Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma01g01832 ATGGCTCTAATGCTTGATAATTGCGAAGGCGTTTTGCTCTCTCTAGACTCCCACAAAGCCATCCCAGCTCCCTTTCTCACTAAAACCTACCAGCTCGTTGACGATCCCACCACCGACCATATTGTCTCATGGGGCGAAGATGACACCACCTTCGTCGTTTGGCGCCCTCCTGAATTCGCCAGAGATCTCCTTCCCAACTATTTCAAGCACAACAACTTCTCTAGCTTTGTCCGACAGCTCAACACCTATGGTTTTAGAAAAATTGTGCCGGACAGATGGGAATTCGCCAACGAGTTCTTCAGAAAAGGAGAGAAACATTTGTTATGTGAGATCCATCGACGAAAAACCGCTCAGCCTCAAGTCACCGTCAACCAACACCACCAATCTTATTCCCCACTCGGTCTCAACGCTGGCTTCTACCATTACCCTGCTCGAGTCAGCATCTCACCGTCCGACTCCGACGACAACCCCAATTGGTGTGACTCGCCGCCGCTCTCCTCCAACAACAACAACAACAACGTCTTCAACAACTCCGTCACTGCCCTGTCGGAGGACAACGAGCGTCTCCGTCGGAGCAACAACATGCTGATGTCAGAATTAGCCCACATGAAAAAGCTCTACAACGACATCATTTATTTCGTTCAAAACCACGTCAAACCCGTCGCTCCAAGCAATTCATATCAATATTCAACCTCTCTACTTTCCGATGGTTTTCCGGTGGGACAACGGCAGCCGAATCACCACCTTCTCGGGTACCATCCGACAAATGCGAAACAAGTTTCCGGGCAAACCCATTTCGTGGGCGGAACTCCAAATAATAATAATAATAATGGTTCGTCAAAAAGCTTCGTGACGATTGTAGAAGAGCCAAAAACGAAGCTTTTTGGAGTGTCGCTTCAATCCAAGAAACGGGTGCATCCGGAATATGGTTCTAATAATATCGCCAAAGAGAACAACAAGGCTCGATTGGTGCTGGAAAAAGATGATTTAGGGCTCAATCTCATGCCCCCTTCCGCTTGTTAG 1023 48.09 MALMLDNCEGVLLSLDSHKAIPAPFLTKTYQLVDDPTTDHIVSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANEFFRKGEKHLLCEIHRRKTAQPQVTVNQHHQSYSPLGLNAGFYHYPARVSISPSDSDDNPNWCDSPPLSSNNNNNNVFNNSVTALSEDNERLRRSNNMLMSELAHMKKLYNDIIYFVQNHVKPVAPSNSYQYSTSLLSDGFPVGQRQPNHHLLGYHPTNAKQVSGQTHFVGGTPNNNNNNGSSKSFVTIVEEPKTKLFGVSLQSKKRVHPEYGSNNIAKENNKARLVLEKDDLGLNLMPPSAC 340
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 12124903 12126674 + CmaCh01G018320.1 Cma01g01832 287525

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cma01g01832 340 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 12 338 IPR027725 -
Cma01g01832 340 ProSitePatterns HSF-type DNA-binding domain signature. 64 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Cma01g01832 340 PANTHER BNAC06G00310D PROTEIN 12 338 - -
Cma01g01832 340 SUPERFAMILY Winged helix DNA-binding domain 22 114 IPR036390 -
Cma01g01832 340 Pfam HSF-type DNA-binding 25 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Cma01g01832 340 Gene3D - 17 116 IPR036388 -
Cma01g01832 340 MobiDBLite consensus disorder prediction 149 176 - -
Cma01g01832 340 SMART hsfneu3 21 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Cma01g01832 340 PRINTS Heat shock factor (HSF) domain signature 25 48 IPR000232 GO:0003700|GO:0006355|GO:0043565
Cma01g01832 340 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Cma01g01832 340 PRINTS Heat shock factor (HSF) domain signature 76 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Cma01g01832 340 Coils Coil 179 199 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma01g01832 K09419 HSFF; heat shock transcription factor, other eukaryote - csv:101215518 517.694
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Cma01g01832 Cma05g00178 CCT
Cma01g01832 Cma09g00239 CST
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g01832 Cma-Chr1:12124903 Cma10g00883 Cma-Chr10:4354700 5.61E-68 dispersed
Cma16g00136 Cma-Chr16:599420 Cma01g01832 Cma-Chr1:12124903 4.29E-53 dispersed
Cma01g01832 Cma-Chr1:12124903 Cma05g00178 Cma-Chr5:753133 2.84E-145 wgd
Cma01g01832 Cma-Chr1:12124903 Cma09g00239 Cma-Chr9:1022745 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g752 Blo01g01525 . Bda01g00571 Bda03g00208 Bpe02g00432 Bpe04g00177 . Bma01g02269 Cmo05g00175 . Cma01g01832 Cma09g00239 Car01g01429 . Sed10g1244 Cpe06g00166 . Bhi04g00361 Tan02g1805 Cmetu03g2201 . Hepe08g1292 . Lcy13g2088 Cla08g01578 Cam08g2076 Cec08g1659 Cco08g1787 Clacu08g1762 . Cre08g1547 Cone4ag1583 Cone7ag1367 Cone17ag0846 Cone20ag0194 Lsi04g01548 Csa04g02421 . Cme03g02056 . . . . . Bpe05g00026 . . Sed01g2675 Cmo01g01891 Cmo09g00233 . Cma05g00178 Car05g00150 . Cpe11g00146 Cpe02g00187 Bhi09g03307 Tan01g4763 Cmetu07g0842 . Hepe01g1775 Mch11g0300 . Cla05g02052 Cam05g2203 Cec05g2220 Cco05g2263 Clacu05g2195 Cmu05g2061 Cre05g2189 Lsi08g01481 Csa02g01940 Chy07g00142 .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cma17g01203 . 44 232 HSF AT4G17750 59.2 1.7e-60 231.1
Cma05g00089 . 18 243 HSF AT4G17750 51.8 5.0e-60 229.6
Cma19g00021 . 40 269 HSF AT4G17750 50.4 1.8e-57 221.1
Cma14g01746 . 43 225 HSF AT4G17750 59.3 1.2e-56 218.4
Cma02g00053 . 12 110 HSF AT4G17750 71.7 2.6e-40 164.1
Cma05g00178 CCT 20 118 HSF AT4G17750 71.7 8.4e-39 159.1
Cma01g01832 CCT,CST 20 118 HSF AT4G17750 69.7 4.1e-38 156.8
Cma09g00239 CCT,CST 21 118 HSF AT4G17750 69.4 1.6e-37 154.8
Cma06g00639 CST 18 519 HSF AT5G16820 50.1 2.3e-102 370.2
Cma17g01203 . 45 232 HSF AT5G16820 61.8 6.4e-60 229.2
Cma19g00021 . 41 248 HSF AT5G16820 53.3 2.3e-57 220.7
Cma12g00642 CST 41 224 HSF AT5G16820 57.3 4.3e-56 216.5
Cma14g01746 . 44 227 HSF AT5G16820 57.6 8.1e-55 212.2
Cma05g00089 . 43 251 HSF AT5G16820 51.4 1.1e-54 211.8
Cma06g01370 . 41 245 HSF AT5G16820 50.5 1.6e-47 188.0
Cma05g01399 CST 77 264 HSF AT5G16820 52.1 9.0e-46 182.2
Cma07g00159 CCT,ECH 270 452 HSF AT5G16820 52.4 7.6e-45 179.1
Cma02g00053 . 13 112 HSF AT5G16820 78.0 9.6e-40 162.2
Cma16g01175 CST 1 518 HSF AT1G32330 52.7 1.9e-120 430.3
Cma06g00639 CST 13 516 HSF AT1G32330 52.3 1.1e-115 414.5
Cma17g01203 . 33 232 HSF AT1G32330 56.5 1.7e-60 231.1
Cma14g01746 . 20 233 HSF AT1G32330 50.2 1.4e-54 211.5
Cma06g01370 . 25 252 HSF AT1G32330 51.9 7.1e-51 199.1
Cma02g00053 . 11 106 HSF AT1G32330 76.0 2.5e-40 164.1
Cma05g00178 CCT 20 117 HSF AT1G32330 71.4 5.3e-38 156.4
Cma01g01832 CCT,CST 22 117 HSF AT1G32330 71.9 2.0e-37 154.5
Cma17g01203 . 45 232 HSF AT3G02990 62.6 6.2e-60 229.2
Cma14g01746 . 44 254 HSF AT3G02990 54.4 9.0e-59 225.3
Cma05g00089 . 43 243 HSF AT3G02990 53.6 1.9e-56 217.6
Cma12g00642 CST 41 217 HSF AT3G02990 56.0 1.8e-54 211.1
Cma02g00053 . 13 106 HSF AT3G02990 77.7 9.3e-40 162.2
Cma17g01203 . 33 228 HSF AT2G26150 61.7 2.8e-65 246.5
Cma14g01746 . 32 245 HSF AT2G26150 54.6 2.6e-63 240.0
Cma06g00639 CST 8 243 HSF AT2G26150 56.5 8.4e-62 235.0
Cma16g01175 CST 3 243 HSF AT2G26150 55.4 1.2e-60 231.1
Cma05g01399 CST 60 297 HSF AT2G26150 50.4 1.1e-58 224.6
Cma19g00021 . 29 233 HSF AT2G26150 51.0 7.3e-58 221.9
Cma06g01370 . 29 288 HSF AT2G26150 50.8 8.1e-57 218.4
Cma02g00053 . 2 111 HSF AT4G18880 67.3 5.0e-42 169.5
Cma06g01370 . 41 170 HSF AT4G18880 56.0 3.4e-38 156.8
Cma06g01196 CST 3 466 HSF AT4G13980 51.2 3.2e-117 419.5
Cma14g01914 CST 6 422 HSF AT4G13980 51.6 2.7e-103 373.2
Cma02g00053 . 4 111 HSF AT4G13980 65.7 3.0e-38 157.1
Cma17g01203 . 33 229 HSF AT5G43840 51.8 1.1e-51 201.1
Cma14g01746 . 32 224 HSF AT5G43840 52.8 1.6e-50 197.2
Cma12g00642 CST 29 220 HSF AT5G43840 53.1 4.3e-48 189.1
Cma19g00021 . 29 344 HSF AT3G22830 52.7 1.0e-87 321.2
Cma14g01746 . 5 248 HSF AT3G22830 59.6 1.2e-78 291.2
Cma05g00089 . 31 241 HSF AT3G22830 56.4 5.6e-65 245.7
Cma06g00639 CST 9 242 HSF AT3G22830 55.6 2.0e-62 237.3
Cma16g01175 CST 13 242 HSF AT3G22830 55.2 5.8e-62 235.7
Cma05g01399 CST 65 271 HSF AT3G22830 50.2 1.7e-53 207.6
Cma02g00053 . 5 105 HSF AT3G22830 69.3 4.9e-37 152.9
Cma19g00021 . 29 324 HSF AT3G51910 50.3 1.4e-67 253.8
Cma14g01746 . 31 243 HSF AT3G51910 57.9 3.9e-62 235.7
Cma05g00089 . 31 248 HSF AT3G51910 52.0 3.0e-54 209.5
Cma12g00642 CST 29 221 HSF AT3G51910 54.4 2.5e-53 206.5
Cma05g00089 . 20 231 HSF AT3G63350 51.9 4.2e-51 199.1
Cma12g00642 CST 18 228 HSF AT3G63350 50.9 3.0e-49 193.0
Cma17g01203 . 46 234 HSF AT1G67970 51.6 5.3e-46 182.6
Cma03g00981 CST 2 297 HSF AT4G36990 52.7 8.1e-71 264.6
Cma07g00708 CST 2 248 HSF AT4G36990 51.6 2.3e-57 219.9
Cma16g00136 CCT,CST 15 113 HSF AT4G36990 65.7 1.3e-36 151.0
Cma02g01477 . 16 329 HSF AT4G11660 51.2 7.0e-78 288.5
Cma01g01832 CCT,CST 16 119 HSF AT4G11660 74.0 1.0e-44 178.3
Cma05g00178 CCT 16 121 HSF AT4G11660 71.7 2.3e-44 177.2
Cma09g00239 CCT,CST 16 119 HSF AT4G11660 72.1 2.5e-43 173.7
Cma03g00981 CST 2 108 HSF AT4G11660 71.0 1.6e-42 171.0
Cma07g00708 CST 5 102 HSF AT4G11660 69.4 3.2e-38 156.8
Cma16g01175 CST 33 126 HSF AT4G11660 69.1 1.7e-36 151.0
Cma03g00056 . 16 215 HSF AT2G41690 55.0 1.5e-52 203.8
Cma06g00893 . 1251 1450 HSF AT2G41690 51.4 3.5e-46 182.6
Cma01g01832 CCT,CST 1 338 HSF AT1G46264 52.3 1.1e-88 324.3
Cma05g00178 CCT 19 380 HSF AT1G46264 52.3 9.0e-88 321.2
Cma09g00239 CCT,CST 1 332 HSF AT1G46264 52.3 1.1e-85 314.3
Cma11g00891 CCT 5 186 HSF AT1G46264 51.9 4.2e-53 206.1
Cma10g00883 CCT 19 193 HSF AT1G46264 53.6 3.3e-50 196.4
Cma03g00981 CST 4 198 HSF AT1G46264 50.2 6.3e-49 192.2
Cma06g00639 CST 33 138 HSF AT1G46264 72.6 8.2e-41 165.2
Cma16g01175 CST 33 136 HSF AT1G46264 73.1 1.1e-40 164.9
Cma02g00053 . 5 105 HSF AT1G46264 68.3 7.2e-37 152.1
Cma14g01914 CST 6 103 HSF AT1G46264 70.4 9.4e-37 151.8
Cma17g01203 . 36 154 HSF AT1G46264 57.7 1.2e-36 151.4
Cma06g01370 . 32 136 HSF AT1G46264 64.8 2.1e-36 150.6
Cma11g00606 CCT,CST 11 178 HSF AT3G24520 67.3 4.7e-62 235.7
Cma05g01337 CCT 11 181 HSF AT3G24520 64.9 1.4e-61 234.2
Cma17g01203 . 44 232 HSF AT4G17750 59.2 1.7e-60 231.1
Cma05g00089 . 18 243 HSF AT4G17750 51.8 5.0e-60 229.6
Cma19g00021 . 40 269 HSF AT4G17750 50.4 1.8e-57 221.1
Cma14g01746 . 43 225 HSF AT4G17750 59.3 1.2e-56 218.4
Cma02g00053 . 12 110 HSF AT4G17750 71.7 2.6e-40 164.1
Cma05g00178 CCT 20 118 HSF AT4G17750 71.7 8.4e-39 159.1
Cma01g01832 CCT,CST 20 118 HSF AT4G17750 69.7 4.1e-38 156.8
Cma09g00239 CCT,CST 21 118 HSF AT4G17750 69.4 1.6e-37 154.8
Cma06g00639 CST 18 519 HSF AT5G16820 50.1 2.3e-102 370.2
Cma17g01203 . 45 232 HSF AT5G16820 61.8 6.4e-60 229.2
Cma19g00021 . 41 248 HSF AT5G16820 53.3 2.3e-57 220.7
Cma12g00642 CST 41 224 HSF AT5G16820 57.3 4.3e-56 216.5
Cma14g01746 . 44 227 HSF AT5G16820 57.6 8.1e-55 212.2
Cma05g00089 . 43 251 HSF AT5G16820 51.4 1.1e-54 211.8
Cma06g01370 . 41 245 HSF AT5G16820 50.5 1.6e-47 188.0
Cma05g01399 CST 77 264 HSF AT5G16820 52.1 9.0e-46 182.2
Cma07g00159 CCT,ECH 270 452 HSF AT5G16820 52.4 7.6e-45 179.1
Cma02g00053 . 13 112 HSF AT5G16820 78.0 9.6e-40 162.2
Cma16g01175 CST 1 518 HSF AT1G32330 52.7 1.9e-120 430.3
Cma06g00639 CST 13 516 HSF AT1G32330 52.3 1.1e-115 414.5
Cma17g01203 . 33 232 HSF AT1G32330 56.5 1.7e-60 231.1
Cma14g01746 . 20 233 HSF AT1G32330 50.2 1.4e-54 211.5
Cma06g01370 . 25 252 HSF AT1G32330 51.9 7.1e-51 199.1
Cma02g00053 . 11 106 HSF AT1G32330 76.0 2.5e-40 164.1
Cma05g00178 CCT 20 117 HSF AT1G32330 71.4 5.3e-38 156.4
Cma01g01832 CCT,CST 22 117 HSF AT1G32330 71.9 2.0e-37 154.5
Cma17g01203 . 45 232 HSF AT3G02990 62.6 6.2e-60 229.2
Cma14g01746 . 44 254 HSF AT3G02990 54.4 9.0e-59 225.3
Cma05g00089 . 43 243 HSF AT3G02990 53.6 1.9e-56 217.6
Cma12g00642 CST 41 217 HSF AT3G02990 56.0 1.8e-54 211.1
Cma02g00053 . 13 106 HSF AT3G02990 77.7 9.3e-40 162.2
Cma17g01203 . 33 228 HSF AT2G26150 61.7 2.8e-65 246.5
Cma14g01746 . 32 245 HSF AT2G26150 54.6 2.6e-63 240.0
Cma06g00639 CST 8 243 HSF AT2G26150 56.5 8.4e-62 235.0
Cma16g01175 CST 3 243 HSF AT2G26150 55.4 1.2e-60 231.1
Cma05g01399 CST 60 297 HSF AT2G26150 50.4 1.1e-58 224.6
Cma19g00021 . 29 233 HSF AT2G26150 51.0 7.3e-58 221.9
Cma06g01370 . 29 288 HSF AT2G26150 50.8 8.1e-57 218.4
Cma02g00053 . 2 111 HSF AT4G18880 67.3 5.0e-42 169.5
Cma06g01370 . 41 170 HSF AT4G18880 56.0 3.4e-38 156.8
Cma06g01196 CST 3 466 HSF AT4G13980 51.2 3.2e-117 419.5
Cma14g01914 CST 6 422 HSF AT4G13980 51.6 2.7e-103 373.2
Cma02g00053 . 4 111 HSF AT4G13980 65.7 3.0e-38 157.1
Cma17g01203 . 33 229 HSF AT5G43840 51.8 1.1e-51 201.1
Cma14g01746 . 32 224 HSF AT5G43840 52.8 1.6e-50 197.2
Cma12g00642 CST 29 220 HSF AT5G43840 53.1 4.3e-48 189.1
Cma19g00021 . 29 344 HSF AT3G22830 52.7 1.0e-87 321.2
Cma14g01746 . 5 248 HSF AT3G22830 59.6 1.2e-78 291.2
Cma05g00089 . 31 241 HSF AT3G22830 56.4 5.6e-65 245.7
Cma06g00639 CST 9 242 HSF AT3G22830 55.6 2.0e-62 237.3
Cma16g01175 CST 13 242 HSF AT3G22830 55.2 5.8e-62 235.7
Cma05g01399 CST 65 271 HSF AT3G22830 50.2 1.7e-53 207.6
Cma02g00053 . 5 105 HSF AT3G22830 69.3 4.9e-37 152.9
Cma19g00021 . 29 324 HSF AT3G51910 50.3 1.4e-67 253.8
Cma14g01746 . 31 243 HSF AT3G51910 57.9 3.9e-62 235.7
Cma05g00089 . 31 248 HSF AT3G51910 52.0 3.0e-54 209.5
Cma12g00642 CST 29 221 HSF AT3G51910 54.4 2.5e-53 206.5
Cma05g00089 . 20 231 HSF AT3G63350 51.9 4.2e-51 199.1
Cma12g00642 CST 18 228 HSF AT3G63350 50.9 3.0e-49 193.0
Cma17g01203 . 46 234 HSF AT1G67970 51.6 5.3e-46 182.6
Cma03g00981 CST 2 297 HSF AT4G36990 52.7 8.1e-71 264.6
Cma07g00708 CST 2 248 HSF AT4G36990 51.6 2.3e-57 219.9
Cma16g00136 CCT,CST 15 113 HSF AT4G36990 65.7 1.3e-36 151.0
Cma02g01477 . 16 329 HSF AT4G11660 51.2 7.0e-78 288.5
Cma01g01832 CCT,CST 16 119 HSF AT4G11660 74.0 1.0e-44 178.3
Cma05g00178 CCT 16 121 HSF AT4G11660 71.7 2.3e-44 177.2
Cma09g00239 CCT,CST 16 119 HSF AT4G11660 72.1 2.5e-43 173.7
Cma03g00981 CST 2 108 HSF AT4G11660 71.0 1.6e-42 171.0
Cma07g00708 CST 5 102 HSF AT4G11660 69.4 3.2e-38 156.8
Cma16g01175 CST 33 126 HSF AT4G11660 69.1 1.7e-36 151.0
Cma03g00056 . 16 215 HSF AT2G41690 55.0 1.5e-52 203.8
Cma06g00893 . 1251 1450 HSF AT2G41690 51.4 3.5e-46 182.6
Cma01g01832 CCT,CST 1 338 HSF AT1G46264 52.3 1.1e-88 324.3
Cma05g00178 CCT 19 380 HSF AT1G46264 52.3 9.0e-88 321.2
Cma09g00239 CCT,CST 1 332 HSF AT1G46264 52.3 1.1e-85 314.3
Cma11g00891 CCT 5 186 HSF AT1G46264 51.9 4.2e-53 206.1
Cma10g00883 CCT 19 193 HSF AT1G46264 53.6 3.3e-50 196.4
Cma03g00981 CST 4 198 HSF AT1G46264 50.2 6.3e-49 192.2
Cma06g00639 CST 33 138 HSF AT1G46264 72.6 8.2e-41 165.2
Cma16g01175 CST 33 136 HSF AT1G46264 73.1 1.1e-40 164.9
Cma02g00053 . 5 105 HSF AT1G46264 68.3 7.2e-37 152.1
Cma14g01914 CST 6 103 HSF AT1G46264 70.4 9.4e-37 151.8
Cma17g01203 . 36 154 HSF AT1G46264 57.7 1.2e-36 151.4
Cma06g01370 . 32 136 HSF AT1G46264 64.8 2.1e-36 150.6
Cma11g00606 CCT,CST 11 178 HSF AT3G24520 67.3 4.7e-62 235.7
Cma05g01337 CCT 11 181 HSF AT3G24520 64.9 1.4e-61 234.2
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002351 3 2 1 1 3 2 2 1 2 2 2 2 3 2 2 3 2 2 3 1 2 2 2 2 2 2 2 3 3 1 62
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
34373 PF00447 HSF_DNA-bind 3.30E-32 CL0123 Cma TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cma01g01832 Cma_Chr01 FPKM 8.196546 9.130425 14.149418 14.315486 6.654906 6.909329 6.351835 2.837161 2.828131 2.957144