Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma01g01785 | ATGGAAAGTTATTTGAATGAGAATTTCGGGGACGTGAAGCCGAAGAACTCGTCGGAAGAAGCGCTTCAGAGATGGAGGCGGCTTTGCTGGTTGGTGAAGAATCGTAGAAGAAGGTTTCGATTTACTGCTAATCTCTCTAAACGATTTGAGGCTGATGCTATTAGACGCTCCATTCAGGAGAAGTTCAGAGTTGCAGTTTTGGTTTCACAAGCAGCGCTTCAGTTCATCAATGGGTTGGATTTGTATCCTGATTACGTTGTGCCTGAAGGGGTCAGACAGGCAGGTTTTCAAATTTGTGCAGATGAAGCAGGCTCCATTGTTGACGGCCGTGATGTGAAGAAGCTGAAAATTCATGGGGGTGCAGAGGGTATTGCAACTAAGCTTGCTACATCAACGGAGACGGGCATTTCTACTACAGACCATTTGATAGAGAAAAGACAAGACATTTATGGAATTAACAAATTCACCGAAAGCCCATCTCGAGGATTTTTGCTCTTTCTTTGGGACGCTCTCCAGGATACAACTCTAATGATACTCGCGTTCTGTGCTGTAGTTTCCCTTCTTGTTGGCATAGCGATGGAAGGATGGCCGAAGGGTGCTCATGATGGGCTCGGCATTGTTGCGAGTATCTTACTTGTTGTATTTGTCACTGCTACCAGTGACTATAGACAATCGCTTCAGTTCAAGGATTTGGACAAGGAAAAGAAGAAAATTGCGGTTCAGGTTACCCGAAATGGGTTGAGACAAAAGATTTCTATATACGAACTTCTTCCTGGTGATATTGTTCATCTTGCCATGGGTGATCAGGTACCAGCAGATGGACTTTTTGTTTCAGGGTACTCTCTTCTGATAAATGAATCTAGTTTAACAGGTGAGAGCGAACCAGTTAACGTAAGTTGTCAAAACCCTTTCCTCTTGTCCGGAACAAAGGTTCAGGATGGTTCGTGTAAGATGGTTGTGACTTCTGTAGGCATGAGAACCCAATGGGGAAAACTGATGGCCACTCTAAGTGAAGGAGGAGACGACGAGACTCCTTTGCAGGTAAAGCTAAATGGGGTGGCAACAATTATTGGTAAAATAGGCCTGTTTTTTGCTGTCATAACTTTCGCTGTATTGGTTCAAGGATTGTTCACTCGCAAGCTACGAGAAGGGTCTTACTTCAGCTGGTCCGGAGATGAAGCAATGGAAGTTTTGGAATTTTTTGCTGTTGCCGTAACTATTGTTGTGGTTGCTGTGCCCGAAGGGCTGCCTTTGGCAGTGACACTGAGCCTTGCTTTTGCTATGAAAAAGATGATGAACGATAAGGCACTTGTCAGGCACTTAGCTGCTTGTGAGACGATGGGATCAGCTACTACTATTTGTAGTGACAAAACTGGGACATTGACGACTAACCACATGACTGTTGTGAAAGCCTGCATCTGCGGTAAGGTCAAGGAAGTTGGCAATTCTAGTAAGTGTTCTGATTATCGTTCAGAACTTCCCGACTCCGCTGTTGGTAGTTTACTGCAATCGATATTTAACAACACCGGTGGAGAAATCGTCAAGAACAAAGATGGCGAGAATGAGATACTTGGGACGCCCACCGAATCTGCTCTTCTGGAATTCGGCCTTCTGCTTGGTGGGGATTTTCAGAAAGAACGCCAAAAGTCAAAGATCGCGAGAGTCGATCCCTTCAATTCTGTGAAGAAACGAATGGGTGTTGTTTTGGAGCTCCCAGCCGGTGGCTTCCGCGCACACAGCAAAGGTGCTTCAGAGATCGTTTTGGCTTCATGTGACAAATTTCTTGACTCGAACGGTGAGGCAGCTCCTCTCAATGAAGAGTCCATCAGCTTTTTGAAGGAAACGATCGAAGAATTTGCGGGAGAAGCTCTTCGAACATTGTGCTTGGCTTACATGGACATTGATGGTGAGTATCAGTCTGAAAGTCCGATTCCCATGAGTGGCTACACGTGCATAGGAATTGTTGGCATTAAGGACCCCGTTCGTCCGGGTGTCAAGGAGTCTGTTGCGATTTGCAAGGCCGCCGGTATAACCGTACGGATGGTTACGGGAGATAACATCACCACCGCAAAAGCAATAGCCAGGGAATGTGGAATCTTGACTGACGATGGCATAGCAATTGAAGGTCCTGAATTCCGTGAGAAGGAGGAAGAGTGGAGTGAAATACTACCAAAAATTCAGGTCATGGCTCGATCTTCACCAATGGATAAACATACTCTTGTAAAGCACTTACGGACCACTTTTCAAGAAGTTGTTGCAGTGACTGGGGATGGCACAAATGATGCTCCGGCGCTCCATGAAGCAGATATTGGATTAGCTATGGGCATTGCTGGGACTGAGGTGGCAAAAGAGAGTGCTGATGTAATAATTCTCGATGACAACTTCTCTACAATTGCTACTGTTGCCAAATGGGGACGTTCAGTTTACATAAACATCCAGAAATTCGTTCAGTTTCAGCTAACTGTGAATGTGGTTGCACTCATCGTCAATTTTTCTTCAGCCTGTTTGACAGGAAATGCTCCCCTCACTGCTGTGCAACTGCTATGGGTCAATATGATAATGGATACACTAGGAGCACTTGCATTGGCAACTGAACCTCCTACTGATGACTTGATGAAGAGATTGCCAGTTGGTCGGAAAGGGAATTTCATCAGCAACGTGATGTGGAGAAATATCTTGGGGCAGTCAATATATCAGTTTGTAATAGTTTGGTTTCTCCAGACAAGAGGGCAGGCTCTTTTTCATCTTGATGGCCCAGACTCTGAATTGATACTGAATACACTGATTTTCAATGCATTCGTCTTTTGTCAGGTTTTCAATGAGATAAGCTCAAGAGACATGGAGAAGATAAATGTGCTTGAAGGAATATTGAAGAACTATGTCTTTGTGGCAGTTCTCGCTTGCACTGTACTTTTCCAGATCATAATCATCCAATTCCTGGGAACATTTGCAAACACCTATCCTCTAAACTCCCAGCAATGGTTTGTCACCGTGTTGTTTGGATTTCTTGGCATGCCAGTTGCAGCAGCGTTGAAAATGATTCCGGTAGGATCACACTGA | 3060 | 44.84 | MESYLNENFGDVKPKNSSEEALQRWRRLCWLVKNRRRRFRFTANLSKRFEADAIRRSIQEKFRVAVLVSQAALQFINGLDLYPDYVVPEGVRQAGFQICADEAGSIVDGRDVKKLKIHGGAEGIATKLATSTETGISTTDHLIEKRQDIYGINKFTESPSRGFLLFLWDALQDTTLMILAFCAVVSLLVGIAMEGWPKGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKIAVQVTRNGLRQKISIYELLPGDIVHLAMGDQVPADGLFVSGYSLLINESSLTGESEPVNVSCQNPFLLSGTKVQDGSCKMVVTSVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVITFAVLVQGLFTRKLREGSYFSWSGDEAMEVLEFFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKACICGKVKEVGNSSKCSDYRSELPDSAVGSLLQSIFNNTGGEIVKNKDGENEILGTPTESALLEFGLLLGGDFQKERQKSKIARVDPFNSVKKRMGVVLELPAGGFRAHSKGASEIVLASCDKFLDSNGEAAPLNEESISFLKETIEEFAGEALRTLCLAYMDIDGEYQSESPIPMSGYTCIGIVGIKDPVRPGVKESVAICKAAGITVRMVTGDNITTAKAIARECGILTDDGIAIEGPEFREKEEEWSEILPKIQVMARSSPMDKHTLVKHLRTTFQEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIATVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPTDDLMKRLPVGRKGNFISNVMWRNILGQSIYQFVIVWFLQTRGQALFHLDGPDSELILNTLIFNAFVFCQVFNEISSRDMEKINVLEGILKNYVFVAVLACTVLFQIIIIQFLGTFANTYPLNSQQWFVTVLFGFLGMPVAAALKMIPVGSH | 1019 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 11948321 | 11952905 | + | CmaCh01G017850.1 | Cma01g01785 | 287478 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma01g01785 | 1019 | Gene3D | - | 141 | 337 | - | - | |
Cma01g01785 | 1019 | Pfam | Ca2+-ATPase N terminal autoinhibitory domain | 5 | 49 | IPR024750 | GO:0005516 | |
Cma01g01785 | 1019 | Pfam | Cation transporter/ATPase, N-terminus | 119 | 186 | IPR004014 | - | |
Cma01g01785 | 1019 | Pfam | Cation transporting ATPase, C-terminus | 840 | 1014 | IPR006068 | - | |
Cma01g01785 | 1019 | Pfam | Cation transport ATPase (P-type) | 515 | 593 | - | - | |
Cma01g01785 | 1019 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 460 | 665 | IPR023299 | GO:0000166 | |
Cma01g01785 | 1019 | PANTHER | CATION TRANSPORTING ATPASE | 3 | 1017 | - | - | |
Cma01g01785 | 1019 | PRINTS | P-type cation-transporting ATPase superfamily signature | 285 | 299 | - | - | |
Cma01g01785 | 1019 | PRINTS | P-type cation-transporting ATPase superfamily signature | 454 | 468 | - | - | |
Cma01g01785 | 1019 | PRINTS | P-type cation-transporting ATPase superfamily signature | 653 | 664 | - | - | |
Cma01g01785 | 1019 | PRINTS | P-type cation-transporting ATPase superfamily signature | 675 | 685 | - | - | |
Cma01g01785 | 1019 | PRINTS | P-type cation-transporting ATPase superfamily signature | 755 | 774 | - | - | |
Cma01g01785 | 1019 | PRINTS | P-type cation-transporting ATPase superfamily signature | 779 | 791 | - | - | |
Cma01g01785 | 1019 | SFLD | C1.7: P-type atpase like | 436 | 807 | - | - | |
Cma01g01785 | 1019 | Gene3D | - | 17 | 77 | - | - | |
Cma01g01785 | 1019 | Pfam | haloacid dehalogenase-like hydrolase | 651 | 769 | - | - | |
Cma01g01785 | 1019 | SUPERFAMILY | HAD-like | 452 | 860 | IPR036412 | - | |
Cma01g01785 | 1019 | SFLD | p-type atpase | 436 | 807 | IPR044492 | - | |
Cma01g01785 | 1019 | Pfam | E1-E2 ATPase | 237 | 432 | - | - | |
Cma01g01785 | 1019 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 119 | 1015 | IPR023298 | - | |
Cma01g01785 | 1019 | Gene3D | - | 169 | 1014 | - | - | |
Cma01g01785 | 1019 | Gene3D | - | 451 | 800 | IPR023214 | - | |
Cma01g01785 | 1019 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 456 | 462 | IPR018303 | - | |
Cma01g01785 | 1019 | PRINTS | H+-transporting ATPase (proton pump) signature | 612 | 630 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cma01g01785 | 1019 | PRINTS | H+-transporting ATPase (proton pump) signature | 755 | 771 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cma01g01785 | 1019 | PRINTS | H+-transporting ATPase (proton pump) signature | 787 | 812 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cma01g01785 | 1019 | CDD | P-type_ATPase_Ca_PMCA-like | 143 | 888 | - | - | |
Cma01g01785 | 1019 | SUPERFAMILY | Calcium ATPase, transduction domain A | 239 | 334 | IPR008250 | - | |
Cma01g01785 | 1019 | SMART | Cation_ATPase_N_a_2 | 120 | 191 | IPR004014 | - | |
Cma01g01785 | 1019 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 3 | 1017 | - | - | |
Cma01g01785 | 1019 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 721 | 836 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cma01g01785 | 1019 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 387 | 476 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cma01g01785 | 1019 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 206 | 377 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cma01g01785 | 1019 | TIGRFAM | ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type | 111 | 1016 | IPR006408 | GO:0005388|GO:0005524|GO:0016020|GO:0070588 | |
Cma01g01785 | 1019 | Gene3D | - | 464 | 660 | IPR023299 | GO:0000166 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma01g01785 | Cma09g00290 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma01g01785 | Cma-Chr1:11948321 | Cma14g00550 | Cma-Chr14:2735274 | 0 | dispersed | |
Cma01g01785 | Cma-Chr1:11948321 | Cma03g00914 | Cma-Chr3:6618043 | 0 | wgd | |
Cma01g01785 | Cma-Chr1:11948321 | Cma07g00648 | Cma-Chr7:2816696 | 0 | wgd | |
Cma01g01785 | Cma-Chr1:11948321 | Cma09g00290 | Cma-Chr9:1192471 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma01g01785 | K01537 | - | csv:101221694 | 1864.74 |