Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma01g01157 ATGCCAACAGTTTGGTTTTCTTTGAAAAAGTCCTTCCCCTGCAAACCAGAGCCATCAGAAGTCTATGATCCAAAGAGCAGGAAACAACTCAACACAATCACAACCAAGAAAGCAGCCAATAAGTCAGGGTGTTCTTCTGGAAGATCAGGTTGTTCAAGGTCCATAGCAAATCTTAAAGATGTCATCCATGGAAGCAAGAGACACATGGAAAATCCACCGATTTGTAGCCCGAGATCGATCGGTAGCAGCGAGTTTCTCAACCCGATTGCTCATGAAGTGATACTCAGCAACTCCAAGTGTGAGCTCAAGATCACTGGTTTTGGTGGCTTCCACTTAGAGGGTGTGGGAAATTCTGGCTTTGGAGGAGGTGGGGGCGGAGATTTGCCGTTTTTTGGTACTCATAGGCCCGGAACTCCCGGTCCGGGGGAGAACTTTGCTATCAACTCCAACTCCATGACTTCTGCAAGAAAGCTTCCTTCTCCTTTATCTTATATGGATGCCTCTCCAGCTGGGAGTACTACAAAATTTAAGGGGGGTAGGGAAGTTCATACAAGCAGAAGGTTCTCGCCGCTAACCAAGTCGAGCGATAACACGTTCTCGGCAGTTACTTGCCATAAATGTGGAGAACAGTTCTGCAAATTGGAGGCTGCTGAGTCTCACCATCTCTCCAAGCATGCTGTTACTGAGCTTGTGGAGGGTGATTCATCGAGGAAAATCGTCGAAATGATATGTCAAACGAACTTTTCAAAGTCGGAGAACAATGGAAACCGAATCGAACGAGTTTTCAAAGTTCACAATATGCAGAAAACATTAGCTGGATTTGAAGAATACAGAGAAACAGTGAAGATCAAAGCAAGCAAGCTCTCAAAGAAACACCCTCGATGCCTCGTCGATGGGAACGAGCTATTGAGGTTTTTCGGGACGACTTTAGCTTGCTCTCTTGGACTAAATGGCTCCACCAGCCTCTGCATATCACAGAAATGCAATGTCTGCAGAATCATAAGGAATGGTTTCTCAGAAAAGAAGGATATGAAAGAAGTAGGAGTTTTTACGACTTCAACGAGCGGAAAAGCTTTCGAAACCATTGAAACGGAGAACGAAAGCTCGGTGAAGAAAGCATTGATAATCTGTAGAGTGATAGCTGGGAGAGTTCATAGGCCATTGGAGAACATACAAGATATTGTTGGGCAAACAGGGTTTGATTCTTTGGCTGGGAAAGTGGGATTACATTCCAACATTCAAGAGCTTTATTTGCTTAATCATAGAGCTTTGCTTCCTTGTTTTGTTGTAATTTTCAAACCATGA 1305 44.21 MPTVWFSLKKSFPCKPEPSEVYDPKSRKQLNTITTKKAANKSGCSSGRSGCSRSIANLKDVIHGSKRHMENPPICSPRSIGSSEFLNPIAHEVILSNSKCELKITGFGGFHLEGVGNSGFGGGGGGDLPFFGTHRPGTPGPGENFAINSNSMTSARKLPSPLSYMDASPAGSTTKFKGGREVHTSRRFSPLTKSSDNTFSAVTCHKCGEQFCKLEAAESHHLSKHAVTELVEGDSSRKIVEMICQTNFSKSENNGNRIERVFKVHNMQKTLAGFEEYRETVKIKASKLSKKHPRCLVDGNELLRFFGTTLACSLGLNGSTSLCISQKCNVCRIIRNGFSEKKDMKEVGVFTTSTSGKAFETIETENESSVKKALIICRVIAGRVHRPLENIQDIVGQTGFDSLAGKVGLHSNIQELYLLNHRALLPCFVVIFKP 434
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8450329 8451898 + CmaCh01G011570.1 Cma01g01157 286850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma01g01157 434 PANTHER - 2 434 - -
Cma01g01157 434 SUPERFAMILY ADP-ribosylation 227 433 - -
Cma01g01157 434 Gene3D - 230 433 - -
Cma01g01157 434 ProSitePatterns Zinc finger C2H2 type domain signature. 204 225 IPR013087 -
Cma01g01157 434 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 434 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma01g01157 Cma09g00919 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g01157 Cma-Chr1:8450329 Cma04g00922 Cma-Chr4:4757288 0 dispersed
Cma01g01157 Cma-Chr1:8450329 Cma03g00511 Cma-Chr3:4962715 1.69E-62 wgd
Cma01g01157 Cma-Chr1:8450329 Cma09g00919 Cma-Chr9:4582915 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma01g01157 - - csv:101213316 728.398