Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma01g01585 ATGTGGTTACCAAGATACAGCTTAGACAGAAAAGAGAGATTGAATGTGAATGGATTTGTGGCGGTGGCCATTGACAAAGACAAAGGCAGCCAAGGGGCTCTCAAATGGGCAATTGATCATTTGCTTCGTAGAGGCCAAACTGTTTTCCTCGTTCATGTCAAACTCAGATCCCCTTCTAATTCTTCCCTAAAGATGAAATGTGACCCTGAAGCTGGCGTCAGAGAATTATTCCTTCCTTTTCGTTGCTTTTGTACTCGAAAAGATATTCAATGCAAAGATGTTGTATTGGAAGATACAGACATAGCTAAGGCCTTAACTGAGTATGCTGCAAATACAGCCATAGAGAACATTGTTGTGGGAGCTTCATCAAAATCTGGCTTTTTAAGATTCAAGGCAACTGATGTTCCTGGAAATGTCTCAAAAGGAGCACCAGATTTTTGCAATGTGTTTGTCATTTCTAAAGGTAAAATTCAATCGATGCGTTCAGCGTCTCGTCCTGCTCCGGTCGTGAATCCTCTACGGTCGCAATTAGTGCAACAAAGCAGCACAAAATCCATCAGGTCCGACTACCAATTTCCTCAGACTACATCTGCAAGAGACTCTTTGGATAAACGTCCCATTGATCTGCCACGTAGATCGCAGGACGAGACGGATTTCATGAGGTCACCCTTCACAAGGAAAGGATACAATTACAAACCGTCGTATGGAGATTCGTCTTTTCAAGAATCAGATATATCGTACGTTAGCTCAGGAAGACCGAGCATTGATCGTATATTTCCTTCAGTTTATGACAGCCTAGATATGGGAGGAAGAGCCACCCCACCACGGATGTCGAGTAGTACAAATCTTGACTTGACTCGGAGCTTCGAGTCTCTACCGATGGGACGGTTATCGATGGATATGAACTTCCCGTCTGAGTTCTCTTCGATCTCGCAAGATAGTGATAGATTGTCAATCTCATCACAGTCTTTGGAAGATGTGGAGGCTGAGATGCGTAGGCTCAAGCTAGAACTCAAGCAAACCATGGAAATGTACAGCACAGCCTGCAAGGAAGCACTTACAGCAAAACAAAAGGCGGTCGAGCTGCAACGCTGGAAATTAGAAGAAGAACAAAGAATAGAAGAGGCGAGATTGGCCGGGGAAGCTGCATTGGCGCTAGCCGAACAGGAGAAGGCGAAGTCAAAAGCAGCCATTGAGGCGGCAGAAGCAGCTAGGAGGATTGCAGAATTGGAAGCACAGAAAAGAATGAAGGCTGAAATGAAAGCTCACAAAGAAGCTGAAGAAAAGAAAAGGGCTATTGATGCATTGTCACAAAGCGATATCAGGTATAGAAAGTATACGATCGAGGAGATCGAAGAGGCAACGGAATTCTTTGCTGAATCTCGTAAGATCGGAGAAGGCGGTTATGGTCCGGTTTACAATTGTGATCTTGATCATACTCCTGTTGCCATTAAGGTTTTACGTCCCGATGCAACTCAAGGACGATTGCAGTTTAAACAAGAGGTAGAAGTACTTAGCTGTATACGCCATCCAAACATGGTGCTCCTCCTCGGAGCGTGCCCCGAGTACGGCTGCTTGGTCTATGAGTTCATGGCTAATGGGAGCTTAGAAGATCGACTTCTACGACGAGGAAACACGCCTCCACTTTCGTGGCAGCTCAGGTTTCAAATTGCAGGTGAAATTGGAACAGCATTGTTGTTCCTACACCAAACAAAGCCAGAGCCACTCGTGCATCGTGATCTCAAACCAGCTAATATTTTGCTCGATCGTAACTTTGTTAGTAAGATCAGCGACGTTGGCTTAGCTAGGCTCGTACCTCCATCGGTTGCGGATAACGTAACACAGTACCGAATGACATCAACTGCTGGAACATTTTGCTACATTGATCCCGAGTATCAGCAGACAGGCATGCTTGGCGTGAAATCAGACATATACTCATTAGGCATCATGTTTCTCCAGCTGATAACTTCTCGACCGCCAATGGGATTGACTCACCATGTCGAACGAGCGATCGAGAATGACATGTTTGCAAATATTCTCGATCCAGCCGTTACCGATTGGCCTGTTGAAGAAGCGTTGTCGTTTGCCAAGTTGTCGCTCAAGTGTGCCGAGTTAAGACGTAAAGATAGGCCTGATCTTGGAAAGGAAGTCCTTCCCGAGCTTAACAGGTTGAGAACTATTGCAGAAGATTATATGCACCCAACACTGATGGGAGACATAAGCCCCACTCGCAGCAGCAGCCAAGTTTCTATACCGTTGGGAATGATGAGTTCATCTCCGCAATCATACGACAGCTCGAGATAA 2304 45.49 MWLPRYSLDRKERLNVNGFVAVAIDKDKGSQGALKWAIDHLLRRGQTVFLVHVKLRSPSNSSLKMKCDPEAGVRELFLPFRCFCTRKDIQCKDVVLEDTDIAKALTEYAANTAIENIVVGASSKSGFLRFKATDVPGNVSKGAPDFCNVFVISKGKIQSMRSASRPAPVVNPLRSQLVQQSSTKSIRSDYQFPQTTSARDSLDKRPIDLPRRSQDETDFMRSPFTRKGYNYKPSYGDSSFQESDISYVSSGRPSIDRIFPSVYDSLDMGGRATPPRMSSSTNLDLTRSFESLPMGRLSMDMNFPSEFSSISQDSDRLSISSQSLEDVEAEMRRLKLELKQTMEMYSTACKEALTAKQKAVELQRWKLEEEQRIEEARLAGEAALALAEQEKAKSKAAIEAAEAARRIAELEAQKRMKAEMKAHKEAEEKKRAIDALSQSDIRYRKYTIEEIEEATEFFAESRKIGEGGYGPVYNCDLDHTPVAIKVLRPDATQGRLQFKQEVEVLSCIRHPNMVLLLGACPEYGCLVYEFMANGSLEDRLLRRGNTPPLSWQLRFQIAGEIGTALLFLHQTKPEPLVHRDLKPANILLDRNFVSKISDVGLARLVPPSVADNVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIMFLQLITSRPPMGLTHHVERAIENDMFANILDPAVTDWPVEEALSFAKLSLKCAELRRKDRPDLGKEVLPELNRLRTIAEDYMHPTLMGDISPTRSSSQVSIPLGMMSSSPQSYDSSR 767
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 10935651 10941910 - CmaCh01G015850.1 Cma01g01585 287278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma01g01585 767 MobiDBLite consensus disorder prediction 178 213 - -
Cma01g01585 767 SMART serkin_6 458 718 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma01g01585 767 ProSitePatterns Serine/Threonine protein kinases active-site signature. 576 588 IPR008271 GO:0004672|GO:0006468
Cma01g01585 767 Gene3D Phosphorylase Kinase; domain 1 436 530 - -
Cma01g01585 767 Pfam Protein kinase domain 459 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma01g01585 767 SUPERFAMILY Protein kinase-like (PK-like) 437 714 IPR011009 -
Cma01g01585 767 Coils Coil 317 344 - -
Cma01g01585 767 Gene3D HUPs 11 152 IPR014729 -
Cma01g01585 767 CDD STK_N 20 155 - -
Cma01g01585 767 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34-LIKE 12 766 - -
Cma01g01585 767 PANTHER OS02G0152300 PROTEIN 12 766 - -
Cma01g01585 767 ProSiteProfiles Protein kinase domain profile. 458 736 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma01g01585 767 MobiDBLite consensus disorder prediction 178 200 - -
Cma01g01585 767 Coils Coil 384 430 - -
Cma01g01585 767 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 20 152 - -
Cma01g01585 767 Coils Coil 350 370 - -
Cma01g01585 767 MobiDBLite consensus disorder prediction 739 767 - -
Cma01g01585 767 Pfam Universal stress protein family 21 144 IPR006016 -
Cma01g01585 767 MobiDBLite consensus disorder prediction 738 767 - -
Cma01g01585 767 Gene3D Transferase(Phosphotransferase) domain 1 531 735 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma01g01585 Cma09g00539 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g01585 Cma-Chr1:10935651 Cma11g01405 Cma-Chr11:9232327 0 dispersed
Cma01g01585 Cma-Chr1:10935651 Cma12g00277 Cma-Chr12:1436928 0 wgd
Cma01g01585 Cma-Chr1:10935651 Cma05g00620 Cma-Chr5:3113792 0 wgd
Cma01g01585 Cma-Chr1:10935651 Cma09g00539 Cma-Chr9:2408437 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68295 PF00069 Pkinase 9.40E-39 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma01g01585 - - csv:105435028 1229.54