Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma01g01881 | ATGAGAGAGATGGAACTTCCTCACACCTCCTCATCGGCCGCCGTCGCCGGAATCTTCACCCTTCTCATCTTCCTCTATGCCCTCTTCAACATATCTACAAAACTCAGCTCTAATCCAAAAAGACTCCCACCGGAACCCGCCGGAGCTTGGCCGGTGATCGGCCACCTCCATCTACTAAGCACAACAGAGCCAGCCCACATAACGTTGGCCAAAATGGCGGATGTGTACGGACCAATCTTTACACTGAAGTTGGGCATGCACAGAACCTTGATTGTAAGCAGCTGGGAGATAGCCAGGGAATGTTTCACGACAAAAGACAGAATCTTTGCCTCTCGACCAAAGCTTGTCGCCTCAAAGCTGCTTGGTTATAACTATGCCATGATGGGGTTGAGCCCCTATGGCTCGCACTGGCGCCATGTTCGTAAAATGGCCACCCTCGAGCTCTTCACGAACCACCGCCTGCAGCAGCTCCAACACGTTAGGGTATCGGAGGTTGAAAGTTCGATTAAGAAGCTGTATGAGTTATGTGGCAATGGAAAGGAGAAAGCTTTGGTGGATATGAAGACGTGGTTTGGTGATATTACTCTCAATACCATATTCAGAGTAGTGGTCGGAAAACGATTCTCGACGGCGGTGGAGGGTGGCGGTAATGAAGAGTATCGGAAGGCGTTGAGGGAATTCTTTGAATGGTTTGGAGTGTTTGTTCCTTCGGATTCATTTCCGTTTCTTAAATGGTTGGATTTGGGAGGACATGAGAAGGCCATGAAGAAGACGGCGGAGGTTTTGGATGAAGTGTTGGATAAATGGGTGGAAGAGCGTCGGAAAATGAGAGCTTCCGATGAAGCGAAGACGGCGGAGCATGATTTCATGGATGTCATGCTTTCTGGTGTTAAAGATTATGAAGAACTTTCGAGCTATGAGGCTAATACCGTAATCAAATCCACGTGTTTGGCACTTATATTGGCGGGTTCGGATACGACGACAGTTACAATGGTATGGGCTCTTTCTTTACTACTCAACAATCCTGAAGCACTTAAGAAAGCTCAACTTGAATTAGATGAACACGTTGGGAGAGAAACACACCTGAAAGAATCCGACGTGAAAAATCTTGTATATCTCCAAGCAATTGTGAAGGAAACATTACGTTTGTATCCTGCTGGGCCACTTGGCATCCCTCATGAATCTATAGAGGATTGTACTATTAATGACTACCATATTCCGGCGGGGACACGTTTGATGGTAAACATTCAGAAACTTCAAAGAGACCCACAAGTATGGGAAGATCCTAGTGAATTTCGACCAGAGAGATTTTTAACAAGTCACAGAGATTTCAATTTTAGAGGACAAACTCCTGAGTTTATACCCTTTGGAAACGGAAGAAGGATGTGTCCTGGAATCTCATTTGCCCTTCAAATTATGCATTTAACGCTCGCAAATTTGCTTCATGAGTTTGAAATTGATAGGCCATCTAAAGAGTTATTGAATATGGAAGAAAGCGCTGGTATGACGAGTATTAGAAAGGATCCACTCGAGGTGGTTTTAAGGCCACGTCTCCGTCTTTGA | 1563 | 45.55 | MREMELPHTSSSAAVAGIFTLLIFLYALFNISTKLSSNPKRLPPEPAGAWPVIGHLHLLSTTEPAHITLAKMADVYGPIFTLKLGMHRTLIVSSWEIARECFTTKDRIFASRPKLVASKLLGYNYAMMGLSPYGSHWRHVRKMATLELFTNHRLQQLQHVRVSEVESSIKKLYELCGNGKEKALVDMKTWFGDITLNTIFRVVVGKRFSTAVEGGGNEEYRKALREFFEWFGVFVPSDSFPFLKWLDLGGHEKAMKKTAEVLDEVLDKWVEERRKMRASDEAKTAEHDFMDVMLSGVKDYEELSSYEANTVIKSTCLALILAGSDTTTVTMVWALSLLLNNPEALKKAQLELDEHVGRETHLKESDVKNLVYLQAIVKETLRLYPAGPLGIPHESIEDCTINDYHIPAGTRLMVNIQKLQRDPQVWEDPSEFRPERFLTSHRDFNFRGQTPEFIPFGNGRRMCPGISFALQIMHLTLANLLHEFEIDRPSKELLNMEESAGMTSIRKDPLEVVLRPRLRL | 520 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 12325303 | 12327266 | + | CmaCh01G018810.1 | Cma01g01881 | 287574 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma01g01881 | 520 | PRINTS | P450 superfamily signature | 322 | 339 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g01881 | 520 | PRINTS | P450 superfamily signature | 375 | 386 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g01881 | 520 | PRINTS | P450 superfamily signature | 454 | 463 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g01881 | 520 | PRINTS | P450 superfamily signature | 463 | 474 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g01881 | 520 | Pfam | Cytochrome P450 | 44 | 506 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g01881 | 520 | PRINTS | E-class P450 group I signature | 73 | 92 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g01881 | 520 | PRINTS | E-class P450 group I signature | 97 | 118 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g01881 | 520 | PRINTS | E-class P450 group I signature | 194 | 212 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g01881 | 520 | PRINTS | E-class P450 group I signature | 311 | 328 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g01881 | 520 | PRINTS | E-class P450 group I signature | 331 | 357 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g01881 | 520 | PRINTS | E-class P450 group I signature | 374 | 392 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g01881 | 520 | PRINTS | E-class P450 group I signature | 415 | 439 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g01881 | 520 | PRINTS | E-class P450 group I signature | 453 | 463 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g01881 | 520 | PRINTS | E-class P450 group I signature | 463 | 486 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g01881 | 520 | PANTHER | CYTOCHROME P450 82C3-RELATED | 40 | 519 | - | - | |
Cma01g01881 | 520 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 456 | 465 | IPR017972 | GO:0005506|GO:0016705 | |
Cma01g01881 | 520 | Gene3D | Cytochrome P450 | 28 | 515 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma01g01881 | 520 | PANTHER | CYTOCHROME P450 | 40 | 519 | - | - | |
Cma01g01881 | 520 | SUPERFAMILY | Cytochrome P450 | 43 | 517 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma01g01881 | Cma09g00189 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma01g01879 | Cma-Chr1:12314351 | Cma01g01881 | Cma-Chr1:12325303 | 0 | dispersed | |
Cma01g01881 | Cma-Chr1:12325303 | Cma09g00189 | Cma-Chr9:786089 | 0 | dispersed | |
Cma09g00192 | Cma-Chr9:799666 | Cma01g01881 | Cma-Chr1:12325303 | 1.10E-143 | dispersed | |
Cma09g00193 | Cma-Chr9:807064 | Cma01g01881 | Cma-Chr1:12325303 | 2.04E-163 | dispersed | |
Cma01g01880 | Cma-Chr1:12321737 | Cma01g01881 | Cma-Chr1:12325303 | 0 | tandem | |
Cma01g01881 | Cma-Chr1:12325303 | Cma01g01882 | Cma-Chr1:12328508 | 1.03E-72 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma01g01881 | - | - | csv:101208335 | 768.074 |