Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma01g01581 ATGATGCCTCTTCTCACTACACAGTTCCTCCAATTCAACTGCCCAAAATTGTGTGTTTCAGAAATGGCACCGAGATTGGGGTTTTTGTGTTGGTGGGGAACGGAGAAGGACTCTCAAAAGGGAACTCCGGTGGTTGTGACGATGGAGAAACCCAACTTCTCCGTCGTTGAGATCGACGGTCCTGACGCCGCATTCCGGCCGGTGGAAAAAAGTAGAGGCAAAAATGCTAAACAAGTCACATGGGTTCTTCTTTTAAAAGCCAATCGAGCTGTCGGTTGCATTACTTGGCTTGTTACAGTCCTCTGGGCCTTATTGGGAACAATCAAGAAGAGGCTGATCTACAGGCAAGGAGTCGCCATTGAAGGCGGGAAGTTGGGAAGAGGGAGGTTACTGTTTGGAGTTATTAGAGCTTTCTTAGTGACTTCCATGGCGATTCTTGCTTTTGAAATGCTTGCTTATTTCAGAGGCTGGCATTATTTTCAGAACCCTAATCTCCACATTCCTCAGGCTTCTGATTTGCAAGGATTGCTTCATTCACTCTATGTTGCTTGGTTAACTTTTAGAGCAGACTACATTGCTCCTCTCATTCAAACACTCTCTAAATTTTGCATTGTTTTGTTCCTTATCCAATCAGTGGATCGTATGATCCTTTGTTTTGGTTGCTTGTGGATAAAGTGCAAAAGAATTGAACCCAAGATTCAAGGGGATCCCTTCAGGTTGGATGATGTGGAGGGAGCTGGACACAAGTATCCAATGGTTCTTGTTCAAATTCCCATGTGCAACGAGCGCGAGGTTTACGAGCAGTCTATCTCTGCAGTCTGTCAGATCGATTGGCCAAGGGACCGTTTACTAATTCAAGTTCTTGATGATTCTGATGATGAGAACATTCAAGTGCTAATTAAGGCAGAGGTTGCTAAATGGAGCCAGAAGGGAGTGAACATAATCTATCACCATCGATTAATAAGAACAGGATATAAAGCTGGGAATCTCAAGTCTGCAATGAGTTGTGACTATGTTAGAGACTATGAATTTGTAGCAATTTTTGATGCTGACTTTCAACCAAATCCAGATTTTCTTAAACTCACAGTTCCTCATTTCAAGGATAACCCGGAGCTCGGTTTGGTTCAGGCCAGATGGTCTTTCGTGAACAAGGATGAAAACTTGCTGACACGTCTTCAGAACATTAACTTGTGTTTCCACTTTGAGGTAGAACAGCAGGTTAATGGAGTGTTTCTTAATTTCTTCGGTTTCAATGGCACTGCTGGTGTTTGGAGAATTAAAGCCCTCGAGGAGTCCGGAGGATGGCTCGAAAGAACAACAGTAGAGGATATGGATATAGCTGTGAGAGCCCATCTTAACGGCTGGAAATTTGTATTTCTAAACGACGTTAAGGTTCTTTGCGAAGTTCCCGAGTCGTATGAAGCATATAGGAAGCAGCAACATCGTTGGCATTCCGGTCCTATGCAACTATTCAGGTTGTGTCTTCCAGCAATCATAAGTTCTAAGATAGCAGCATGGAAAAAGGCAAATTTGATACTGATTTTCTTTCTATTAAGGAAGCTCATCCTTCCCTTCTATTCCTTCACGTTGTTCTGCATAATTCTTCCTCTAACCATGTTCGTACCCGAAGCCGAGCTTCCTCTATGGGTAGTCTGCTACGTGCCCGTTTTCATGTCCTTACTCAACATCCTTCCATCCCCAAAATCTTTTCCTTTTATCATCCCCTACCTTCTTTTCGAGAATACTATGTCTGTCACCAAATTCAATGCCATGGTATCTGGCTTATTCCAGCTCGGTAGCTCTTATGAGTGGATTGTGACTAAAAAAGCTGGCCGGTCCTCCGAATCCGACTTACTGGCTACTGCTGAAAGGGACTCGAAGGTAATGAATCAAGCGCTGATCTATAGAGGCGCTTCTGAGAGCGAGCTTTCTGAGTTGAGCCACTTAAAGGAATGCGAAAAAGTAGTCGCTGCACCTGTCAAAAAAGTTAACAAGATATATCGGAAAGAGCTAGCGCTCGCGTTTCTTTTACTTTTAGCTTCACTCAGGAGTCTCTTGGCTGCACAAGGAGTCCACTTCTACTTCTTGATGTTCCAAGGTGTGACCTTCCTCCTTGTAGGCCTTGATCTAATTGGAGAGCAAATGAGCTAA 2151 43.75 MMPLLTTQFLQFNCPKLCVSEMAPRLGFLCWWGTEKDSQKGTPVVVTMEKPNFSVVEIDGPDAAFRPVEKSRGKNAKQVTWVLLLKANRAVGCITWLVTVLWALLGTIKKRLIYRQGVAIEGGKLGRGRLLFGVIRAFLVTSMAILAFEMLAYFRGWHYFQNPNLHIPQASDLQGLLHSLYVAWLTFRADYIAPLIQTLSKFCIVLFLIQSVDRMILCFGCLWIKCKRIEPKIQGDPFRLDDVEGAGHKYPMVLVQIPMCNEREVYEQSISAVCQIDWPRDRLLIQVLDDSDDENIQVLIKAEVAKWSQKGVNIIYHHRLIRTGYKAGNLKSAMSCDYVRDYEFVAIFDADFQPNPDFLKLTVPHFKDNPELGLVQARWSFVNKDENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFVFLNDVKVLCEVPESYEAYRKQQHRWHSGPMQLFRLCLPAIISSKIAAWKKANLILIFFLLRKLILPFYSFTLFCIILPLTMFVPEAELPLWVVCYVPVFMSLLNILPSPKSFPFIIPYLLFENTMSVTKFNAMVSGLFQLGSSYEWIVTKKAGRSSESDLLATAERDSKVMNQALIYRGASESELSELSHLKECEKVVAAPVKKVNKIYRKELALAFLLLLASLRSLLAAQGVHFYFLMFQGVTFLLVGLDLIGEQMS 716
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 10915923 10919118 - CmaCh01G015810.1 Cma01g01581 287274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma01g01581 716 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 243 470 IPR029044 -
Cma01g01581 716 SUPERFAMILY Nucleotide-diphospho-sugar transferases 250 530 IPR029044 -
Cma01g01581 716 Pfam Glycosyl transferase family group 2 345 547 IPR001173 -
Cma01g01581 716 PANTHER - 34 716 - -
Cma01g01581 716 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 5-RELATED 34 716 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma01g01581 Cma09g00534 CCT
Cma01g01581 Cma09g00534 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g01581 Cma-Chr1:10915923 Cma15g00318 Cma-Chr15:1478058 0 dispersed
Cma01g01581 Cma-Chr1:10915923 Cma09g00534 Cma-Chr9:2381792 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma01g01581 - - csv:101217415 1281.93