Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma01g01364 | ATGCAGTTATATCATCATCCATACTCTTTGAACAGCCAGAAGGTGAGACTTGCCCTGGAAGAGCAAGGCATCGACTACACGTCGTATCATGTCAATCCTATCATGGCCAAGAACATGGACTCCTCGTTCTTCAAGATGAACCCGAGTGCAAAACTTCCCGTCTTTCAAAATGGTTCCCACGTCATTTTCGACACAATCGAGATAATTCAGTATATAGAGAGAATTGCAGTTGTATCCTCGGGAACCGAGGACGTAATGCCGAGTAACAGAGAAGTTGTTGAGTGGATGCATAAGATACAACAATGGAATCCAAAGTTTTTCACTCTCGCCCACGTGCCTGAGAAGTACCGACTTACCGTGACCAAATTTGTAAGGCGTGTCATTATCAGTCGGATGGCCGAAACTCCTGAAATGGCAGCTGCATACCATCATAAGCTCAGAGAAGCATATGAGACAGAAGACAAACTGAAAAACAAAACTGTTATCAAACAAAGCACAGATCATTTAGTGAGACTTCTCGACGAAATCGAGTCGAAGCTAGGCGAAACTGCATTCCTGGCAGGGGAAGAGTTCACCATGGCTGATGCCGTGCTCATCCCGGTGCTGGCTCGACTCGAGCTGTTGAAGGTGGCGGACGAGTATATAGGAGGCAGCAGCAGCAGACCAAACATTGCAGAATATTGGATGTTGGTGCAGCAGAGGCCAAGCTATAAGAAGGTGATTGGAAAGTATTTCAAGGGATGGAGAAAGCACAAAACACTTATGAAAACATGGTGCTTTCTTCATATCAGAACCTTGCTAAGGAGATATTGA | 813 | 45.26 | MQLYHHPYSLNSQKVRLALEEQGIDYTSYHVNPIMAKNMDSSFFKMNPSAKLPVFQNGSHVIFDTIEIIQYIERIAVVSSGTEDVMPSNREVVEWMHKIQQWNPKFFTLAHVPEKYRLTVTKFVRRVIISRMAETPEMAAAYHHKLREAYETEDKLKNKTVIKQSTDHLVRLLDEIESKLGETAFLAGEEFTMADAVLIPVLARLELLKVADEYIGGSSSRPNIAEYWMLVQQRPSYKKVIGKYFKGWRKHKTLMKTWCFLHIRTLLRRY | 270 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 9715391 | 9719290 | + | CmaCh01G013640.1 | Cma01g01364 | 287057 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma01g01364 | 270 | CDD | GST_N_family | 1 | 73 | - | - | |
Cma01g01364 | 270 | Pfam | Glutathione S-transferase, N-terminal domain | 3 | 74 | IPR004045 | - | |
Cma01g01364 | 270 | SUPERFAMILY | Thioredoxin-like | 1 | 74 | IPR036249 | - | |
Cma01g01364 | 270 | SFLD | Glutathione Transferase (cytosolic) | 1 | 234 | IPR040079 | - | |
Cma01g01364 | 270 | Gene3D | - | 118 | 241 | - | - | |
Cma01g01364 | 270 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 118 | 254 | IPR010987 | - | |
Cma01g01364 | 270 | Gene3D | Glutaredoxin | 1 | 102 | - | - | |
Cma01g01364 | 270 | SFLD | Main (cytGST) | 1 | 234 | - | - | |
Cma01g01364 | 270 | CDD | GST_C_family | 140 | 228 | - | - | |
Cma01g01364 | 270 | SUPERFAMILY | GST C-terminal domain-like | 137 | 245 | IPR036282 | - | |
Cma01g01364 | 270 | PANTHER | GLUTATHIONE S-TRANSFERASE TCHQD | 1 | 270 | IPR044617 | GO:0004364 | |
Cma01g01364 | 270 | Pfam | Glutathione S-transferase, C-terminal domain | 161 | 227 | - | - | |
Cma01g01364 | 270 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 1 | 80 | IPR004045 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma01g01364 | Cma09g00767 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma01g01364 | Cma-Chr1:9715391 | Cma08g00410 | Cma-Chr8:2346863 | 3.90E-10 | dispersed | |
Cma01g01364 | Cma-Chr1:9715391 | Cma09g00767 | Cma-Chr9:3702010 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma01g01364 | K22077 | - | csv:101222476 | 494.967 |