Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma01g01471 ATGAACATAGTTAAGGGCGTAGCTGACTTGATTCGGAGGACATCCAGTGGCCATATTGGAGTGTCCGGTACAGGGTCACAAGCTAACAGTCCATATCCTCCGAGTCCAAAAATACGATTCAGTGAAGATGGCGACGAGGCGATTCTGAATGAACTTTGGGTTAGATATGAGAAAGCTGTTGATAAGGGGGAAAGAAGAAGGATGTTTTATGTTTTCTTGAAGCAATTTATTGTTGTATACAAGAACTGGAAACCAATAAATGCTGGCTGGCTCCCAAAGGATGCCTCAACTTCTGTTCAAACCATGAACTCGTCTACTTTGGATCATACTGTTGTTGGCTGCTCCAGTGGACATCCTTCCGAAATCATTTTAAAATTAATCGAAGAGGTCAAGCAATTGACTTCTGTTGTAGTTGAATGGAGGTCAACAGCAGACATACTTGGAGCATCAACTGGATTAAATTTAACTTCAGAAGGGTTTCTGATCTTGGATGCCCTGGCAATAGTTATGCGTTCGATGCACAACTGTAAAATTTTTGGGTACCATAGTGGGATTCAGAAGCTCACAGCATTGATGAAAGGGGCTGTTATCCAACTTAAGACAATAGCAGGCGAACTTTCTGGCGATGAAGGTCTATCGAATATTGTTGTGGAAAATACGAGACTCCTACAACTCGTGTTAATAAATGTGGTGTCGATAGTACACTCCTTTATCGATATAGATTCACTTCTATGTGCGGAGGATCATTCTCTAAGCATGAATATACCATCTTGTGAAGAGAGATTAATGTGGCGTCAGAAGGCGGTTGTGTCAGTGATGGAAGCTGGTGGAATTAATTGGTTAGTAGAGTTGTTACGCGTTACTAGAAGGCTGAATATCAAAGAACAAAATATCGACGTGGAGCTCCAATGTTTGGCTATAAAAATTCTCTATTCTGCATTATCCGAGAACCCACGGGGTCAAAATCATTTTAAAAGCATTGGTGGACTTGAAGTCTTGTTAGATGGCCTTGGACTTCCATCCAAAATCGTTTTAGCTCCGAAGGACCTGGCTGGTGCTGACCAGAAAAGAGACGAGAGCAGCTTTCTTAACATTTTGCAGCTGCATGTTCTTTCACTGGCAGTCCTTAGAGAGGCCGTCTTTGGGAATTTAAACAACATGCAATTTTTGTGTGAAAATGGGAGAATCCATAAATTTGCAAATAGCTTCTGTTCTCCAGCGTTCACGCTTCAAGAAGAATTCAAACTGCAGATTGGGGAGTTATCTGGACAGCAAGATTTTAGATGGCCTAGTCTTGACTGTAAATATAATGTTGCAGCACAATCAGGAGAATGTTCTGTTTTACCTTTAGCCAATCTTACTCATATTCAATCTTGGAATGAATATGTTGTGAAGTTATGCAGAGTACTTTGTTCTTTTCTTCTTGCTCCAGATGATGTTAAACCTCATCATCCTCAAGCATCTTCTATTCGAATCATGACACCGGTTTCATTGGTCTACGGTGATCTTTCAATCAAATGGGTCATGAGGGTACTTGTAGCCGTGTTCCCCTGCATTAAGGCTTGCTCTAATCAAAACGATTTGCCTGCCCACTTGAGGATCCTTGCCAATGCTTTGCAACACTCCGTCCTTGCTGCATTTAGAAAGTTCCTTGTTTCTTCTCCGGTGTCTCTTGAAATTTTTCGAGAAGAGGGGATATGGGATCTTTTCTTCTCTGAGAACTTTTTCTATTTTGGACCTGCTTTTGAGGAGTTTACCCTAGAATCTTGGACAAATAATGATGATTTCTTGGAGAAACCTGAAACATATTATGCTACTAGCTCAAACTGTCCACCAAAGGTTGACGGGGTCGATATGATTCAAATTGAAGTCATTTCATTTGTAGAGTTCGCTGCAACTTCTTGTGGAAGTGCACATAATTTACCTGAATTATCCGCTTTGTTAGACACCCTCGAACAGTCTGCTTGTAATTCTGAGGTTGCCGTTGCTCTCTCTAAGAGCCTCCTCCGCATATTACAAATTTCACCTGAGAGAACTGTTGCTTCATTCAAGACATTGAATGCCATTCCTCGGTTGCTTAAAGTTGCGTGTGTTCAAGCCCAGGAACATAGAAGATCTGGAAATGCTATTTCATCTGATATTAATTTTGTTGAAGGTATTCAACCTCGAAGTAATCAGGGACACGATTCACGTGAGACAGCTCAAAGTTGTCTCACATGCTTGGAAACCATCATGGAACTTTTCACAGAATTTTCCTCAAAAGGAGATGATGCGCAAAAGTTGGTTCTGCTTAATCCAACATCAATTGACTGTCTGTTTGAATTATTTTGGGAAGAAAGTTTGAGAAGCCGTGTACTTAAACACACACTTGTGCTCATAAAGATAAAAGCAATTTCCGAGGAAGATCATAAGGCAAAACTGTATATTTGTACTAAATATCTTGAAACGTTTGCTCAAATTAAAGAGCGGGAGAAAAGTTCAACAGAACTCTCTATTGATCTATTGGTTGGAATCAGGGAGATGGTTCTGAATGATCCTCAGTACTACCAAGCTCTGTTTCGTGATGGAGAGTGTTTTTTGCATATCGTCTCTTTGTTGAACGGTAATGTCGACAAGGAAATTGGAGAGAAGTTGGTTTTGAACGTCCTTCAAACTCTTACTTGTCTGCTTGCTAAAAATGAAGTCTCAAAGGCTTCATTTAGAGCTTTGGCTGGCAAAGGTTACCAGACAATGCAAACTTTGCTCTTGGACTTCTGTCAATGCCATCCAAGTGGTGCACTCTTAGGTGTTCTACTCGATATGCTTGTTGATGGAACTTTTGACTTAAAGTTGTGCCCTATTATACAGAACGAAGATGTGATCATTCTTTATCTGAGTGTTCTGCAGAAGAGCAGTGAGCCATTGCAGCATCAAGGGCTTAATATATTCCAACAGCTTCTTCGGGATTCTATATCCAATCGAGCTTCTTGTGTGAGAGCAGGAATGCTGAATTTTCTTCTGGATTGGTTTGGTCAAGATAACAATGATGGCATCATTGTGAAAATTGCTCAGTTAGTTCAAGTAATAGGTGGTCATAGTGTGTCTGGGAAGGATATCCGCAAAATCTTTGCTTTGTTAAGGAGTGAGAAAGTTGGGAGACAGAAACGATATTGCTCGTTGTTGATGGCCAGTATTTTATCGATGCTATCTGAGAAGGGACCAACCGCTTTTTTTGATATGAGCGGGAACAACTCTGGGATCTTAATTAAAACACCTGTTCAGTGGCCTCTCAATAAAGGCTTTTCCTTTTCATGTTGGCTTCGGGTAGAGAACTTCCCACAACATGGAACAATGGGTCTTTTCAGCTTCCTTACAGAAAATGGAAGAGGCTGCTCGGCGGTGCTTGCAAAGGACAAGTTTATTTACGAGTCTATCAATCTGAAGAGACAGAGCGTCCGGTTACATGTTAATATAGTCAGAAAGAAGTGGCATTTTCTTTGTATAACCCATAGTATTGGAAGAGCATTCTCTGGTGGTAGCTTATTGAGGTGTTATGTGGATGGTGATCTTATTTCTTCTGAGAGATGCAGATACGCTAAAGTTAACGAACCACTAACAAATTGCACGGTTGGAGCAAAATTCAGTGCGTCTTTGAGTGAAGAAGTCGACACTAAGGAATCTGTTGAAGCTGCATTTCCGTTTCTTGGTCAGATAGGTCCTGTTTATTTATTTAGTGATGCTATTTCTTCTGAGCAAGTGCAGGGTATTCATTCGCTTGGACCAAGCTATATGTATTCATTTCTTGACAATGACATTGCTACTTTCTCTGAAAATCCATTGCCTAGAGGAATTCTTTATGCTAAAGAGAGTTTGGCATCGAAAATGATCTTCGGCCTTAACGCACAGGCAAGCAGTGGAAAATCATTATTTAATGTTGCTCTAACATTAGATCAAATTTCGGAAAAGAATTATTTTGAAGCTATTGCTATGGTTGGCACAGAATTATGTTCAAGACGCTTACTACAGCGGATTCTCTACTGTGTTGGAGGCGTCACTGTACTTTTTCCTCTAATTTCTCAGTCTGACAGATACGAAAGTGAAAATAATGGTCAGTTTTGTCAGAATGTAAATATAGCTGGTACAAAGGAGTGTCTAACAGCTGAAGTTATTGAACTTATTGCTTGCGTCCTTGACGAGAACTTACCGAGTCAACATCAGATGCATCTCCTTTCTGGTTTCTCCATTCTGGGATTTTTGCTGCAATCGGTTAATCCGCAGCAGCTTAATATGGAAACTCTTGCAGCTTTAAAACATCTTTTCAACGTCATTGCAAACTGTGGCTTTTCTGAGCTGCTCATTCAAGATGCTTTGTCTAGCATATTTCTTAATCTCTCAATCTGGATCTACTCGCCTTATGAGGTGCAGCGTGAATTATACTTGTTTCTCATTCAGCAGTTCGATAACGAGCCCAGGCTACTCAAGAATCTTTGCCGCCTCCCACTTATTCTCAATATGATTCGTAAGTTTTACTGTGACAAAGCTAAATTAAAACTTGCTTCTGGAAGCAAGACTTCTCTGCATCCACCTGGTGGAGTTCTTGGGCCTACTAGGGATGAAATACGGAAAATTCGTCTTCTTTTACTAAGCCTTGGGGAAATGAGCATTCGGCAAAATATTGTAGCAATTGATATAAAAGCTCTTATTGCTTTTTTCGAAAGAAGTCAGGATGTGACGTGCATCGAGGATGTTTTGCATATGGTAATTCGAGCTATATCTCAAAAGACAGTTCTTGCTTCTTTCCACGAGCAAGTTAGTTTCATTGGTGGTTGTCCCGTTTTTATCAATCTTCTTCAGAGGGAATTCGAACCTATCAGATTGCTTAGTTTGCAGTTCCTTGGTAGACTTTTGGTTGATCTTCCTTCTGAGAAGAAAGGATTAAGATTTTTCAATCTCCCAAGTGGAAAACCTAAACCAATTTCTGATAGCCATAAGAAAACTAGTTCAAGGATGCAACCGCTATTCTCAGCTATTTCTGATAGGTTGTTTCGGTTCCCACCGACAGACAATTTATGTGCTGCATTGTTCGATGTTCTTCTAGGCGGTGCAAGTCCCAAACAGGTATTGCAGAAACAAAATCAGTCTGATGTACAAAAGAACAAATCTCTTGGATCTCATTTTGCTGTTCCACAGAGTTTAGTTCTTATTTTCAAGTTCCTATGTAGCTGTGAGGAAATCTCTTCAAGACTAAAAATAATCACAGATCTTCTTGATCTTCTCGACACATATCCTTCAAATATTGAAGCGTTTATGGAATATGGGTGGAATGCTTTGTTGACAGCCTCTGTAAAGCTTGATGCTTTGCAGCAATACAGAGTTGAGTCCGTCGGTCGAGTTGACAATAAAATAAATGAGCAGAGCAGTATAAGGAAACTATTTTGTGTTGTTCTTTTGCATTACATATCGTCCGTGAAGGGTGGCTGGCAACAATTAGAAGAAACAACAACCTTCTTAATTATGCAGTCTGAGAAAGGCCAAGTCTCCTTTAAATACTTTCTTCGTGATATGTACGAGGATCTGATTCAAATGTTAGTGGATTTATCTTCTGGGGAGAATATATTTGTTACACAACCGTGTCGAGATAATACACTATACCTTTTAAGGCTTGTTGATGACATGCTTATAGATGAACTCGACCATCAGTTACCGATTCTAGCGAATGTCTTTGATGTCTCTCCCGAATCCATGGAACTGGAGCTTCACATCTCTGCCTTACATGATGTTTTGCAAGGAGAATCTGATGACCAGACAGCAAGATATGCACAACATCAAATGGACGTTAAAGAGGACAAGATGGATGAAAAATGGTGGCGTCTTTACGATAAATTGTGGATTATTATTAGTGAGATAAATGGCAAGGGACCGAACAAATCTTTGCCGAAATCATCAGCTGGAGGTCCTACATTTGGTCAAAGGGCCCGTGGTTTAGTAGAGTCACTCAACCTTCCTGCTGCAGAGATGGCTGCAGTTGTTGTATCAGGAGGCATAGGCAGTGCATTGGGAGGAAAACCAAACAAAATTGTCGATAAGGCCATGCTTTTGCGCTCGGAGAAGTTCCCAAGAATTATTTTTCGACTTGTCATGCTTTACATTTGCAAGGCTCCTCTAGAAAAAGCGTCGCGATGTGTGCAGCAGATTATTTCACTTTTACCTTCTCTTGTGGTTACTGATGATGAGCAAAACAAAAATAGGTTGCTGCTGTTCATCTGGTCTTTGCTTGCTGTTAGGTCACAGTACAGAACGTTAAATACCGATGCTCGCATTCATGTCATATCGCATTTGATTCGAGAAACTGTAAGCTGTTGCAAATCAATACTTGCCAACAGTATGATAAGCACAGACGATTCTTCGGATAATGGTGCTTTTCTTAAAGAAGCTGGGTACATTCACAACCTGATACAAATAGAACGAGTTACTGCAGCTATAGCTGATGAAGTAAACTATATGAAGTCGTCGAAAATTGACCATCAGAAGCAGTTGCATGAACTAAGACTTAGAATGGAAGAAAGCTTATCTAACGAGTCGATCAACCAGAAGGTTTTTGAAGAGGAGATGCAAAGTAGTCTGACTTCCATTTTGATTGCAGACGACAATAGAAAGGCTGCATTCCAGCTTGCTTATGAGGAAGTGCAGCAAAATATCGCAGAAAAGTGGATGCACATGTTTCGTGCTTTGATTGATGAGCGAGGCCCGTGGTCTGCTAATTCTTCTCCAAATATATCTTCAACACATTGGAAGCTCGACAAGACGGAAGATATGTGGCGACGAAGACCCAAACTAAGAAAGAATTATCACTTTGATGAAAAGTTGTGTCATCCCCCATCAATTTCTCCTAACGACGACATTAATAATGCTGAAAATGTAAAAAAATCTAGTATTGTCGGGCACATGCCGGAGCAAATGAAAAGATTTTTGCTGAAAGGTGCTATGAAGATAACTGATGAAGGAAACTCAGAGCCCATTGAGAATGATGTTGAACCATGTGAACCAAATGCTTCTAATCTCAAGGATTCTTCGGATGGTCAGTACCTAGAGCAAGTCAAAGATGTCGGTGAATGGAAAGATATTGTACAGGACAGAAAAGATACTTTATTTTCTCCGGTGACAGAAGAAAGCGAGGTTCTCACGTCAACTCCATGTGTACTTGTGACATCCAAAAGAAAATTAGCTGGATATTTGGCTGTAATGAAAAATGCTTTGCATTTCTTTGGGGAGTTTTTGGTCGAAGGTACTGGGGGAGCATCCACCTTTAAGAACTTCGAAGCTCTTAAAAGTTCGGATTTGACTAAGCTCGATCAAAAGCCGAAGTCCCTAAAGTGGCCTCTATATTTACAATTGGATTCCACAAAGGGTACAGTAGTTGATGATGTGGAAGTGATGAACGACGATGGCAATTTAAAACGACCGCTAAAAAATTTCAGACGTCATAGGAGATGGAACATTGGAAAGATAAAAGGAGTTCACTGGACTCGATATTTGCTTAGATACACTGCGATAGAGATCTTCTTCAGCGATTCCGTTCCACCAGTCTTTTTAAATTTCGACTCACCAAAAGGTGCCAAAGATATTGGGACTCTGATCGTGTCTAGTAGAAATGACTATTTGTTTCCTAAAGGCAGTAGTCGAAATCAAAGTGGAGTTATTTCTTTCGTTGATAGACGTGTTGCCCTCGAGATGGCAGAAACTGCTCGAGAGAGTTGGAAGAGGAGGGATATTACAAACTTCGAGTATCTAATGATTCTCAATACCCTTTCTGGAAGATCTTATAACGATTTAACTCAGTATCCAGTGTTTCCCTGGGTTCTGGCGGATTACTCCTCCGAGGTTCTTGATTTTAATAAGTCATCAACTTTTCGTGATCTTTCGAAGCCTGTTGGAGCATTAAATCCGAAACGTTTTGAGGTATTTGAAGATAGATATCGTAACTTTTGTGATCCCGACATACCAAGTTTTTATTATGGATCTCATTACTCAAGCATGGGAATTGTTCTCTACTATCTTTTACGCTTGGAGCCATTTACTTCTCTTCACCGGAATTTGCAAGGGGGTAAATTTGATCACGCAGATCGACTTTTTCAAAGCATCGAGGCGACATATAGAAATTGCTTGTCCAATACAAGTGATGTGAAGGAGTTGATACCTGAGTTCTTTTACATGCCAGAGTTTCTCTGCAATTCAAATCATTATCACTTGGGGGTTAAACAAGATGGTGAACCCTTAGGTGATGTAGTCCTCCCTCCTTGGGCCAAGGGCTCACCTGAAGTATTTATAAGTAAAAACAGGGAAGCACTTGAAAGTGAGTATGTTAGTTCAAATCTACATCACTGGATAGATCTGGTTTTTGGTTATAAGCAGCGCGGAAAACCAGCCGTGGAGGCTGCAAATGTCTTTTATTATCTGACTTATGAAGGTGCTGCTGATCTTGGCACTATGGAAGACGATTTTCAACGATCAGCGATTGAAGATCAAATTGCCAACTTTGGCCAAACGCCAATCCAGATCTTTCGTAAAAAACATCCAAGAAGAGGGCCACCAATACCTATAGCACACCCGTTACATTTTGCTCCGGGTTCCATTAATTTAACGTCCATTATTTCATGTTCCACTCATCGTCCCTCGGCCATATTACACATTAGTATGTTAGACACGCATATTGTCCTTGTGAGCCAGGGGCTAGTTCTGACTGTTAAGATGTGGTTGACCACTCAGTTACAGTATGGTGGAAATTTTACGTTCTCTGGGTCTCAGGAACCTTTTTTTGGAGTGGGTTCGGATATTCTTTCTCCTCGTAAAATCGGGAGCCCTCTAGCTGAAAATTTTGAACTTGGAGGACAATGCTTCGCTACCATGCCAACACCCGCCGAGAACTTTCTGGTTTCTTGTGGGAATTGGGATAATAGTTTTCATATTATTTCCCTGACTGATGGCAGGTTGTTACAGAGCATCCGACAGCATAGTGATGTGGTTAGCTGTGCAGCAGTGACATCGGATGGAAGCATTCTTGCTACGGGAAGTTACGACACTACAGTTATGGTGTGGAATGTTCTTCGTGGTAGGTTCTCCGAAAAAAAAGCACGCAACACACAATCCGAGCCACCTCGAAAAGACAATGTCATTGCAGAGACTCCATTCCATGTTCTCTGTGGGCATGACGACATAATTACGTGCTTATATGTTAGTGTGGAGCTAGACATAGTTATCAGTGGTTCAAAAGACGGGACTTGCATTTTTCATACTCTTCGTGAGGGACGATACATAAGATCTTTGCATCATCCATCTGGTTGTGGATTGTCAAAGCTCGTGGCTTCTCGGCATGGCAGAGTCGTGTTTTATGCTGATGATGATCTTAGTTTGCATCTCTATTCAATAAATGGTAAACATTTGGCTGCTTCGGAATCCAATGGCCGCCTCAACTGTGTCCAACTCAGCCAATGTGGCGAGTTTTTGGTTTGTGCTGGTGATCATGGCCAGATAGTTGTCCGCTCCATGAACTCGCTCGAGGTTATAAGTAGGTACAATGGAATTGGAAAAGTAATCGTGTCTCTAACTGTTACCACCGAAGAATGCTTCCTTGCTGGAACAAAAGATGGAAGTCTTCTTGTATATTCGATCGAGAATCCTCAGCTACGAAAAGCTAGCCCGTCTCGAAATACCAAAACTAAACCTTCTGCTGTGTGA 9714 40.86 MNIVKGVADLIRRTSSGHIGVSGTGSQANSPYPPSPKIRFSEDGDEAILNELWVRYEKAVDKGERRRMFYVFLKQFIVVYKNWKPINAGWLPKDASTSVQTMNSSTLDHTVVGCSSGHPSEIILKLIEEVKQLTSVVVEWRSTADILGASTGLNLTSEGFLILDALAIVMRSMHNCKIFGYHSGIQKLTALMKGAVIQLKTIAGELSGDEGLSNIVVENTRLLQLVLINVVSIVHSFIDIDSLLCAEDHSLSMNIPSCEERLMWRQKAVVSVMEAGGINWLVELLRVTRRLNIKEQNIDVELQCLAIKILYSALSENPRGQNHFKSIGGLEVLLDGLGLPSKIVLAPKDLAGADQKRDESSFLNILQLHVLSLAVLREAVFGNLNNMQFLCENGRIHKFANSFCSPAFTLQEEFKLQIGELSGQQDFRWPSLDCKYNVAAQSGECSVLPLANLTHIQSWNEYVVKLCRVLCSFLLAPDDVKPHHPQASSIRIMTPVSLVYGDLSIKWVMRVLVAVFPCIKACSNQNDLPAHLRILANALQHSVLAAFRKFLVSSPVSLEIFREEGIWDLFFSENFFYFGPAFEEFTLESWTNNDDFLEKPETYYATSSNCPPKVDGVDMIQIEVISFVEFAATSCGSAHNLPELSALLDTLEQSACNSEVAVALSKSLLRILQISPERTVASFKTLNAIPRLLKVACVQAQEHRRSGNAISSDINFVEGIQPRSNQGHDSRETAQSCLTCLETIMELFTEFSSKGDDAQKLVLLNPTSIDCLFELFWEESLRSRVLKHTLVLIKIKAISEEDHKAKLYICTKYLETFAQIKEREKSSTELSIDLLVGIREMVLNDPQYYQALFRDGECFLHIVSLLNGNVDKEIGEKLVLNVLQTLTCLLAKNEVSKASFRALAGKGYQTMQTLLLDFCQCHPSGALLGVLLDMLVDGTFDLKLCPIIQNEDVIILYLSVLQKSSEPLQHQGLNIFQQLLRDSISNRASCVRAGMLNFLLDWFGQDNNDGIIVKIAQLVQVIGGHSVSGKDIRKIFALLRSEKVGRQKRYCSLLMASILSMLSEKGPTAFFDMSGNNSGILIKTPVQWPLNKGFSFSCWLRVENFPQHGTMGLFSFLTENGRGCSAVLAKDKFIYESINLKRQSVRLHVNIVRKKWHFLCITHSIGRAFSGGSLLRCYVDGDLISSERCRYAKVNEPLTNCTVGAKFSASLSEEVDTKESVEAAFPFLGQIGPVYLFSDAISSEQVQGIHSLGPSYMYSFLDNDIATFSENPLPRGILYAKESLASKMIFGLNAQASSGKSLFNVALTLDQISEKNYFEAIAMVGTELCSRRLLQRILYCVGGVTVLFPLISQSDRYESENNGQFCQNVNIAGTKECLTAEVIELIACVLDENLPSQHQMHLLSGFSILGFLLQSVNPQQLNMETLAALKHLFNVIANCGFSELLIQDALSSIFLNLSIWIYSPYEVQRELYLFLIQQFDNEPRLLKNLCRLPLILNMIRKFYCDKAKLKLASGSKTSLHPPGGVLGPTRDEIRKIRLLLLSLGEMSIRQNIVAIDIKALIAFFERSQDVTCIEDVLHMVIRAISQKTVLASFHEQVSFIGGCPVFINLLQREFEPIRLLSLQFLGRLLVDLPSEKKGLRFFNLPSGKPKPISDSHKKTSSRMQPLFSAISDRLFRFPPTDNLCAALFDVLLGGASPKQVLQKQNQSDVQKNKSLGSHFAVPQSLVLIFKFLCSCEEISSRLKIITDLLDLLDTYPSNIEAFMEYGWNALLTASVKLDALQQYRVESVGRVDNKINEQSSIRKLFCVVLLHYISSVKGGWQQLEETTTFLIMQSEKGQVSFKYFLRDMYEDLIQMLVDLSSGENIFVTQPCRDNTLYLLRLVDDMLIDELDHQLPILANVFDVSPESMELELHISALHDVLQGESDDQTARYAQHQMDVKEDKMDEKWWRLYDKLWIIISEINGKGPNKSLPKSSAGGPTFGQRARGLVESLNLPAAEMAAVVVSGGIGSALGGKPNKIVDKAMLLRSEKFPRIIFRLVMLYICKAPLEKASRCVQQIISLLPSLVVTDDEQNKNRLLLFIWSLLAVRSQYRTLNTDARIHVISHLIRETVSCCKSILANSMISTDDSSDNGAFLKEAGYIHNLIQIERVTAAIADEVNYMKSSKIDHQKQLHELRLRMEESLSNESINQKVFEEEMQSSLTSILIADDNRKAAFQLAYEEVQQNIAEKWMHMFRALIDERGPWSANSSPNISSTHWKLDKTEDMWRRRPKLRKNYHFDEKLCHPPSISPNDDINNAENVKKSSIVGHMPEQMKRFLLKGAMKITDEGNSEPIENDVEPCEPNASNLKDSSDGQYLEQVKDVGEWKDIVQDRKDTLFSPVTEESEVLTSTPCVLVTSKRKLAGYLAVMKNALHFFGEFLVEGTGGASTFKNFEALKSSDLTKLDQKPKSLKWPLYLQLDSTKGTVVDDVEVMNDDGNLKRPLKNFRRHRRWNIGKIKGVHWTRYLLRYTAIEIFFSDSVPPVFLNFDSPKGAKDIGTLIVSSRNDYLFPKGSSRNQSGVISFVDRRVALEMAETARESWKRRDITNFEYLMILNTLSGRSYNDLTQYPVFPWVLADYSSEVLDFNKSSTFRDLSKPVGALNPKRFEVFEDRYRNFCDPDIPSFYYGSHYSSMGIVLYYLLRLEPFTSLHRNLQGGKFDHADRLFQSIEATYRNCLSNTSDVKELIPEFFYMPEFLCNSNHYHLGVKQDGEPLGDVVLPPWAKGSPEVFISKNREALESEYVSSNLHHWIDLVFGYKQRGKPAVEAANVFYYLTYEGAADLGTMEDDFQRSAIEDQIANFGQTPIQIFRKKHPRRGPPIPIAHPLHFAPGSINLTSIISCSTHRPSAILHISMLDTHIVLVSQGLVLTVKMWLTTQLQYGGNFTFSGSQEPFFGVGSDILSPRKIGSPLAENFELGGQCFATMPTPAENFLVSCGNWDNSFHIISLTDGRLLQSIRQHSDVVSCAAVTSDGSILATGSYDTTVMVWNVLRGRFSEKKARNTQSEPPRKDNVIAETPFHVLCGHDDIITCLYVSVELDIVISGSKDGTCIFHTLREGRYIRSLHHPSGCGLSKLVASRHGRVVFYADDDLSLHLYSINGKHLAASESNGRLNCVQLSQCGEFLVCAGDHGQIVVRSMNSLEVISRYNGIGKVIVSLTVTTEECFLAGTKDGSLLVYSIENPQLRKASPSRNTKTKPSAV 3237
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 10351894 10375941 - CmaCh01G014710.1 Cma01g01471 287164

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cma01g01471 3237 Pfam Beige/BEACH domain 2578 2854 IPR000409 -
Cma01g01471 3237 PANTHER BEIGE/BEACH-RELATED 51 3228 - -
Cma01g01471 3237 SMART WD40_4 3177 3215 IPR001680 GO:0005515
Cma01g01471 3237 SMART WD40_4 3094 3134 IPR001680 GO:0005515
Cma01g01471 3237 SMART WD40_4 2987 3026 IPR001680 GO:0005515
Cma01g01471 3237 SMART WD40_4 3136 3174 IPR001680 GO:0005515
Cma01g01471 3237 SMART WD40_4 3052 3091 IPR001680 GO:0005515
Cma01g01471 3237 Gene3D BEACH domain 2568 2854 IPR036372 -
Cma01g01471 3237 ProSitePatterns Trp-Asp (WD) repeats signature. 3013 3027 IPR019775 -
Cma01g01471 3237 PANTHER OS06G0678651 PROTEIN 51 3228 - -
Cma01g01471 3237 SUPERFAMILY ARM repeat 644 1025 IPR016024 -
Cma01g01471 3237 Gene3D - 1064 1261 - -
Cma01g01471 3237 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 2994 3027 - -
Cma01g01471 3237 ProSiteProfiles BEACH domain profile. 2564 2854 IPR000409 -
Cma01g01471 3237 SUPERFAMILY PH domain-like 2385 2540 - -
Cma01g01471 3237 Gene3D - 2957 3235 IPR015943 GO:0005515
Cma01g01471 3237 Pfam Neurobeachin alpha solenoid region 640 1062 IPR046852 -
Cma01g01471 3237 Pfam Domain of unknown function (DUF4800) 2188 2280 - -
Cma01g01471 3237 Gene3D - 2384 2537 IPR011993 -
Cma01g01471 3237 Pfam PH domain associated with Beige/BEACH 2483 2536 IPR023362 -
Cma01g01471 3237 ProSiteProfiles Trp-Asp (WD) repeats profile. 2994 3035 IPR001680 GO:0005515
Cma01g01471 3237 ProSiteProfiles BEACH-type PH domain profile. 2381 2540 IPR023362 -
Cma01g01471 3237 SUPERFAMILY BEACH domain 2568 2854 IPR036372 -
Cma01g01471 3237 SUPERFAMILY WD40 repeat-like 2959 3226 IPR036322 GO:0005515
Cma01g01471 3237 Pfam Neurobeachin/BDCP, DUF4704 alpha solenoid region 1315 1831 IPR031570 -
Cma01g01471 3237 Pfam Concanavalin A-like lectin/glucanases superfamily 1075 1247 - -
Cma01g01471 3237 CDD Beach 2579 2854 IPR000409 -
Cma01g01471 3237 Pfam Neurobeachin beta propeller domain 2875 3224 IPR046851 -
Cma01g01471 3237 SMART Beach_2 2576 2854 IPR000409 -
Cma01g01471 3237 SUPERFAMILY Concanavalin A-like lectins/glucanases 1066 1254 IPR013320 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma01g01471 - - - csv:101204034 5628.91
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g01471 Cma-Chr1:10351894 Cma14g01993 Cma-Chr14:13981258 1.59E-26 dispersed
Cma01g01471 Cma-Chr1:10351894 Cma17g01207 Cma-Chr17:8328996 1.85E-113 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g530 . Blo12g00736 . Bda03g00451 . Bpe04g00414 . . . . Cma01g01471 . . . . . . . . . . . . . . . . . . . . Cone4ag1289 . . . Lsi04g02285 Csa03g04501 Chy04g00200 . . . . . . . . . . Cmo01g01527 . . . . . . Cpe02g00481 Bhi09g02508 . . . Hepe01g2176 Mch11g0715 . Cla11g01433 Cam11g1487 Cec11g1521 Cco11g1517 Clacu11g1649 Cmu11g1467 Cre11g1885 . . . Cme04g00231
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003187 1 6 2 1 1 0 2 0 2 1 2 1 1 1 1 1 2 1 2 2 1 1 1 1 3 1 1 2 2 1 44
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cma01g01471 Cma_Chr01 FPKM 9.212543 10.483847 7.829219 8.16203 6.054606 5.803586 7.710958 8.4445 6.522457 7.009292