Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma01g02011 | ATGGCTGGATCGGATGAGAACAACCCGGATGTGACCGGACGAGCAAATCTCCATGGGAGTTTACGAGTTGATGGCGGTGGCAAATTTATAGTGGGGGCGGGTCAAAACCGCAGAGCTTTGAGCAACATTAATGGCAATGTTAGAGGAGCTCCTCCTCCCCTTCATCCCTGTGCAGTCCTCAAAAGAGGCTTAACAGAAACTGATGCTGTTCTCAACTGTAAAGTTCCTCCCATTCCGATCCATCGACCGATTACTCGGAAGTTTGCAGCTCAGCTGGCCGACAAGCAGCAGCAACCTCTGCCTGAGGTTGATAGAAAGCCATTACAATCTTCTCCAACTCGAAAAGACTCAATAGATCATCACCCCATCACAGAGGAAGATGATTCTATGGACGAATCGGCAGTACCGATGTTCGTTCAACACACAAAAGCGATGTTGGATGAAATTGACAAAATGGAAGAGGTGGAAATGGAAGATATAGAAGAAGAGCCAGTCATGGACATAGACAGCTGCGATAAGAAGAACCAGCTAGCTGTTGTGGAATACATTGATGACTTGTATGCTTGCTACAGGAGAGCCGAGGTTTCTGGCTGTGTCCCACCAAACTACATGGCTCAGCAAGCAGATATTAACGAGAGGATGAGAGGGATTCTCATTGACTGGCTAATTGAGGTACACTACAAGTTTGAGCTGATGGAGGAGACATTGTACCTCACAATCAACCTGATCGATAGATTCTTGGCGGTTCAGTCGGTGGTGAGGAAGAAGCTCCAGCTTGTTGGAGTGACGGCGATGCTTATTGCCTGCAAGTACGAGGAGGTTTCTGTTCCTATTGTGGATGATCTTATTCTCATATCTGACAAGGCCTACAGCCGAAAAGAAATTTTGGACATGGAGAAGCTGATGGTAAACACCTTACAGTTCAATCTGTCTGTTCCAACACTTTATGTGTTCATGAGAAGGTTTCTCAAAGCTGCCCAATCTGATAGAGAGCTGGAGCTGCTGTCATTCTTCATGGTGGAGCTCTGTCTAGTGGAATATGAAATGCTGAAGTATAAACCTTCATTAATGGCTGCTGCTGCGGTCTTCACTGCTCAATGCACCATCAATGGCTTCAAGGAATGGAGCAAAACCAGTGAGTGGCACACTGGGTATTCTCAGGAGCAGCTTCTGGAATGTTCACGTTTGATGGTGGAGTTTCACGAGAAAGCAGGGACAGGAAAATTGACGGGAGTTCACAGGAAGTATAGCACATCCAAGTTCGGATATGCTGCAAGAAGTGAACCAGCAAGCTTTCTGTTGGAAGAAGAAAGGCCATAG | 1320 | 46.52 | MAGSDENNPDVTGRANLHGSLRVDGGGKFIVGAGQNRRALSNINGNVRGAPPPLHPCAVLKRGLTETDAVLNCKVPPIPIHRPITRKFAAQLADKQQQPLPEVDRKPLQSSPTRKDSIDHHPITEEDDSMDESAVPMFVQHTKAMLDEIDKMEEVEMEDIEEEPVMDIDSCDKKNQLAVVEYIDDLYACYRRAEVSGCVPPNYMAQQADINERMRGILIDWLIEVHYKFELMEETLYLTINLIDRFLAVQSVVRKKLQLVGVTAMLIACKYEEVSVPIVDDLILISDKAYSRKEILDMEKLMVNTLQFNLSVPTLYVFMRRFLKAAQSDRELELLSFFMVELCLVEYEMLKYKPSLMAAAAVFTAQCTINGFKEWSKTSEWHTGYSQEQLLECSRLMVEFHEKAGTGKLTGVHRKYSTSKFGYAARSEPASFLLEEERP | 439 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 12878049 | 12881213 | - | CmaCh01G020110.1 | Cma01g02011 | 287704 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma01g02011 | 439 | PANTHER | CYCLINS | 25 | 431 | IPR039361 | - | |
Cma01g02011 | 439 | Gene3D | - | 199 | 311 | - | - | |
Cma01g02011 | 439 | PANTHER | CYCLIN-B2-3-RELATED | 25 | 431 | - | - | |
Cma01g02011 | 439 | Pfam | Cyclin, C-terminal domain | 313 | 427 | IPR004367 | - | |
Cma01g02011 | 439 | SUPERFAMILY | Cyclin-like | 312 | 430 | IPR036915 | - | |
Cma01g02011 | 439 | SMART | Cyclin_C_2 | 313 | 430 | IPR004367 | - | |
Cma01g02011 | 439 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Cma01g02011 | 439 | Gene3D | - | 185 | 424 | - | - | |
Cma01g02011 | 439 | CDD | CYCLIN | 311 | 398 | IPR013763 | - | |
Cma01g02011 | 439 | Pfam | Cyclin, N-terminal domain | 186 | 311 | IPR006671 | - | |
Cma01g02011 | 439 | MobiDBLite | consensus disorder prediction | 108 | 128 | - | - | |
Cma01g02011 | 439 | CDD | CYCLIN | 214 | 303 | IPR013763 | - | |
Cma01g02011 | 439 | ProSitePatterns | Cyclins signature. | 215 | 246 | IPR006671 | - | |
Cma01g02011 | 439 | SUPERFAMILY | Cyclin-like | 174 | 310 | IPR036915 | - | |
Cma01g02011 | 439 | SMART | cyclin_7 | 317 | 399 | IPR013763 | - | |
Cma01g02011 | 439 | SMART | cyclin_7 | 220 | 304 | IPR013763 | - | |
Cma01g02011 | 439 | MobiDBLite | consensus disorder prediction | 92 | 132 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma01g02011 | Cma-Chr1:12878049 | Cma07g01100 | Cma-Chr7:5953674 | 1.06E-82 | dispersed | |
Cma02g01292 | Cma-Chr2:7574896 | Cma01g02011 | Cma-Chr1:12878049 | 7.48E-86 | transposed | |
Cma19g01118 | Cma-Chr19:9188299 | Cma01g02011 | Cma-Chr1:12878049 | 2.43E-75 | transposed | |
Cma01g02011 | Cma-Chr1:12878049 | Cma03g00627 | Cma-Chr3:5435253 | 4.58E-161 | wgd | |
Cma01g02011 | Cma-Chr1:12878049 | Cma07g00387 | Cma-Chr7:1663930 | 1.90E-166 | wgd | |
Cma01g02011 | Cma-Chr1:12878049 | Cma09g00055 | Cma-Chr9:252777 | 2.53E-89 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma01g02011 | K21777 | - | csv:101223199 | 744.191 |