Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma02g00036 ATGGCAGCAGCTTCATCAATGGCTTTGTCCTCCCCATCTCTCGCCGGCCAAGCCGTGAAATTATCCCCCGCCGCTGCCTCCAACCTCCTCGGCGAGAGCCGTGTCACCATGAGGAAAACCGCTGGCAGGCCCAAGCCCGTCTCCTCCGGTAGCCCATGGTACGGCCCAGATCGTGTCAAGTACTTGGGCCCATTCTCCGGCGAGCCCCCCTCCTATCTTACCGGCGAGTTCCCCGGCGACTACGGCTGGGACACTGCTGGCCTCTCTGCCGACCCAGAGACCTTCGCCAAAAACCGTGAGCTGGAAGTGATCCACTCGAGGTGGGCCATGCTTGGGGCTCTTGGGTGCGTCTTCCCGGAGCTTCTGTCTCGCAACGGCGTGAAGTTCGGCGAGGCCGTGTGGTTCAAAGCCGGGTCTCAGATCTTCAGCGAGGGTGGGCTCGACTATTTGGGGAACCCGAGCTTGGTTCACGCGCAGAGCATTCTGGCGATCTGGGCTTGCCAGGTTGTGCTGATGGGAGCCGTGGAGGGGTACAGAATTGCGGGTGGGCCGCTGGGTGAGATCACGGACCCAATTTACCCAGGGGGGAGCTTCGACCCATTGGGGCTGGCGGACGACCCAGAGGCCTTCGCCGAGCTCAAAGTGAAGGAGCTGAAGAATGGAAGATTGGCAATGTTTTCGATGTTTGGATTCTTTGTGCAGGCAATTGTGACAGGGAAAGGACCTTTGGAGAACTTGGCTGACCATTTGGCTGACCCTGTTAACAACAACGCTTGGGCTTTTGCCACTAACTTTGTACCTGGAAAGTGA 810 59.01 MAAASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 269
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 192688 193497 + CmaCh02G000360.1 Cma02g00036 287787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma02g00036 269 Pfam Chlorophyll A-B binding protein 69 235 IPR022796 -
Cma02g00036 269 Gene3D Chlorophyll a/b binding protein domain 60 262 - -
Cma02g00036 269 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC 3 269 - -
Cma02g00036 269 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 3 269 IPR001344 GO:0009765|GO:0016020
Cma02g00036 269 SUPERFAMILY Chlorophyll a-b binding protein 52 266 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma02g00036 Cma20g00260 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g00036 Cma-Chr2:192688 Cma07g00128 Cma-Chr7:661812 0 dispersed
Cma01g00890 Cma-Chr1:5137054 Cma02g00036 Cma-Chr2:192688 1.43E-66 transposed
Cma02g00036 Cma-Chr2:192688 Cma20g00260 Cma-Chr20:1270014 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma02g00036 K08912 - csv:101213845 528.094