Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma01g01840 | ATGTTGGCTAGCCCCGAGGCGGCGAGGTTCGTGCTGGTTACACAGGCTCATTTGTTTAAGCCTACTTACCCCAAAAGCAAAGAGCGTTTGATCGGCCCATCTGCCTTGTTTTATCACCAAGGCGACTACCATTGCCGCCTTAGGAAACTGGTTCAGAACTCTCTTTCTTTGGACGTCATCCGGAGCCTGGTCCCCGATATCGACTCCGTAACCACCTCCGCTCTCCACTCCTGGACCGGTACCCAGCTTATCAACACTTTTCATGAAATGAAAAAGATATCCTTTGAAGTTGGGATATTGGCCATTTTTGGGCATTTAGAAGCTGCTTACAAAGAGGACCTGAAAAAAAACTACAGCATTTTGGACGCAGGCTACAATTCTTTCCCCACCAACATTCCTGGAACTCCATACAAAAAGGCACTCTCAGCTAGAAAGCGGCTAAGTAAAATCTTAGGTGATATAATCCACGAAAGGAGGGAGAAGAAGGTGGGCAAGAAGGATCTTTTGGGGTGGTTTCTGAACTCCATAGATGAAGAAGGTGAAGCTATGAGCGATGCCCAAATAGAAGATAACATAATTGGGGTGCTTTTTGCGGCTCAAGACACCACAGCCAGTGTCATGACTTGGGTCGTCAAGTACCTTTATGACCAACCCAAGCTTCTTCAAACGCTAAAGAAAGAGCAAGAGGAAATTTTAGAGTTCAATTGCCAAAAAAATCAACAGTTGAATTGGGTTCAGACAAGAAACATGCCCATGAGTTATAAGGTAGTATTGGAGAGCTTAAGGATGGCGAGCATTATATCATTCACATTCAGGGAGGCTGTAGCTGACGTGGAATACAAAGGGTACTTGATTCCAAAAGGTTGGAAGGTGATGCCTTTGTTTCGAAACATCCATCGCAGCCCAGAATATTTTGCCGATCCTCACAAATTCGACCCTTCTAGATTTGAGGTTGCACCGAAACCCAATACGTTCATGCCATTTGGCAGTGGAGTTCATGCCTGCCCAGGGAATGAGCTTGCCAAGCTGGAGATCTTGATCCTGATTCATCATCTAGTCACCAAATTCAGGTGGGAATTAGTTGGTTCGCAAAACGGGGTTCAGCATAGTCCATTTCCTGTTCCCTTTCAAGGCCTTCCAGCACGATTTTGGAATATAGCCCACCAGAAGACCGTACATACCAAAATGGACCCGAACTAA | 1200 | 45.67 | MLASPEAARFVLVTQAHLFKPTYPKSKERLIGPSALFYHQGDYHCRLRKLVQNSLSLDVIRSLVPDIDSVTTSALHSWTGTQLINTFHEMKKISFEVGILAIFGHLEAAYKEDLKKNYSILDAGYNSFPTNIPGTPYKKALSARKRLSKILGDIIHERREKKVGKKDLLGWFLNSIDEEGEAMSDAQIEDNIIGVLFAAQDTTASVMTWVVKYLYDQPKLLQTLKKEQEEILEFNCQKNQQLNWVQTRNMPMSYKVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVMPLFRNIHRSPEYFADPHKFDPSRFEVAPKPNTFMPFGSGVHACPGNELAKLEILILIHHLVTKFRWELVGSQNGVQHSPFPVPFQGLPARFWNIAHQKTVHTKMDPN | 399 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 12161356 | 12164361 | + | CmaCh01G018400.1 | Cma01g01840 | 287533 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma01g01840 | 399 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 328 | 337 | IPR017972 | GO:0005506|GO:0016705 | |
Cma01g01840 | 399 | SUPERFAMILY | Cytochrome P450 | 2 | 383 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g01840 | 399 | Gene3D | Cytochrome P450 | 1 | 385 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g01840 | 399 | PRINTS | E-class P450 group I signature | 254 | 272 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g01840 | 399 | PRINTS | E-class P450 group I signature | 335 | 358 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g01840 | 399 | PRINTS | E-class P450 group I signature | 207 | 233 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g01840 | 399 | PRINTS | E-class P450 group I signature | 325 | 335 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g01840 | 399 | PRINTS | E-class P450 group I signature | 187 | 204 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g01840 | 399 | PRINTS | E-class P450 group I signature | 294 | 318 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g01840 | 399 | PANTHER | CYTOCHROME P450 26 | 1 | 384 | - | - | |
Cma01g01840 | 399 | PANTHER | CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE | 1 | 384 | - | - | |
Cma01g01840 | 399 | Pfam | Cytochrome P450 | 2 | 361 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g01840 | 399 | PRINTS | P450 superfamily signature | 335 | 346 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g01840 | 399 | PRINTS | P450 superfamily signature | 255 | 266 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g01840 | 399 | PRINTS | P450 superfamily signature | 326 | 335 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g01840 | 399 | PRINTS | P450 superfamily signature | 198 | 215 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma01g01840 | Cma05g00186 | CCT | |
Cma01g01840 | Cma05g00186 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma01g01840 | Cma-Chr1:12161356 | Cma16g00505 | Cma-Chr16:2597830 | 7.80E-168 | dispersed | |
Cma01g01840 | Cma-Chr1:12161356 | Cma11g01752 | Cma-Chr11:11648636 | 0 | wgd | |
Cma01g01840 | Cma-Chr1:12161356 | Cma19g00605 | Cma-Chr19:6623302 | 6.30E-155 | wgd | |
Cma01g01840 | Cma-Chr1:12161356 | Cma05g00186 | Cma-Chr5:803874 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma01g01840 | K09843 | - | csv:101213916 | 686.026 |