Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma01g01364 ATGCAGTTATATCATCATCCATACTCTTTGAACAGCCAGAAGGTGAGACTTGCCCTGGAAGAGCAAGGCATCGACTACACGTCGTATCATGTCAATCCTATCATGGCCAAGAACATGGACTCCTCGTTCTTCAAGATGAACCCGAGTGCAAAACTTCCCGTCTTTCAAAATGGTTCCCACGTCATTTTCGACACAATCGAGATAATTCAGTATATAGAGAGAATTGCAGTTGTATCCTCGGGAACCGAGGACGTAATGCCGAGTAACAGAGAAGTTGTTGAGTGGATGCATAAGATACAACAATGGAATCCAAAGTTTTTCACTCTCGCCCACGTGCCTGAGAAGTACCGACTTACCGTGACCAAATTTGTAAGGCGTGTCATTATCAGTCGGATGGCCGAAACTCCTGAAATGGCAGCTGCATACCATCATAAGCTCAGAGAAGCATATGAGACAGAAGACAAACTGAAAAACAAAACTGTTATCAAACAAAGCACAGATCATTTAGTGAGACTTCTCGACGAAATCGAGTCGAAGCTAGGCGAAACTGCATTCCTGGCAGGGGAAGAGTTCACCATGGCTGATGCCGTGCTCATCCCGGTGCTGGCTCGACTCGAGCTGTTGAAGGTGGCGGACGAGTATATAGGAGGCAGCAGCAGCAGACCAAACATTGCAGAATATTGGATGTTGGTGCAGCAGAGGCCAAGCTATAAGAAGGTGATTGGAAAGTATTTCAAGGGATGGAGAAAGCACAAAACACTTATGAAAACATGGTGCTTTCTTCATATCAGAACCTTGCTAAGGAGATATTGA 813 45.26 MQLYHHPYSLNSQKVRLALEEQGIDYTSYHVNPIMAKNMDSSFFKMNPSAKLPVFQNGSHVIFDTIEIIQYIERIAVVSSGTEDVMPSNREVVEWMHKIQQWNPKFFTLAHVPEKYRLTVTKFVRRVIISRMAETPEMAAAYHHKLREAYETEDKLKNKTVIKQSTDHLVRLLDEIESKLGETAFLAGEEFTMADAVLIPVLARLELLKVADEYIGGSSSRPNIAEYWMLVQQRPSYKKVIGKYFKGWRKHKTLMKTWCFLHIRTLLRRY 270
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 9715391 9719290 + CmaCh01G013640.1 Cma01g01364 287057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma01g01364 270 CDD GST_N_family 1 73 - -
Cma01g01364 270 Pfam Glutathione S-transferase, N-terminal domain 3 74 IPR004045 -
Cma01g01364 270 SUPERFAMILY Thioredoxin-like 1 74 IPR036249 -
Cma01g01364 270 SFLD Glutathione Transferase (cytosolic) 1 234 IPR040079 -
Cma01g01364 270 Gene3D - 118 241 - -
Cma01g01364 270 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 118 254 IPR010987 -
Cma01g01364 270 Gene3D Glutaredoxin 1 102 - -
Cma01g01364 270 SFLD Main (cytGST) 1 234 - -
Cma01g01364 270 CDD GST_C_family 140 228 - -
Cma01g01364 270 SUPERFAMILY GST C-terminal domain-like 137 245 IPR036282 -
Cma01g01364 270 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 1 270 IPR044617 GO:0004364
Cma01g01364 270 Pfam Glutathione S-transferase, C-terminal domain 161 227 - -
Cma01g01364 270 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 80 IPR004045 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma01g01364 Cma09g00767 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g01364 Cma-Chr1:9715391 Cma08g00410 Cma-Chr8:2346863 3.90E-10 dispersed
Cma01g01364 Cma-Chr1:9715391 Cma09g00767 Cma-Chr9:3702010 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma01g01364 K22077 - csv:101222476 494.967