGGATGAAACACCTGACGATGTGGAAGAGCATTACCGTACCCTTGGTCTTGAGGTCGTCTCAGGGTTAAGTGGTGAACTTCAGAATGTGAAGAAAGCAGCAACCATAGATGCTGATGCCTTAACTGGAACTGTTTCCAAACTTGGGCATGCACTCTTAAAATCAAGAGACTTTCTGAACAAAGATATGCAGGGTTTAGGTGAGGAGAGTCAGTTTCACGAAACCCTGAAAAGCTTTTTGCAGAATGCTGAGGTTGCTATCATGGCCCTCTTGGCAGAAGAAAAAAAAATCATGGAAATGGTGAAAAGCACAGGTGACTACTTCCATGGAAATGCAGGGAAGGACGAGGGCTTACGGTTGTTCGTAATAGTGCGAGATTTCTTGGTAATGATAGATAAAACATGTCGAGAAATAAAGGATGCACAGAAGAAGCAGGTGAAGGTACACAAACAGGCAGTATCTTCTGATAGCAATCACCCCCCTTCAACTCCAGTTCCCCCTGTTCCTCCTGCTGATCTTCCTCCTGTTCCTCCCGCTGATCTTCCCCCTTCAACTCCAGCTCCCTCTGATCTTCCCGCTGATCATCCCCCCGTTTCTCCCACTGATCTTCCCCCTTCAACACCAGTTCCCTCTGATCTTCCCTCTGATCGCCCCCCCGTACCTCCTGCTGATCTTCCCCCTTCAACTCCAGTTTCCTCTGCTCCTCCTCTCCCTTCAACTCCAGCTCCCTCTGCTCCCTCTGCTCCTTCTGCTCCTTCTGCTCCTCCCCCTTCAACTCCAGTTCCCTCTGCTCCGCCTCCCCCTTCAACTCCAGCTCCCTCTGCTCCTTCTGCTCCTCCTCCCCCTTCAACTCCAGTTCCCTCTGCTCCGCCTCCCCCTTCAACTCCAGCTCCCTCTGCTCCTCCTCCCCCTTCAACTCCAGTTCCCTCTGCTCCTCCTCCCCCTTCACCTCCAGTTCCCACTGCTCTTCCCCCTGTTCGTCCCCCTGATCTACGACACGCGCCTTCTGCCGATCTGAATCAACTGATCTTCCCAGCAATTACTGATCGTAGGATCAGTGACTCAAGTTCAGACGAGGAGAGTCCATAG 3441 47.49 MTFQRLMGIAKRRCLVVFVILICASLATCFKDHEEEELILSQLADPITGDVNIEMAELLLVKCNLDFFQLNEDVVGTDSCSEEKPRSTDGINFECRTLAKEKTNRMLSSMHPQMKQALLDCVRKNFHVSGRDYNSEAWYTRYLESLLFMPGSFRRKLSSRWLRSAEEEPALAPESSDPVSPPRHKRKPFFPPDSGNSSQSSGDETPVRKASSTGGQKEKKSNHQQTVILAVVITATVTFIIVALLFLCYNKSVSRMKQNDENHERPLLSLSLSSSPKYSAFGNSIKEDVLINQASNLNHHQRAPSLDGNLHIVSDGAHTSMQGHPAFGDAGIANNASFESTYMADGTTGLVPLPPGAVPVNSEIIPPLKPPPGRAIPLPPGRTVPLPPGKTVPLPPGKTVPLPPGRAAAPLPPEPPSSFKSPSSMSSSPPPPPPAPGAPPPGPPGNSGRPPGPPLPPASGPGNKAGPPPPPPPKGGGGSGPPRPPPPGAPKGVNPPRPPRPFGRDDEGMDESGVPKAKLKPFFWDKVLANPDDSMVWHQIKAGSFQFNEEMIETLFGYTPVDRNKSEGKKEASSQDPAHQFIQIIDSKKAQNLSILLRALNVTKEEVCDALHEGGELPAELLENLLRMAPTPEEELKLRLFSGELTQLGNAERFLKSLVDIPFAFKRLESLLFMGTLQEDINITKESFVNLEIACKELRSSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLSDVKGKDGKTTLLHFVVQEIIRTEGIRAARNATGSHSFSSTTSNDLLDETPDDVEEHYRTLGLEVVSGLSGELQNVKKAATIDADALTGTVSKLGHALLKSRDFLNKDMQGLGEESQFHETLKSFLQNAEVAIMALLAEEKKIMEMVKSTGDYFHGNAGKDEGLRLFVIVRDFLVMIDKTCREIKDAQKKQVKVHKQAVSSDSNHPPSTPVPPVPPADLPPVPPADLPPSTPAPSDLPADHPPVSPTDLPPSTPVPSDLPSDRPPVPPADLPPSTPVSSAPPLPSTPAPSAPSAPSAPSAPPPSTPVPSAPPPPSTPAPSAPSAPPPPSTPVPSAPPPPSTPAPSAPPPPSTPVPSAPPPPSPPVPTALPPVRPPDLRHAPSADLNQLIFPAITDRRISDSSSDEESP 1146
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8438441 8445699 + CmaCh01G011550.1 Cma01g01155 286848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma01g01155 1146 PANTHER FORMIN-RELATED 422 936 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Cma01g01155 1146 PANTHER FORMIN-RELATED 11 422 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Cma01g01155 1146 SMART it6_source 381 929 IPR015425 -
Cma01g01155 1146 Pfam Formin Homology 2 Domain 515 914 IPR015425 -
Cma01g01155 1146 PANTHER FORMIN-LIKE PROTEIN 3 11 422 - -
Cma01g01155 1146 MobiDBLite consensus disorder prediction 364 515 - -
Cma01g01155 1146 MobiDBLite consensus disorder prediction 166 223 - -
Cma01g01155 1146 MobiDBLite consensus disorder prediction 926 1146 - -
Cma01g01155 1146 ProSiteProfiles Formin homology-2 (FH2) domain profile. 509 941 IPR015425 -
Cma01g01155 1146 PANTHER FORMIN-LIKE PROTEIN 3 422 936 - -
Cma01g01155 1146 MobiDBLite consensus disorder prediction 364 499 - -
Cma01g01155 1146 MobiDBLite consensus disorder prediction 192 223 - -
Cma01g01155 1146 MobiDBLite consensus disorder prediction 500 514 - -
Cma01g01155 1146 Gene3D Formin, FH2 domain 514 943 IPR042201 -
Cma01g01155 1146 SUPERFAMILY Formin homology 2 domain (FH2 domain) 580 935 - -
Cma01g01155 1146 MobiDBLite consensus disorder prediction 944 1115 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma01g01155 Cma09g00921 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g01155 Cma-Chr1:8438441 Cma02g00531 Cma-Chr2:2928979 1.45E-122 dispersed
Cma01g01155 Cma-Chr1:8438441 Cma02g00145 Cma-Chr2:691274 8.78E-168 wgd
Cma01g01155 Cma-Chr1:8438441 Cma20g00639 Cma-Chr20:2975163 1.71E-175 wgd
Cma01g01155 Cma-Chr1:8438441 Cma09g00921 Cma-Chr9:4588568 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma01g01155 - - cmos:111446349 875.159