Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma01g01840 ATGTTGGCTAGCCCCGAGGCGGCGAGGTTCGTGCTGGTTACACAGGCTCATTTGTTTAAGCCTACTTACCCCAAAAGCAAAGAGCGTTTGATCGGCCCATCTGCCTTGTTTTATCACCAAGGCGACTACCATTGCCGCCTTAGGAAACTGGTTCAGAACTCTCTTTCTTTGGACGTCATCCGGAGCCTGGTCCCCGATATCGACTCCGTAACCACCTCCGCTCTCCACTCCTGGACCGGTACCCAGCTTATCAACACTTTTCATGAAATGAAAAAGATATCCTTTGAAGTTGGGATATTGGCCATTTTTGGGCATTTAGAAGCTGCTTACAAAGAGGACCTGAAAAAAAACTACAGCATTTTGGACGCAGGCTACAATTCTTTCCCCACCAACATTCCTGGAACTCCATACAAAAAGGCACTCTCAGCTAGAAAGCGGCTAAGTAAAATCTTAGGTGATATAATCCACGAAAGGAGGGAGAAGAAGGTGGGCAAGAAGGATCTTTTGGGGTGGTTTCTGAACTCCATAGATGAAGAAGGTGAAGCTATGAGCGATGCCCAAATAGAAGATAACATAATTGGGGTGCTTTTTGCGGCTCAAGACACCACAGCCAGTGTCATGACTTGGGTCGTCAAGTACCTTTATGACCAACCCAAGCTTCTTCAAACGCTAAAGAAAGAGCAAGAGGAAATTTTAGAGTTCAATTGCCAAAAAAATCAACAGTTGAATTGGGTTCAGACAAGAAACATGCCCATGAGTTATAAGGTAGTATTGGAGAGCTTAAGGATGGCGAGCATTATATCATTCACATTCAGGGAGGCTGTAGCTGACGTGGAATACAAAGGGTACTTGATTCCAAAAGGTTGGAAGGTGATGCCTTTGTTTCGAAACATCCATCGCAGCCCAGAATATTTTGCCGATCCTCACAAATTCGACCCTTCTAGATTTGAGGTTGCACCGAAACCCAATACGTTCATGCCATTTGGCAGTGGAGTTCATGCCTGCCCAGGGAATGAGCTTGCCAAGCTGGAGATCTTGATCCTGATTCATCATCTAGTCACCAAATTCAGGTGGGAATTAGTTGGTTCGCAAAACGGGGTTCAGCATAGTCCATTTCCTGTTCCCTTTCAAGGCCTTCCAGCACGATTTTGGAATATAGCCCACCAGAAGACCGTACATACCAAAATGGACCCGAACTAA 1200 45.67 MLASPEAARFVLVTQAHLFKPTYPKSKERLIGPSALFYHQGDYHCRLRKLVQNSLSLDVIRSLVPDIDSVTTSALHSWTGTQLINTFHEMKKISFEVGILAIFGHLEAAYKEDLKKNYSILDAGYNSFPTNIPGTPYKKALSARKRLSKILGDIIHERREKKVGKKDLLGWFLNSIDEEGEAMSDAQIEDNIIGVLFAAQDTTASVMTWVVKYLYDQPKLLQTLKKEQEEILEFNCQKNQQLNWVQTRNMPMSYKVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVMPLFRNIHRSPEYFADPHKFDPSRFEVAPKPNTFMPFGSGVHACPGNELAKLEILILIHHLVTKFRWELVGSQNGVQHSPFPVPFQGLPARFWNIAHQKTVHTKMDPN 399
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 12161356 12164361 + CmaCh01G018400.1 Cma01g01840 287533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma01g01840 399 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 328 337 IPR017972 GO:0005506|GO:0016705
Cma01g01840 399 SUPERFAMILY Cytochrome P450 2 383 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01840 399 Gene3D Cytochrome P450 1 385 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01840 399 PRINTS E-class P450 group I signature 254 272 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01840 399 PRINTS E-class P450 group I signature 335 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01840 399 PRINTS E-class P450 group I signature 207 233 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01840 399 PRINTS E-class P450 group I signature 325 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01840 399 PRINTS E-class P450 group I signature 187 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01840 399 PRINTS E-class P450 group I signature 294 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01840 399 PANTHER CYTOCHROME P450 26 1 384 - -
Cma01g01840 399 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 1 384 - -
Cma01g01840 399 Pfam Cytochrome P450 2 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01840 399 PRINTS P450 superfamily signature 335 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01840 399 PRINTS P450 superfamily signature 255 266 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01840 399 PRINTS P450 superfamily signature 326 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01840 399 PRINTS P450 superfamily signature 198 215 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma01g01840 Cma05g00186 CCT
Cma01g01840 Cma05g00186 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g01840 Cma-Chr1:12161356 Cma16g00505 Cma-Chr16:2597830 7.80E-168 dispersed
Cma01g01840 Cma-Chr1:12161356 Cma11g01752 Cma-Chr11:11648636 0 wgd
Cma01g01840 Cma-Chr1:12161356 Cma19g00605 Cma-Chr19:6623302 6.30E-155 wgd
Cma01g01840 Cma-Chr1:12161356 Cma05g00186 Cma-Chr5:803874 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma01g01840 K09843 - csv:101213916 686.026