Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma01g01777 | ATGATCATCAGAACCTTCTCGACTCCTGCATTCGTAATGAAAAGAAAACCACATATCTTGTTGGTGTTCTTTCGAATTTGGTGCGCTTGGATTTCTCCGATGGCCACTTTTGGTGGTTTCAGATCTTATGTGCTCTCCGCCGCCGCTGCAGGCTCATTCTGGAGTGTGAAGTATCTGCCAGGATTTGCAGGGCCTCTTCCGTTTGAACTCGAAACTGGATATGTCGGTGTGGGGGATTCGGAGGAAGTTCAGGTGTTTTATTACTTTGTGAAGTCCCAAGGAAATCCCCAAACCGATCCTCTAATGACATGGCTCATCGGAGGTCCCGGTTGCTCTGCTCTCTCTGGATTCGCCGTGGAAATCGGTCCAGTAAATTTCAAGATAGAGCCATACAATGGAAGCACACCTCAACTGATCTTGAATCCCCATTCATGGACCAAGGTTGTAACAATTATTCACCTTTTTATTTCTTTTGCAATGACACTAACTTGCAATAGGGATGGTGATATCTGCCAGAAAGCCAGTATATTATTTATAGATATGCCTGTGGGCACTGGATTTTCATATGCTCGAACTCCACAAGGCTTGAAGAAAGGAGATCTACTTCAAGTTCAACAAAATCATCAATTTTTGCGAAAGTGGCTGACTGATCACCCAGAGTTCATTCCTAATCCATTTTACGTCGGTGGGGACTCGTATTCTGGTATCATTATTCCACCTCTTACTCAAGCAATTTCAGAAGGAAATAAACATCTCTTCCCAGCTATAAACCTTCAGGGATACATAGAAGGAAATCCTTTTAGTGTACGTAGAACAGTTAATAATTATAGGGTTCATTATGCTCATAAGATGTCCCTCGTCTCTGATGAACTATATGAGTCATTGAAAACTAGTTGCAAAGGAGAATTTGAGAGTATCGATCCAATTAATTTGGAGTGCATCAAACATGTTTCTACATATAAAAAGTGTGTGAGTAGAATCAGTTTAGCATGTATTATGTGTCCTTATTGTACCGATGCTTCTCGAGCGCCAGAAAATACGTTTGGTGGGCAGAGATCCCTCTATGATACATCCCAAAATCTGTTTCTGGCTCCTAGAGTGTTACCTCCTCTTTCTCTTGACTGTGATGAGTATAAATACTACCTTAGTTATTATTGGGCGAACGACAATCAAGTTCGGAAAGCACTTCATATACGCGAGGGAACGGTTGGAGAATGGTTTAGATGCGAAAGTAAAAAAGATTATCAATTTGATATTACGAATGTTCTTCCTTATCATGTGAATCTTAGCTCCAAAGATTATCGATCTTTGATTTTTAGTGGGGATCATGATATGATGGTGCCGATTCTAGACACTGAAGCATGGATCAAATCTCTAAATTATTCCATTGTCGATGAGTGGAGACCTTGGTTTGACGATGAGGATCAAGTACTTGGATACACAAGAACTTTTGCAAACAACATGACATTTGCCACGATAAAAGTGGTCTCCGCCGCCGCAGGCTCATTCTGGAGTGTGAAGTATCTGCCAGGATTTTCAGGGCCTCTTCCATTTGAACTCGAAACTGGATACGTGGGTGTGGGAGATTCGGAGGAAGTTCAGGTGTTCTATTACTTTGTGAAGTCCCAAGGAAATCCCCGAACCGATCCTCTAATGACATGGTACATCGGCGGTCCAGGTTGCTCTGCACTCTGTGGCTTTGCCTTGGAAATTGGCCCTCTGAACTTCAAGATAGAGGCATACAATGGAAGCTGGCTGGCTGATCATCCAGAATTCATTCGTAACCCATTTTATGTTGGTGGTGGCTCGTATTCTGGTATGATTGTTCCATCTCTTACTCAAGCAATCTCAGAAGGTAATAGCCATGGCTTCCCAATTATAAACCTTCAGGGATACATAGAGGGCAATCCTTTCAGTGTGCATAAAACAAATGATAATTATAAGATTCCATATGCTCATAGGATGTCCTTCATCTCCGATGAACTATACGAGTCATTGAGAAGCAGCTGCAAAGGAGAATATAATAATGTTGATCCAACTAATGTGGAGTGCATTAAATATGTATCCGCTTACCAAAAGCCTCACTGTGAGGATGCTACTAAAGTGACGGAAGCTGCTACGTTTAATGATGCGAGGAGATCCCTCTACAATGCTTCTGAACAACAGTTTCTTTCTCCCAGAGTGTTGCCTTCGATTCCTCTCGAGTGTGATGAGTATGCGTTTTACCTCAGTTATTATTGGGCTAATGACAATCGAGTTCGGAAAGCTCTCCATGTACGTGAGGGAACAATTGGAGAATGGTTTAGATGTCAAAGTACAAAAGATTACCAATATGATTTCACGAGTATGGTTCCTTATCATATGAATCTTAGCTCTAAGGGCTATAGGTCTTTGATTTTTAGCGGAGATCATGATATGAAGGTGCCAATTTTGGACACTGAAGCATGGATCAAATCTCTAAATTATTCACTTATTGATGAATGGAGGCCTTGGTTTAACGAGGAGGATCAAGTTCTTGGGTACACAAGGACTTATGCAAACAACATGACATTTGTATCCATAAAAGGCGGAGGACACACCCCACAAACCATGCAGCACCAAAGTGGCATAATGTTTAGCAGATGGATAGTTGGAAATCCGTTGTAA | 2646 | 41.69 | MIIRTFSTPAFVMKRKPHILLVFFRIWCAWISPMATFGGFRSYVLSAAAAGSFWSVKYLPGFAGPLPFELETGYVGVGDSEEVQVFYYFVKSQGNPQTDPLMTWLIGGPGCSALSGFAVEIGPVNFKIEPYNGSTPQLILNPHSWTKVVTIIHLFISFAMTLTCNRDGDICQKASILFIDMPVGTGFSYARTPQGLKKGDLLQVQQNHQFLRKWLTDHPEFIPNPFYVGGDSYSGIIIPPLTQAISEGNKHLFPAINLQGYIEGNPFSVRRTVNNYRVHYAHKMSLVSDELYESLKTSCKGEFESIDPINLECIKHVSTYKKCVSRISLACIMCPYCTDASRAPENTFGGQRSLYDTSQNLFLAPRVLPPLSLDCDEYKYYLSYYWANDNQVRKALHIREGTVGEWFRCESKKDYQFDITNVLPYHVNLSSKDYRSLIFSGDHDMMVPILDTEAWIKSLNYSIVDEWRPWFDDEDQVLGYTRTFANNMTFATIKVVSAAAGSFWSVKYLPGFSGPLPFELETGYVGVGDSEEVQVFYYFVKSQGNPRTDPLMTWYIGGPGCSALCGFALEIGPLNFKIEAYNGSWLADHPEFIRNPFYVGGGSYSGMIVPSLTQAISEGNSHGFPIINLQGYIEGNPFSVHKTNDNYKIPYAHRMSFISDELYESLRSSCKGEYNNVDPTNVECIKYVSAYQKPHCEDATKVTEAATFNDARRSLYNASEQQFLSPRVLPSIPLECDEYAFYLSYYWANDNRVRKALHVREGTIGEWFRCQSTKDYQYDFTSMVPYHMNLSSKGYRSLIFSGDHDMKVPILDTEAWIKSLNYSLIDEWRPWFNEEDQVLGYTRTYANNMTFVSIKGGGHTPQTMQHQSGIMFSRWIVGNPL | 881 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 11913439 | 11920667 | + | CmaCh01G017770.1 | Cma01g01777 | 287470 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma01g01777 | 881 | Pfam | Serine carboxypeptidase | 584 | 877 | IPR001563 | GO:0004185|GO:0006508 | |
Cma01g01777 | 881 | Pfam | Serine carboxypeptidase | 172 | 494 | IPR001563 | GO:0004185|GO:0006508 | |
Cma01g01777 | 881 | Pfam | Serine carboxypeptidase | 510 | 577 | IPR001563 | GO:0004185|GO:0006508 | |
Cma01g01777 | 881 | Pfam | Serine carboxypeptidase | 60 | 154 | IPR001563 | GO:0004185|GO:0006508 | |
Cma01g01777 | 881 | Gene3D | - | 374 | 502 | - | - | |
Cma01g01777 | 881 | PANTHER | SERINE CARBOXYPEPTIDASE-LIKE 1-RELATED | 584 | 879 | - | - | |
Cma01g01777 | 881 | Gene3D | alpha/beta hydrolase | 582 | 880 | IPR029058 | - | |
Cma01g01777 | 881 | Gene3D | alpha/beta hydrolase | 504 | 581 | IPR029058 | - | |
Cma01g01777 | 881 | Gene3D | alpha/beta hydrolase | 54 | 348 | IPR029058 | - | |
Cma01g01777 | 881 | PANTHER | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE | 584 | 879 | IPR001563 | GO:0004185|GO:0006508 | |
Cma01g01777 | 881 | PANTHER | SERINE CARBOXYPEPTIDASE-LIKE 1-RELATED | 47 | 496 | - | - | |
Cma01g01777 | 881 | SUPERFAMILY | alpha/beta-Hydrolases | 55 | 494 | IPR029058 | - | |
Cma01g01777 | 881 | SUPERFAMILY | alpha/beta-Hydrolases | 506 | 878 | IPR029058 | - | |
Cma01g01777 | 881 | PANTHER | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE | 47 | 496 | IPR001563 | GO:0004185|GO:0006508 | |
Cma01g01777 | 881 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 849 | 862 | IPR001563 | GO:0004185|GO:0006508 | |
Cma01g01777 | 881 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 141 | 153 | IPR001563 | GO:0004185|GO:0006508 | |
Cma01g01777 | 881 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 214 | 239 | IPR001563 | GO:0004185|GO:0006508 | |
Cma01g01777 | 881 | PANTHER | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE | 499 | 578 | IPR001563 | GO:0004185|GO:0006508 | |
Cma01g01777 | 881 | PANTHER | SERINE CARBOXYPEPTIDASE-LIKE 1-RELATED | 499 | 578 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma01g01777 | Cma12g00246 | CCT | |
Cma01g01777 | Cma09g00299 | CST | |
Cma01g01777 | Cma05g00116 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma01g01777 | Cma-Chr1:11913439 | Cma17g01330 | Cma-Chr17:8956352 | 4.90E-14 | dispersed | |
Cma01g01777 | Cma-Chr1:11913439 | Cma09g00299 | Cma-Chr9:1226342 | 1.31E-15 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma01g01777 | K16296 | - | ini:109153033 | 782.711 |