Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma02g00065 | ATGAAATTTGTAGAGCAGAGCTTGAAGCAACAGTCGGGACAGATATGCAAGACTATTGAGGTCGATGTAACTGATCACCATCGCAGTGCATCGTCGATGGTCGAATTGGAAGCTTCTGAAGATTGCGAGAGGGATGGACCGGATGGTGATGGCCTCTATATTCCTCCCCTCAACTTTTCCATGGTTGATAATGGAATTTTCCGCTCCGGCTTCCCTAATTCTGCTAACTTCTCCTTTCTCCAAACCCTAGGCCTCCGTTCCATTATATGTCTATGTCCGGAACCGTATCCGGAACACAACATGGAGTTTCTCAAGTATAACGGAATCAGATTGTATCAATTTGGAATCGAGAGCTATAAGGAGCCTTTTGTGAATATCCCAGATGATATGATTCGTGAAGCACTGAAAGTTGTCCTTGACGATAGAAATCATCCAATCCTCATACATTGCAAGAGAGGAAAGCATCGAACAGGTTGCCTTGTCGGATGCCTGAGAAAATTGCAGAGGTGGTGCCTCACTTCTGTGTTTGATGAGTACCAGAGGTTTGCAGCTGCAAAAGCAAGAATTTCAGACCAGAGGTTTATGGAATTGTTCGATATCTCCGACTTGAGGCATCTTCCCATGTCATTCTCATGCTCAAAGAGGTGA | 648 | 44.75 | MKFVEQSLKQQSGQICKTIEVDVTDHHRSASSMVELEASEDCERDGPDGDGLYIPPLNFSMVDNGIFRSGFPNSANFSFLQTLGLRSIICLCPEPYPEHNMEFLKYNGIRLYQFGIESYKEPFVNIPDDMIREALKVVLDDRNHPILIHCKRGKHRTGCLVGCLRKLQRWCLTSVFDEYQRFAAAKARISDQRFMELFDISDLRHLPMSFSCSKR | 215 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 304907 | 308002 | + | CmaCh02G000650.1 | Cma02g00065 | 287816 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma02g00065 | 215 | PRINTS | Plant and fungal dual specificity phosphatase signature | 53 | 70 | IPR020428 | GO:0016791 | |
Cma02g00065 | 215 | PRINTS | Plant and fungal dual specificity phosphatase signature | 126 | 140 | IPR020428 | GO:0016791 | |
Cma02g00065 | 215 | PRINTS | Plant and fungal dual specificity phosphatase signature | 109 | 123 | IPR020428 | GO:0016791 | |
Cma02g00065 | 215 | PRINTS | Plant and fungal dual specificity phosphatase signature | 90 | 103 | IPR020428 | GO:0016791 | |
Cma02g00065 | 215 | PANTHER | TYROSINE-PROTEIN PHOSPHATASE | 8 | 213 | - | - | |
Cma02g00065 | 215 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 121 | 161 | IPR000387 | GO:0016311|GO:0016791 | |
Cma02g00065 | 215 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 54 | 200 | IPR029021 | - | |
Cma02g00065 | 215 | CDD | PFA-DSP_Siw14 | 52 | 199 | - | - | |
Cma02g00065 | 215 | Pfam | Tyrosine phosphatase family | 53 | 202 | IPR004861 | - | |
Cma02g00065 | 215 | Gene3D | Protein tyrosine phosphatase superfamily | 53 | 202 | IPR029021 | - | |
Cma02g00065 | 215 | PANTHER | PHOSPHOTYROSINE PROTEIN PHOSPHATASES SUPERFAMILY PROTEIN ISOFORM 1 | 8 | 213 | - | - | |
Cma02g00065 | 215 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 148 | 158 | IPR016130 | GO:0016311|GO:0016791 | |
Cma02g00065 | 215 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 58 | 212 | IPR020422 | GO:0006470|GO:0008138 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma02g00065 | Cma20g00235 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma02g00065 | Cma-Chr2:304907 | Cma11g00940 | Cma-Chr11:4935931 | 3.92E-79 | dispersed | |
Cma11g01936 | Cma-Chr11:12737190 | Cma02g00065 | Cma-Chr2:304907 | 5.73E-103 | wgd | |
Cma19g01048 | Cma-Chr19:8861806 | Cma02g00065 | Cma-Chr2:304907 | 1.84E-84 | wgd | |
Cma02g00065 | Cma-Chr2:304907 | Cma20g00235 | Cma-Chr20:1119634 | 2.05E-136 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma02g00065 | K18045 | - | csv:101222170 | 370.163 |