Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma01g01873 ATGGCGGTCGCTACTGATCCGCTCGGCTGCATGCAAAAACTCGTCCAGATGCTTCAGGCTCCGCCGTATGTCGCGGCCGCCGTTCTGGGTGGTGTGTTGCTTCTGACGTTTTTCATCGGAGATTGGAGAAAGAGACGTCGGAGTCCTCTACCTCTGTTGCCGGCGATTCCGGGGATACCGGTGCTGGGGAATCTGTTGCAGTTGAAGGAGAAGAAGCCGCACAAAACGTTTGCTCAGTGGTCCGAGACGTATGGTCCGATTTATTCCATAAAAGCCGGCGCCTCCACTGTGATCGTTCTCAACTCCTCCGATCTCGCCAAAGAGGCTATGGTGACGAGGTACTCTTCCATTTCCAGTAGAAAACTAAGCAAAGCCCTCACTATCTTGACTGCTGATAAATGCATGGTTGCTATGAGCGATTACAATGACTTTCATAAGCTGGTTAAGAGATACATATTGGCTAATGTCTTGGGGGCTAACGCTCAGAAAAGACTCAGACAAAGGAGAGACACCATGATAGACAATATTTCCAGAGAATTGTTTGCTTGTGTGAAGGATTCTTCATCAGAATCTGTTAATTTCCGAAAGATCTTTGAATCGGAACTCTTCGGGCTGGCGCTTAAAGAAACGTTTGGGAGGGATATGGAGTCGTTATATGTCGATGGGCTCGGTACTACGTTGCTGAGAGAAGATCTGTTCAGAACTTTAGTGATTGATCCGATGGAGGGTGCGATCGAGGTTGATTGGAGAGATTTCTTCCCATATCTGAGATGGATTCCCAACAAGGGTGTGGAGGATAGGATCAGGAAGATGGACTTTCGCAGGCGAGTGACGATGAAGAGCCTCATGGAGGAGAAGAAGAAGCAAATTGCAGCTGGGGAGGATTTGAATTGCTATTCTGAGTTCTTGTTATCTGAAGCAAAATCGCTCACAGAGGAACAGATATCCATGTTGCTCTGGGAGATAATCATTGAAACCTCAGACACTACTCTGGTTGAGCGTCTATATCAGCATATACAAAGTGTGTGTGGATCTGCAAAGATTACTGAAGAAAACCTGTCACAGCTCCCATATTTGACTGCCGTTTTTCACGAAACTCTTCGGAAGTACAGTCCAGTCTCGATTGTTCCATTGCGATATGCACATGAAGATACCCAGTTAGGGGGGTACTTTATTCCTGCAGGGAGTGAGGTTGCTGTCAACATTTACGCCTGCAACATGGACAAGAAACAATGGGAAAGCCCTGAGGAATGGAAACCAGAGAGGTTTCTTGATGAGAGCTATGATCCAATGGACCTGTACAAAACCATGGCGTTCGGAGGCGGGAAGAGGGTGTGTGCAGGTGCCCCCAAGGCAATGCTGATAGCTTGCACTACCCTTGGAAGGCTGGTTCAAGGGTTCACTTGGAAGCTGAGGGAAGGAGAAGAAGACAAGGTCGACACTCTCGGCCTCACTGCTCGCAAGCTCCAACCACTGCATATCGTCGCCAAACCGAGAATCAACTAA 1506 48.07 MAVATDPLGCMQKLVQMLQAPPYVAAAVLGGVLLLTFFIGDWRKRRRSPLPLLPAIPGIPVLGNLLQLKEKKPHKTFAQWSETYGPIYSIKAGASTVIVLNSSDLAKEAMVTRYSSISSRKLSKALTILTADKCMVAMSDYNDFHKLVKRYILANVLGANAQKRLRQRRDTMIDNISRELFACVKDSSSESVNFRKIFESELFGLALKETFGRDMESLYVDGLGTTLLREDLFRTLVIDPMEGAIEVDWRDFFPYLRWIPNKGVEDRIRKMDFRRRVTMKSLMEEKKKQIAAGEDLNCYSEFLLSEAKSLTEEQISMLLWEIIIETSDTTLVERLYQHIQSVCGSAKITEENLSQLPYLTAVFHETLRKYSPVSIVPLRYAHEDTQLGGYFIPAGSEVAVNIYACNMDKKQWESPEEWKPERFLDESYDPMDLYKTMAFGGGKRVCAGAPKAMLIACTTLGRLVQGFTWKLREGEEDKVDTLGLTARKLQPLHIVAKPRIN 501
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 12287289 12290572 - CmaCh01G018730.1 Cma01g01873 287566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma01g01873 501 PANTHER ENT-KAURENE OXIDASE, CHLOROPLASTIC 26 499 IPR044225 GO:0005506|GO:0009686|GO:0010241|GO:0020037|GO:0052615
Cma01g01873 501 Pfam Cytochrome P450 57 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01873 501 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01873 501 PRINTS E-class P450 group I signature 81 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01873 501 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01873 501 PRINTS E-class P450 group I signature 105 126 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01873 501 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01873 501 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01873 501 SUPERFAMILY Cytochrome P450 45 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01873 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Cma01g01873 501 Gene3D Cytochrome P450 38 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma01g01873 Cma09g00201 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g01873 Cma-Chr1:12287289 Cma14g00501 Cma-Chr14:2445850 3.28E-49 dispersed
Cma01g01873 Cma-Chr1:12287289 Cma09g00201 Cma-Chr9:832133 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma01g01873 K04122 - csv:101209283 783.867