Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma01g01279 | ATGAATAGAAAGATGGAGGAGGTTAATAGAGAAATAAATAGTATGGTTTGGGGAATTATAAGCAAGAGACAAATGGCTATGGAGGCTGCTCAAGTTTCTAATAATGCTGATCTTCTAGGGATCCTTTTGGAAGAAAATAAGAAAGATGCTGTTGGGATGTCCATGGAAGATATCATTAGTGAGTGCAAGCTTTTTTATTTTGCTGGCCAAGAAACAACCGCCTCGTTGCTTGTTTGGACAATGGTTCTACTTGGTCGGTATTCAGAATGGCAAGATCAAGCAAGAGCGGAAGTGCTCAATGTTTTTGGTGAAGACAAGAAAGTGGATTTCGATGGTTTAAGTCGTCTCAAAGTAGTGAGTATGATACTATATGAAGTTCTTAGGTTATATCCTCCCGTTGGGATCTTAGCTCGAGGAATACACAAGGAAACAAAGCTTGGAAACTTATTATTGCCGGGTGGGGTGTCAATAGGTATACCAATCATTCATATCCACCACGATCACCAAATATGGGGTGAAGATGCAGATGAGTTCAAGCCAAAGAGGTTTTCAGAAGGAATTTCCAAAGCAACGAACAATAAAGTTTGCTTCCTACCATTTGGATGGGGTCCTCGAATTTGTGTTGGTCAAAACTTCGCCATGATTGAAGCAAAAATAGCACTATCAATGATTTTGCAGCGCTTCTCCTTCCAACTTTCCCCATATTATACTCACGCCCCTGCTTCAAATGTCACTGTTCAACCACAACATGGAGCTCATCTCATCCTCCGTAAGCTCTAA | 780 | 40.77 | MNRKMEEVNREINSMVWGIISKRQMAMEAAQVSNNADLLGILLEENKKDAVGMSMEDIISECKLFYFAGQETTASLLVWTMVLLGRYSEWQDQARAEVLNVFGEDKKVDFDGLSRLKVVSMILYEVLRLYPPVGILARGIHKETKLGNLLLPGGVSIGIPIIHIHHDHQIWGEDADEFKPKRFSEGISKATNNKVCFLPFGWGPRICVGQNFAMIEAKIALSMILQRFSFQLSPYYTHAPASNVTVQPQHGAHLILRKL | 259 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 9202397 | 9204828 | - | CmaCh01G012790.1 | Cma01g01279 | 286972 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma01g01279 | 259 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 200 | 209 | IPR017972 | GO:0005506|GO:0016705 | |
Cma01g01279 | 259 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 1 | 250 | - | - | |
Cma01g01279 | 259 | PRINTS | P450 superfamily signature | 198 | 207 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g01279 | 259 | PRINTS | P450 superfamily signature | 68 | 85 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g01279 | 259 | PRINTS | P450 superfamily signature | 121 | 132 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g01279 | 259 | PRINTS | P450 superfamily signature | 207 | 218 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g01279 | 259 | Gene3D | Cytochrome P450 | 1 | 259 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g01279 | 259 | PRINTS | E-class P450 group I signature | 57 | 74 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g01279 | 259 | PRINTS | E-class P450 group I signature | 77 | 103 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g01279 | 259 | PRINTS | E-class P450 group I signature | 207 | 230 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g01279 | 259 | PRINTS | E-class P450 group I signature | 197 | 207 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g01279 | 259 | PRINTS | E-class P450 group I signature | 120 | 138 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g01279 | 259 | PANTHER | CYTOCHROME P450 72A11-RELATED | 1 | 250 | - | - | |
Cma01g01279 | 259 | SUPERFAMILY | Cytochrome P450 | 2 | 257 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g01279 | 259 | Pfam | Cytochrome P450 | 1 | 234 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma01g01279 | Cma-Chr1:9202397 | Cma11g01020 | Cma-Chr11:5532841 | 1.66E-146 | dispersed | |
Cma01g01279 | Cma-Chr1:9202397 | Cma09g00686 | Cma-Chr9:3235370 | 1.95E-49 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma01g01279 | - | - | cmos:111432119 | 380.948 |