Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma01g01279 ATGAATAGAAAGATGGAGGAGGTTAATAGAGAAATAAATAGTATGGTTTGGGGAATTATAAGCAAGAGACAAATGGCTATGGAGGCTGCTCAAGTTTCTAATAATGCTGATCTTCTAGGGATCCTTTTGGAAGAAAATAAGAAAGATGCTGTTGGGATGTCCATGGAAGATATCATTAGTGAGTGCAAGCTTTTTTATTTTGCTGGCCAAGAAACAACCGCCTCGTTGCTTGTTTGGACAATGGTTCTACTTGGTCGGTATTCAGAATGGCAAGATCAAGCAAGAGCGGAAGTGCTCAATGTTTTTGGTGAAGACAAGAAAGTGGATTTCGATGGTTTAAGTCGTCTCAAAGTAGTGAGTATGATACTATATGAAGTTCTTAGGTTATATCCTCCCGTTGGGATCTTAGCTCGAGGAATACACAAGGAAACAAAGCTTGGAAACTTATTATTGCCGGGTGGGGTGTCAATAGGTATACCAATCATTCATATCCACCACGATCACCAAATATGGGGTGAAGATGCAGATGAGTTCAAGCCAAAGAGGTTTTCAGAAGGAATTTCCAAAGCAACGAACAATAAAGTTTGCTTCCTACCATTTGGATGGGGTCCTCGAATTTGTGTTGGTCAAAACTTCGCCATGATTGAAGCAAAAATAGCACTATCAATGATTTTGCAGCGCTTCTCCTTCCAACTTTCCCCATATTATACTCACGCCCCTGCTTCAAATGTCACTGTTCAACCACAACATGGAGCTCATCTCATCCTCCGTAAGCTCTAA 780 40.77 MNRKMEEVNREINSMVWGIISKRQMAMEAAQVSNNADLLGILLEENKKDAVGMSMEDIISECKLFYFAGQETTASLLVWTMVLLGRYSEWQDQARAEVLNVFGEDKKVDFDGLSRLKVVSMILYEVLRLYPPVGILARGIHKETKLGNLLLPGGVSIGIPIIHIHHDHQIWGEDADEFKPKRFSEGISKATNNKVCFLPFGWGPRICVGQNFAMIEAKIALSMILQRFSFQLSPYYTHAPASNVTVQPQHGAHLILRKL 259
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 9202397 9204828 - CmaCh01G012790.1 Cma01g01279 286972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma01g01279 259 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 200 209 IPR017972 GO:0005506|GO:0016705
Cma01g01279 259 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 250 - -
Cma01g01279 259 PRINTS P450 superfamily signature 198 207 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01279 259 PRINTS P450 superfamily signature 68 85 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01279 259 PRINTS P450 superfamily signature 121 132 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01279 259 PRINTS P450 superfamily signature 207 218 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01279 259 Gene3D Cytochrome P450 1 259 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01279 259 PRINTS E-class P450 group I signature 57 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01279 259 PRINTS E-class P450 group I signature 77 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01279 259 PRINTS E-class P450 group I signature 207 230 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01279 259 PRINTS E-class P450 group I signature 197 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01279 259 PRINTS E-class P450 group I signature 120 138 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01279 259 PANTHER CYTOCHROME P450 72A11-RELATED 1 250 - -
Cma01g01279 259 SUPERFAMILY Cytochrome P450 2 257 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01279 259 Pfam Cytochrome P450 1 234 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g01279 Cma-Chr1:9202397 Cma11g01020 Cma-Chr11:5532841 1.66E-146 dispersed
Cma01g01279 Cma-Chr1:9202397 Cma09g00686 Cma-Chr9:3235370 1.95E-49 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma01g01279 - - cmos:111432119 380.948