Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cma01g01490 | ATGTCCTACTCGAATATGGCGGGAGATCTACGCTCTTGGTCACACGCGCTCGTCAGAATCTCTCCCTACACCTTCTCCGCCGTCGGCATTGCCATAGCCATCGGCATCTCCGTCCTCGGAGCTGCCTGGGGGATCTACATAACCGGAAGCAGTTTGATCGGTGCTGCAATTAAAGCTCCGCGTATTACCTCGAAGAATCTAATTAGCGTAATTTTCTGTGAAGCCGTGGCCATATATGGTGTCATTGTGGCCATCATCCTACAGACAAAACTGGAGAGTGTTCCAGCATCTAAAATATATGCTCCAGAGTCTCTAAGAGCAGGATATTCAATTTTTGCCTCTGGAATTATTGTGGGCTTCGCCAACCTGGTTTGCGGGTTATGCGTAGGGGTTATTGGAAGCAGTTGTGCATTGTCTGATGCCCAAAACTCATCCCTTTTTGTAAAGATTCTTGTGATCGAGATCTTTGGAAGCGCACTCGGGTTATTTGGTGTAATTGTAGGAATAATAATGTCTGCTCAAGCTACATGGCCTGCAAAGGCAGTTTAA | 549 | 46.99 | MSYSNMAGDLRSWSHALVRISPYTFSAVGIAIAIGISVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPASKIYAPESLRAGYSIFASGIIVGFANLVCGLCVGVIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAKAV | 182 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 10471836 | 10473944 | + | CmaCh01G014900.1 | Cma01g01490 | 287183 |
Annotation
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cma01g01490 | 182 | Gene3D | - | 23 | 178 | IPR035921 | - | |
| Cma01g01490 | 182 | CDD | ATP-synt_Vo_c_ATP6F_rpt1 | 25 | 87 | - | - | |
| Cma01g01490 | 182 | Pfam | ATP synthase subunit C | 112 | 171 | IPR002379 | GO:0015078|GO:0033177|GO:1902600 | |
| Cma01g01490 | 182 | Pfam | ATP synthase subunit C | 29 | 87 | IPR002379 | GO:0015078|GO:0033177|GO:1902600 | |
| Cma01g01490 | 182 | PANTHER | V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT | 7 | 179 | - | - | |
| Cma01g01490 | 182 | SUPERFAMILY | F1F0 ATP synthase subunit C | 104 | 172 | IPR035921 | - | |
| Cma01g01490 | 182 | PANTHER | V-TYPE PROTON ATPASE 21 KDA PROTEOLIPID SUBUNIT | 7 | 179 | - | - | |
| Cma01g01490 | 182 | SUPERFAMILY | F1F0 ATP synthase subunit C | 21 | 90 | IPR035921 | - | |
| Cma01g01490 | 182 | CDD | ATP-synt_Vo_c_ATP6F_rpt2 | 107 | 171 | - | - | |
| Cma01g01490 | 182 | PRINTS | Vacuolar ATP synthase 16kDa subunit signature | 41 | 65 | IPR000245 | GO:0033179|GO:0046961|GO:1902600 | |
| Cma01g01490 | 182 | PRINTS | Vacuolar ATP synthase 16kDa subunit signature | 67 | 91 | IPR000245 | GO:0033179|GO:0046961|GO:1902600 | |
| Cma01g01490 | 182 | PRINTS | Vacuolar ATP synthase 16kDa subunit signature | 123 | 149 | IPR000245 | GO:0033179|GO:0046961|GO:1902600 | |
| Cma01g01490 | 182 | PRINTS | Vacuolar ATP synthase 16kDa subunit signature | 150 | 173 | IPR000245 | GO:0033179|GO:0046961|GO:1902600 |
Pathway
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cma01g01490 | K03661 | ATPeV0B, ATP6F; V-type H+-transporting ATPase 21kDa proteolipid subunit | - | tcc:18588964 | 308.145 |
Dupl-types
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cma01g01490 | Cma-Chr1:10471836 | Cma12g00314 | Cma-Chr12:1614332 | 1.30E-109 | dispersed | |
| Cma01g01490 | Cma-Chr1:10471836 | Cma05g00409 | Cma-Chr5:1802161 | 1.02E-109 | wgd |
Syn-Families
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Cma12g00603 | . | 1 | 1032 | Primary Pumps ATPases(2) | AT1G10130 | 79.6 | 0.0e+00 | 1590.5 | |
| Cma20g00461 | CST | 1 | 814 | Primary Pumps ATPases(2) | AT2G28520 | 80.9 | 0.0e+00 | 1332.0 | |
| Cma02g00864 | CST | 1 | 811 | Primary Pumps ATPases(2) | AT2G28520 | 79.9 | 0.0e+00 | 1310.8 | |
| Cma12g00431 | CST | 1 | 803 | Primary Pumps ATPases(2) | AT2G28520 | 62.7 | 7.5e-295 | 1010.4 | |
| Cma11g01088 | . | 38 | 841 | Primary Pumps ATPases(2) | AT2G28520 | 62.4 | 5.0e-291 | 997.7 | |
| Cma19g00683 | . | 10 | 941 | Primary Pumps ATPases(2) | AT2G28520 | 54.8 | 1.7e-278 | 956.1 | |
| Cma11g01088 | . | 34 | 846 | Primary Pumps ATPases(2) | AT2G21410 | 75.8 | 0.0e+00 | 1229.9 | |
| Cma12g00431 | CST | 1 | 808 | Primary Pumps ATPases(2) | AT2G21410 | 73.0 | 0.0e+00 | 1194.5 | |
| Cma19g00683 | . | 6 | 946 | Primary Pumps ATPases(2) | AT2G21410 | 66.1 | 0.0e+00 | 1189.9 | |
| Cma20g00461 | CST | 9 | 818 | Primary Pumps ATPases(2) | AT2G21410 | 62.1 | 4.3e-298 | 1021.1 | |
| Cma02g00864 | CST | 9 | 816 | Primary Pumps ATPases(2) | AT2G21410 | 62.6 | 4.7e-297 | 1017.7 | |
| Cma11g01088 | . | 36 | 846 | Primary Pumps ATPases(2) | AT4G39080 | 76.3 | 0.0e+00 | 1225.3 | |
| Cma19g00683 | . | 8 | 946 | Primary Pumps ATPases(2) | AT4G39080 | 66.7 | 0.0e+00 | 1189.5 | |
| Cma12g00431 | CST | 1 | 808 | Primary Pumps ATPases(2) | AT4G39080 | 73.3 | 0.0e+00 | 1182.2 | |
| Cma20g00461 | CST | 9 | 818 | Primary Pumps ATPases(2) | AT4G39080 | 63.4 | 7.3e-298 | 1020.4 | |
| Cma02g00864 | CST | 9 | 816 | Primary Pumps ATPases(2) | AT4G39080 | 63.7 | 1.6e-297 | 1019.2 | |
| Cma12g00424 | . | 28 | 165 | Primary Pumps ATPases(2) | AT4G34720 | 99.3 | 1.9e-60 | 229.2 | |
| Cma12g00425 | CST | 27 | 164 | Primary Pumps ATPases(2) | AT4G34720 | 99.3 | 1.9e-60 | 229.2 | |
| Cma01g01395 | . | 28 | 165 | Primary Pumps ATPases(2) | AT4G34720 | 99.3 | 1.9e-60 | 229.2 | |
| Cma05g00288 | CST | 2129 | 2266 | Primary Pumps ATPases(2) | AT4G34720 | 99.3 | 1.9e-60 | 229.2 | |
| Cma05g00287 | CST | 28 | 165 | Primary Pumps ATPases(2) | AT4G34720 | 99.3 | 1.9e-60 | 229.2 | |
| Cma09g00796 | . | 28 | 151 | Primary Pumps ATPases(2) | AT4G34720 | 100.0 | 2.2e-53 | 205.7 | |
| Cma12g00424 | . | 2 | 165 | Primary Pumps ATPases(2) | AT1G75630 | 80.8 | 1.1e-66 | 250.4 | |
| Cma05g00288 | CST | 2103 | 2266 | Primary Pumps ATPases(2) | AT1G75630 | 80.8 | 1.9e-66 | 249.6 | |
| Cma05g00287 | CST | 2 | 165 | Primary Pumps ATPases(2) | AT1G75630 | 80.8 | 1.9e-66 | 249.6 | |
| Cma12g00425 | CST | 2 | 164 | Primary Pumps ATPases(2) | AT1G75630 | 80.7 | 5.5e-66 | 248.1 | |
| Cma01g01395 | . | 5 | 165 | Primary Pumps ATPases(2) | AT1G75630 | 81.0 | 7.2e-66 | 247.7 | |
| Cma09g00796 | . | 2 | 151 | Primary Pumps ATPases(2) | AT1G75630 | 79.3 | 2.9e-59 | 225.7 | |
| Cma12g00425 | CST | 1 | 164 | Primary Pumps ATPases(2) | AT2G16510 | 99.4 | 1.6e-74 | 276.2 | |
| Cma05g00288 | CST | 2104 | 2266 | Primary Pumps ATPases(2) | AT2G16510 | 99.4 | 5.9e-74 | 274.2 | |
| Cma05g00287 | CST | 3 | 165 | Primary Pumps ATPases(2) | AT2G16510 | 99.4 | 5.9e-74 | 274.2 | |
| Cma01g01395 | . | 3 | 165 | Primary Pumps ATPases(2) | AT2G16510 | 98.8 | 1.3e-73 | 273.1 | |
| Cma12g00424 | . | 3 | 165 | Primary Pumps ATPases(2) | AT2G16510 | 98.8 | 2.3e-73 | 272.3 | |
| Cma09g00796 | . | 3 | 151 | Primary Pumps ATPases(2) | AT2G16510 | 99.3 | 2.7e-66 | 248.8 | |
| Cma01g01395 | . | 1 | 122 | Primary Pumps ATPases(2) | AT1G19910 | 98.4 | 1.6e-52 | 202.6 | |
| Cma05g00288 | CST | 2102 | 2223 | Primary Pumps ATPases(2) | AT1G19910 | 98.4 | 1.6e-52 | 202.6 | |
| Cma05g00287 | CST | 1 | 122 | Primary Pumps ATPases(2) | AT1G19910 | 98.4 | 1.6e-52 | 202.6 | |
| Cma09g00796 | . | 1 | 122 | Primary Pumps ATPases(2) | AT1G19910 | 98.4 | 2.8e-52 | 201.8 | |
| Cma12g00424 | . | 1 | 122 | Primary Pumps ATPases(2) | AT1G19910 | 97.5 | 6.2e-52 | 200.7 | |
| Cma12g00425 | CST | 2 | 121 | Primary Pumps ATPases(2) | AT1G19910 | 99.2 | 6.2e-52 | 200.7 | |
| Cma01g01490 | . | 4 | 180 | Primary Pumps ATPases(2) | AT2G25610 | 82.5 | 3.8e-71 | 265.4 | |
| Cma12g00314 | . | 4 | 180 | Primary Pumps ATPases(2) | AT2G25610 | 84.2 | 6.5e-71 | 264.6 | |
| Cma05g00409 | . | 10 | 180 | Primary Pumps ATPases(2) | AT2G25610 | 86.0 | 1.2e-69 | 260.4 | |
| Cma12g00424 | . | 28 | 165 | Primary Pumps ATPases(2) | AT4G38920 | 99.3 | 5.4e-60 | 227.6 | |
| Cma12g00425 | CST | 27 | 164 | Primary Pumps ATPases(2) | AT4G38920 | 99.3 | 5.4e-60 | 227.6 | |
| Cma01g01395 | . | 28 | 165 | Primary Pumps ATPases(2) | AT4G38920 | 99.3 | 5.4e-60 | 227.6 | |
| Cma05g00288 | CST | 2129 | 2266 | Primary Pumps ATPases(2) | AT4G38920 | 99.3 | 5.4e-60 | 227.6 | |
| Cma05g00287 | CST | 28 | 165 | Primary Pumps ATPases(2) | AT4G38920 | 99.3 | 5.4e-60 | 227.6 | |
| Cma09g00796 | . | 28 | 151 | Primary Pumps ATPases(2) | AT4G38920 | 100.0 | 6.4e-53 | 204.1 | |
| Cma01g01490 | . | 8 | 180 | Primary Pumps ATPases(2) | AT4G32530 | 76.8 | 1.5e-74 | 276.6 | |
| Cma12g00314 | . | 1 | 180 | Primary Pumps ATPases(2) | AT4G32530 | 72.9 | 9.3e-72 | 267.3 | |
| Cma05g00409 | . | 1 | 180 | Primary Pumps ATPases(2) | AT4G32530 | 72.9 | 2.7e-71 | 265.8 | |
| Cma13g00147 | CST | 42 | 1106 | Primary Pumps ATPases(2) | AT1G07810 | 80.7 | 0.0e+00 | 1673.3 | |
| Cma01g00579 | CST | 1 | 1065 | Primary Pumps ATPases(2) | AT1G07810 | 80.4 | 0.0e+00 | 1653.3 | |
| Cma13g00147 | CST | 42 | 1106 | Primary Pumps ATPases(2) | AT1G07670 | 80.6 | 0.0e+00 | 1673.7 | |
| Cma01g00579 | CST | 1 | 1065 | Primary Pumps ATPases(2) | AT1G07670 | 80.1 | 0.0e+00 | 1652.9 | |
| Cma12g00603 | . | 1 | 1032 | Primary Pumps ATPases(2) | AT1G10130 | 79.6 | 0.0e+00 | 1590.5 | |
| Cma13g00147 | CST | 63 | 1087 | Primary Pumps ATPases(2) | AT4G00900 | 66.2 | 0.0e+00 | 1333.2 | |
| Cma01g00579 | CST | 22 | 1045 | Primary Pumps ATPases(2) | AT4G00900 | 65.2 | 0.0e+00 | 1305.4 | |
| Cma04g02008 | . | 1 | 126 | Primary Pumps ATPases(2) | AT4G02620 | 84.1 | 2.3e-57 | 218.8 | |
| Cma10g01123 | . | 1 | 126 | Primary Pumps ATPases(2) | AT4G02620 | 84.1 | 2.3e-57 | 218.8 | |
| Cma19g00752 | CST | 41 | 526 | Primary Pumps ATPases(2) | AT1G76030 | 95.9 | 1.6e-268 | 922.2 | |
| Cma11g01365 | CST | 37 | 494 | Primary Pumps ATPases(2) | AT1G76030 | 94.0 | 9.4e-253 | 869.8 | |
| Cma14g00208 | CST | 105 | 212 | Primary Pumps ATPases(2) | AT3G01390 | 78.7 | 5.1e-37 | 151.0 | |
| Cma06g00375 | CST | 292 | 399 | Primary Pumps ATPases(2) | AT3G01390 | 79.6 | 5.1e-37 | 151.0 | |
| Cma15g00782 | . | 1 | 376 | Primary Pumps ATPases(2) | AT1G12840 | 82.7 | 1.3e-180 | 629.8 | |
| Cma04g02250 | . | 1 | 376 | Primary Pumps ATPases(2) | AT1G12840 | 82.7 | 4.8e-180 | 627.9 | |
| Cma11g01948 | . | 591 | 851 | Primary Pumps ATPases(2) | AT3G58730 | 80.8 | 1.3e-115 | 413.3 | |
| Cma02g00580 | . | 67 | 327 | Primary Pumps ATPases(2) | AT3G58730 | 80.1 | 3.8e-115 | 411.8 | |
| Cma07g00813 | . | 3 | 454 | Primary Pumps ATPases(2) | AT3G42050 | 79.2 | 2.4e-207 | 718.8 | |
| Cma14g00502 | . | 3 | 454 | Primary Pumps ATPases(2) | AT3G42050 | 79.6 | 3.0e-205 | 711.8 | |
| Cma12g00425 | CST | 1 | 164 | Primary Pumps ATPases(2) | AT2G16510 | 99.4 | 1.6e-74 | 276.2 | |
| Cma05g00288 | CST | 2104 | 2266 | Primary Pumps ATPases(2) | AT2G16510 | 99.4 | 5.9e-74 | 274.2 | |
| Cma05g00287 | CST | 3 | 165 | Primary Pumps ATPases(2) | AT2G16510 | 99.4 | 5.9e-74 | 274.2 | |
| Cma01g01395 | . | 3 | 165 | Primary Pumps ATPases(2) | AT2G16510 | 98.8 | 1.3e-73 | 273.1 | |
| Cma12g00424 | . | 3 | 165 | Primary Pumps ATPases(2) | AT2G16510 | 98.8 | 2.3e-73 | 272.3 | |
| Cma09g00796 | . | 3 | 151 | Primary Pumps ATPases(2) | AT2G16510 | 99.3 | 2.7e-66 | 248.8 | |
| Cma19g00752 | CST | 37 | 526 | Primary Pumps ATPases(2) | AT4G38510 | 95.3 | 1.5e-269 | 925.6 | |
| Cma11g01365 | CST | 37 | 494 | Primary Pumps ATPases(2) | AT4G38510 | 94.0 | 8.7e-254 | 873.2 | |
| Cma14g00746 | . | 1 | 184 | Primary Pumps ATPases(2) | AT1G64200 | 74.3 | 4.8e-67 | 251.5 | |
| Cma11g01534 | . | 1 | 183 | Primary Pumps ATPases(2) | AT1G64200 | 73.7 | 7.7e-65 | 244.2 | |
| Cma19g00752 | CST | 41 | 526 | Primary Pumps ATPases(2) | AT1G20260 | 95.1 | 2.6e-266 | 914.8 | |
| Cma11g01365 | CST | 37 | 494 | Primary Pumps ATPases(2) | AT1G20260 | 93.4 | 6.8e-251 | 863.6 | |
| Cma20g00461 | CST | 1 | 814 | Primary Pumps ATPases(2) | AT2G28520 | 80.9 | 0.0e+00 | 1332.0 | |
| Cma02g00864 | CST | 1 | 811 | Primary Pumps ATPases(2) | AT2G28520 | 79.9 | 0.0e+00 | 1310.8 | |
| Cma12g00431 | CST | 1 | 803 | Primary Pumps ATPases(2) | AT2G28520 | 62.7 | 7.5e-295 | 1010.4 | |
| Cma11g01088 | . | 38 | 841 | Primary Pumps ATPases(2) | AT2G28520 | 62.4 | 5.0e-291 | 997.7 | |
| Cma19g00683 | . | 10 | 941 | Primary Pumps ATPases(2) | AT2G28520 | 54.8 | 1.7e-278 | 956.1 | |
| Cma11g01035 | . | 1 | 351 | Primary Pumps ATPases(2) | AT3G28715 | 92.0 | 8.6e-192 | 666.8 | |
| Cma11g01534 | . | 1 | 221 | Primary Pumps ATPases(2) | AT4G11150 | 76.6 | 3.3e-86 | 315.5 | |
| Cma14g00746 | . | 1 | 209 | Primary Pumps ATPases(2) | AT4G11150 | 75.2 | 1.6e-80 | 296.6 | |
| Cma17g00631 | . | 1 | 623 | Primary Pumps ATPases(2) | AT1G78900 | 93.9 | 0.0e+00 | 1181.4 | |
| Cma08g00852 | . | 1 | 623 | Primary Pumps ATPases(2) | AT1G78900 | 93.1 | 0.0e+00 | 1171.4 | |
| Cma19g00752 | CST | 41 | 526 | Primary Pumps ATPases(2) | AT1G76030 | 95.9 | 1.6e-268 | 922.2 | |
| Cma11g01365 | CST | 37 | 494 | Primary Pumps ATPases(2) | AT1G76030 | 94.0 | 9.4e-253 | 869.8 | |
| Cma19g00752 | CST | 37 | 526 | Primary Pumps ATPases(2) | AT4G38510 | 95.3 | 1.5e-269 | 925.6 | |
| Cma11g01365 | CST | 37 | 494 | Primary Pumps ATPases(2) | AT4G38510 | 94.0 | 8.7e-254 | 873.2 | |
| Cma19g00752 | CST | 41 | 526 | Primary Pumps ATPases(2) | AT1G20260 | 95.1 | 2.6e-266 | 914.8 | |
| Cma11g01365 | CST | 37 | 494 | Primary Pumps ATPases(2) | AT1G20260 | 93.4 | 6.8e-251 | 863.6 | |
| Cma15g00782 | . | 1 | 376 | Primary Pumps ATPases(2) | AT1G12840 | 82.7 | 1.3e-180 | 629.8 | |
| Cma04g02250 | . | 1 | 376 | Primary Pumps ATPases(2) | AT1G12840 | 82.7 | 4.8e-180 | 627.9 | |
| Cma11g01948 | . | 591 | 851 | Primary Pumps ATPases(2) | AT3G58730 | 80.8 | 1.3e-115 | 413.3 | |
| Cma02g00580 | . | 67 | 327 | Primary Pumps ATPases(2) | AT3G58730 | 80.1 | 3.8e-115 | 411.8 | |
| Cma11g01534 | . | 1 | 221 | Primary Pumps ATPases(2) | AT4G11150 | 76.6 | 3.3e-86 | 315.5 | |
| Cma14g00746 | . | 1 | 209 | Primary Pumps ATPases(2) | AT4G11150 | 75.2 | 1.6e-80 | 296.6 | |
| Cma11g01534 | . | 1 | 219 | Primary Pumps ATPases(2) | AT3G08560 | 67.6 | 4.2e-73 | 271.9 | |
| Cma14g00746 | . | 1 | 210 | Primary Pumps ATPases(2) | AT3G08560 | 67.9 | 2.6e-70 | 262.7 | |
| Cma14g00746 | . | 1 | 184 | Primary Pumps ATPases(2) | AT1G64200 | 74.3 | 4.8e-67 | 251.5 | |
| Cma11g01534 | . | 1 | 183 | Primary Pumps ATPases(2) | AT1G64200 | 73.7 | 7.7e-65 | 244.2 | |
| Cma04g02008 | . | 1 | 126 | Primary Pumps ATPases(2) | AT4G02620 | 84.1 | 2.3e-57 | 218.8 | |
| Cma10g01123 | . | 1 | 126 | Primary Pumps ATPases(2) | AT4G02620 | 84.1 | 2.3e-57 | 218.8 | |
| Cma14g00208 | CST | 105 | 212 | Primary Pumps ATPases(2) | AT3G01390 | 78.7 | 5.1e-37 | 151.0 | |
| Cma06g00375 | CST | 292 | 399 | Primary Pumps ATPases(2) | AT3G01390 | 79.6 | 5.1e-37 | 151.0 | |
| Cma07g00813 | . | 3 | 454 | Primary Pumps ATPases(2) | AT3G42050 | 79.2 | 2.4e-207 | 718.8 | |
| Cma14g00502 | . | 3 | 454 | Primary Pumps ATPases(2) | AT3G42050 | 79.6 | 3.0e-205 | 711.8 | |
| Cma20g00461 | CST | 1 | 814 | Primary Pumps ATPases(2) | AT2G28520 | 80.9 | 0.0e+00 | 1332.0 | |
| Cma02g00864 | CST | 1 | 811 | Primary Pumps ATPases(2) | AT2G28520 | 79.9 | 0.0e+00 | 1310.8 | |
| Cma12g00431 | CST | 1 | 803 | Primary Pumps ATPases(2) | AT2G28520 | 62.7 | 7.5e-295 | 1010.4 | |
| Cma11g01088 | . | 38 | 841 | Primary Pumps ATPases(2) | AT2G28520 | 62.4 | 5.0e-291 | 997.7 | |
| Cma19g00683 | . | 10 | 941 | Primary Pumps ATPases(2) | AT2G28520 | 54.8 | 1.7e-278 | 956.1 | |
| Cma11g01088 | . | 34 | 846 | Primary Pumps ATPases(2) | AT2G21410 | 75.8 | 0.0e+00 | 1229.9 | |
| Cma12g00431 | CST | 1 | 808 | Primary Pumps ATPases(2) | AT2G21410 | 73.0 | 0.0e+00 | 1194.5 | |
| Cma19g00683 | . | 6 | 946 | Primary Pumps ATPases(2) | AT2G21410 | 66.1 | 0.0e+00 | 1189.9 | |
| Cma20g00461 | CST | 9 | 818 | Primary Pumps ATPases(2) | AT2G21410 | 62.1 | 4.3e-298 | 1021.1 | |
| Cma02g00864 | CST | 9 | 816 | Primary Pumps ATPases(2) | AT2G21410 | 62.6 | 4.7e-297 | 1017.7 | |
| Cma11g01088 | . | 36 | 846 | Primary Pumps ATPases(2) | AT4G39080 | 76.3 | 0.0e+00 | 1225.3 | |
| Cma19g00683 | . | 8 | 946 | Primary Pumps ATPases(2) | AT4G39080 | 66.7 | 0.0e+00 | 1189.5 | |
| Cma12g00431 | CST | 1 | 808 | Primary Pumps ATPases(2) | AT4G39080 | 73.3 | 0.0e+00 | 1182.2 | |
| Cma20g00461 | CST | 9 | 818 | Primary Pumps ATPases(2) | AT4G39080 | 63.4 | 7.3e-298 | 1020.4 | |
| Cma02g00864 | CST | 9 | 816 | Primary Pumps ATPases(2) | AT4G39080 | 63.7 | 1.6e-297 | 1019.2 | |
| Cma12g00424 | . | 28 | 165 | Primary Pumps ATPases(2) | AT4G34720 | 99.3 | 1.9e-60 | 229.2 | |
| Cma12g00425 | CST | 27 | 164 | Primary Pumps ATPases(2) | AT4G34720 | 99.3 | 1.9e-60 | 229.2 | |
| Cma01g01395 | . | 28 | 165 | Primary Pumps ATPases(2) | AT4G34720 | 99.3 | 1.9e-60 | 229.2 | |
| Cma05g00288 | CST | 2129 | 2266 | Primary Pumps ATPases(2) | AT4G34720 | 99.3 | 1.9e-60 | 229.2 | |
| Cma05g00287 | CST | 28 | 165 | Primary Pumps ATPases(2) | AT4G34720 | 99.3 | 1.9e-60 | 229.2 | |
| Cma09g00796 | . | 28 | 151 | Primary Pumps ATPases(2) | AT4G34720 | 100.0 | 2.2e-53 | 205.7 | |
| Cma01g01395 | . | 1 | 122 | Primary Pumps ATPases(2) | AT1G19910 | 98.4 | 1.6e-52 | 202.6 | |
| Cma05g00288 | CST | 2102 | 2223 | Primary Pumps ATPases(2) | AT1G19910 | 98.4 | 1.6e-52 | 202.6 | |
| Cma05g00287 | CST | 1 | 122 | Primary Pumps ATPases(2) | AT1G19910 | 98.4 | 1.6e-52 | 202.6 | |
| Cma09g00796 | . | 1 | 122 | Primary Pumps ATPases(2) | AT1G19910 | 98.4 | 2.8e-52 | 201.8 | |
| Cma12g00424 | . | 1 | 122 | Primary Pumps ATPases(2) | AT1G19910 | 97.5 | 6.2e-52 | 200.7 | |
| Cma12g00425 | CST | 2 | 121 | Primary Pumps ATPases(2) | AT1G19910 | 99.2 | 6.2e-52 | 200.7 | |
| Cma12g00424 | . | 28 | 165 | Primary Pumps ATPases(2) | AT4G38920 | 99.3 | 5.4e-60 | 227.6 | |
| Cma12g00425 | CST | 27 | 164 | Primary Pumps ATPases(2) | AT4G38920 | 99.3 | 5.4e-60 | 227.6 | |
| Cma01g01395 | . | 28 | 165 | Primary Pumps ATPases(2) | AT4G38920 | 99.3 | 5.4e-60 | 227.6 | |
| Cma05g00288 | CST | 2129 | 2266 | Primary Pumps ATPases(2) | AT4G38920 | 99.3 | 5.4e-60 | 227.6 | |
| Cma05g00287 | CST | 28 | 165 | Primary Pumps ATPases(2) | AT4G38920 | 99.3 | 5.4e-60 | 227.6 | |
| Cma09g00796 | . | 28 | 151 | Primary Pumps ATPases(2) | AT4G38920 | 100.0 | 6.4e-53 | 204.1 | |
| Cma12g00424 | . | 2 | 165 | Primary Pumps ATPases(2) | AT1G75630 | 80.8 | 1.1e-66 | 250.4 | |
| Cma05g00288 | CST | 2103 | 2266 | Primary Pumps ATPases(2) | AT1G75630 | 80.8 | 1.9e-66 | 249.6 | |
| Cma05g00287 | CST | 2 | 165 | Primary Pumps ATPases(2) | AT1G75630 | 80.8 | 1.9e-66 | 249.6 | |
| Cma12g00425 | CST | 2 | 164 | Primary Pumps ATPases(2) | AT1G75630 | 80.7 | 5.5e-66 | 248.1 | |
| Cma01g01395 | . | 5 | 165 | Primary Pumps ATPases(2) | AT1G75630 | 81.0 | 7.2e-66 | 247.7 | |
| Cma09g00796 | . | 2 | 151 | Primary Pumps ATPases(2) | AT1G75630 | 79.3 | 2.9e-59 | 225.7 | |
| Cma12g00425 | CST | 1 | 164 | Primary Pumps ATPases(2) | AT2G16510 | 99.4 | 1.6e-74 | 276.2 | |
| Cma05g00288 | CST | 2104 | 2266 | Primary Pumps ATPases(2) | AT2G16510 | 99.4 | 5.9e-74 | 274.2 | |
| Cma05g00287 | CST | 3 | 165 | Primary Pumps ATPases(2) | AT2G16510 | 99.4 | 5.9e-74 | 274.2 | |
| Cma01g01395 | . | 3 | 165 | Primary Pumps ATPases(2) | AT2G16510 | 98.8 | 1.3e-73 | 273.1 | |
| Cma12g00424 | . | 3 | 165 | Primary Pumps ATPases(2) | AT2G16510 | 98.8 | 2.3e-73 | 272.3 | |
| Cma09g00796 | . | 3 | 151 | Primary Pumps ATPases(2) | AT2G16510 | 99.3 | 2.7e-66 | 248.8 | |
| Cma01g01490 | . | 8 | 180 | Primary Pumps ATPases(2) | AT4G32530 | 76.8 | 1.5e-74 | 276.6 | |
| Cma12g00314 | . | 1 | 180 | Primary Pumps ATPases(2) | AT4G32530 | 72.9 | 9.3e-72 | 267.3 | |
| Cma05g00409 | . | 1 | 180 | Primary Pumps ATPases(2) | AT4G32530 | 72.9 | 2.7e-71 | 265.8 | |
| Cma01g01490 | . | 4 | 180 | Primary Pumps ATPases(2) | AT2G25610 | 82.5 | 3.8e-71 | 265.4 | |
| Cma12g00314 | . | 4 | 180 | Primary Pumps ATPases(2) | AT2G25610 | 84.2 | 6.5e-71 | 264.6 | |
| Cma05g00409 | . | 10 | 180 | Primary Pumps ATPases(2) | AT2G25610 | 86.0 | 1.2e-69 | 260.4 | |
| Cma11g01035 | . | 1 | 351 | Primary Pumps ATPases(2) | AT3G28710 | 94.3 | 7.4e-199 | 690.3 | |
| Cma11g01035 | . | 1 | 351 | Primary Pumps ATPases(2) | AT3G28715 | 92.0 | 8.6e-192 | 666.8 | |
| Cma13g00147 | CST | 42 | 1106 | Primary Pumps ATPases(2) | AT1G07810 | 80.7 | 0.0e+00 | 1673.3 | |
| Cma01g00579 | CST | 1 | 1065 | Primary Pumps ATPases(2) | AT1G07810 | 80.4 | 0.0e+00 | 1653.3 | |
| Cma13g00147 | CST | 63 | 1087 | Primary Pumps ATPases(2) | AT4G00900 | 66.2 | 0.0e+00 | 1333.2 | |
| Cma01g00579 | CST | 22 | 1045 | Primary Pumps ATPases(2) | AT4G00900 | 65.2 | 0.0e+00 | 1305.4 | |
| Cma12g00603 | . | 1 | 1032 | Primary Pumps ATPases(2) | AT1G10130 | 79.6 | 0.0e+00 | 1590.5 | |
| Cma13g00147 | CST | 42 | 1106 | Primary Pumps ATPases(2) | AT1G07670 | 80.6 | 0.0e+00 | 1673.7 | |
| Cma01g00579 | CST | 1 | 1065 | Primary Pumps ATPases(2) | AT1G07670 | 80.1 | 0.0e+00 | 1652.9 |
Syn-Orthogroups
| Select | Orthogroup | Bda | Bhi | Blo | Bma | Bpe | Cam | Car | Cco | Cec | Chy | Cla | Clacu | Cma | Cme | Cmetu | Cmo | Cmu | Cone | Cpe | Cre | Csa | HCH | Hepe | Lac | Lcy | Lsi | Mch | Sed | Tan | Vvi | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OG0001947 | 2 | 4 | 2 | 3 | 2 | 2 | 3 | 2 | 2 | 2 | 2 | 2 | 3 | 2 | 2 | 3 | 2 | 2 | 3 | 2 | 2 | 1 | 1 | 2 | 1 | 2 | 2 | 3 | 3 | 2 | 66 |
Transcriptome
| Select | Gene | Chr | Type | da1 | da2 | da3 | da4 | da5 | da6 | da7 | da8 | da9 | da10 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Cma01g01490 | Cma_Chr01 | FPKM | 24.058283 | 22.769989 | 14.25578 | 13.853905 | 11.461077 | 9.354607 | 10.465272 | 11.767652 | 11.575462 | 12.549693 |