Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma02g00095 | ATGGCGCCTCCAACCCTTGCTGGGTTCCTGGCCCTCGCCCTCTCTTTACTTGCTGCTATGGTTTCCTCTTCTGATGCCTACAAATTCTATGTCGGCGGCAGAGATGGCTGGGTTCCAAACCCTTCTGAGAACTTCAATCACTGGGCTGAGCGCAACCGGTTCCAAGTCAATGATACTCTTTATTTCAAGTATAAAAACGGGACGGATTCTGTGTTGGTTGTAAGCAAGGAAGATTATTTCTCTTGCAATACCAAAAACCCAGTAATTACCCTAAAAGATGGTGAATCAATCTTCAAATTTGGTCATTCGGGTCCGTTTTATTTCATAAGTGGAGACGCTGATAGGTGCCAGAAGGGTCAACGGCTCATTGTTGTGGTTCTTGCTGTGAGGCATAAACAGCATCTTGCTCCGTCGCCACAAGCTCCGACCCCGACTGCTCAGTCACCGGAAAACGCTGGTTCGCCGGAATCCGGCGTTGGATTCACAGCGCCGGTTCCAGCTCCAGCGAAGAGTTCTGCTTTTGGAGGGTCTGCCGCTAGTGAAGCTAGAAATGGCGATCGGAACTCATCGTCGGAATCTTCGCCGGCGGATGGGTTCCCCCGTGGCCGCTTGAAGAAGCTCCTCCAGCCAATTGGTGGTGAGAGTTCTCTTATTTATAATCATTTACAGAATACAGAAATAAGGTAA | 687 | 49.34 | MAPPTLAGFLALALSLLAAMVSSSDAYKFYVGGRDGWVPNPSENFNHWAERNRFQVNDTLYFKYKNGTDSVLVVSKEDYFSCNTKNPVITLKDGESIFKFGHSGPFYFISGDADRCQKGQRLIVVVLAVRHKQHLAPSPQAPTPTAQSPENAGSPESGVGFTAPVPAPAKSSAFGGSAASEARNGDRNSSSESSPADGFPRGRLKKLLQPIGGESSLIYNHLQNTEIR | 228 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 485515 | 488631 | + | CmaCh02G000950.1 | Cma02g00095 | 287846 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma02g00095 | 228 | MobiDBLite | consensus disorder prediction | 138 | 155 | - | - | |
Cma02g00095 | 228 | PANTHER | BLUE COPPER PROTEIN | 9 | 149 | IPR039391 | GO:0009055 | |
Cma02g00095 | 228 | CDD | OsENODL1_like | 27 | 127 | IPR041846 | - | |
Cma02g00095 | 228 | PANTHER | EARLY NODULIN-LIKE PROTEIN 2 | 9 | 149 | - | - | |
Cma02g00095 | 228 | MobiDBLite | consensus disorder prediction | 182 | 196 | - | - | |
Cma02g00095 | 228 | ProSiteProfiles | Phytocyanin domain profile. | 27 | 128 | IPR003245 | GO:0009055 | |
Cma02g00095 | 228 | Pfam | Plastocyanin-like domain | 37 | 120 | IPR003245 | GO:0009055 | |
Cma02g00095 | 228 | MobiDBLite | consensus disorder prediction | 135 | 205 | - | - | |
Cma02g00095 | 228 | SUPERFAMILY | Cupredoxins | 26 | 127 | IPR008972 | - | |
Cma02g00095 | 228 | Gene3D | - | 26 | 130 | IPR008972 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma02g00095 | Cma-Chr2:485515 | Cma09g00857 | Cma-Chr9:4202759 | 1.40E-47 | dispersed | |
Cma06g00591 | Cma-Chr6:2844950 | Cma02g00095 | Cma-Chr2:485515 | 2.03E-21 | dispersed | |
Cma02g00095 | Cma-Chr2:485515 | Cma04g00944 | Cma-Chr4:4849942 | 4.70E-35 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma02g00095 | - | - | bhj:120089248 | 216.083 |