Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma02g00095 ATGGCGCCTCCAACCCTTGCTGGGTTCCTGGCCCTCGCCCTCTCTTTACTTGCTGCTATGGTTTCCTCTTCTGATGCCTACAAATTCTATGTCGGCGGCAGAGATGGCTGGGTTCCAAACCCTTCTGAGAACTTCAATCACTGGGCTGAGCGCAACCGGTTCCAAGTCAATGATACTCTTTATTTCAAGTATAAAAACGGGACGGATTCTGTGTTGGTTGTAAGCAAGGAAGATTATTTCTCTTGCAATACCAAAAACCCAGTAATTACCCTAAAAGATGGTGAATCAATCTTCAAATTTGGTCATTCGGGTCCGTTTTATTTCATAAGTGGAGACGCTGATAGGTGCCAGAAGGGTCAACGGCTCATTGTTGTGGTTCTTGCTGTGAGGCATAAACAGCATCTTGCTCCGTCGCCACAAGCTCCGACCCCGACTGCTCAGTCACCGGAAAACGCTGGTTCGCCGGAATCCGGCGTTGGATTCACAGCGCCGGTTCCAGCTCCAGCGAAGAGTTCTGCTTTTGGAGGGTCTGCCGCTAGTGAAGCTAGAAATGGCGATCGGAACTCATCGTCGGAATCTTCGCCGGCGGATGGGTTCCCCCGTGGCCGCTTGAAGAAGCTCCTCCAGCCAATTGGTGGTGAGAGTTCTCTTATTTATAATCATTTACAGAATACAGAAATAAGGTAA 687 49.34 MAPPTLAGFLALALSLLAAMVSSSDAYKFYVGGRDGWVPNPSENFNHWAERNRFQVNDTLYFKYKNGTDSVLVVSKEDYFSCNTKNPVITLKDGESIFKFGHSGPFYFISGDADRCQKGQRLIVVVLAVRHKQHLAPSPQAPTPTAQSPENAGSPESGVGFTAPVPAPAKSSAFGGSAASEARNGDRNSSSESSPADGFPRGRLKKLLQPIGGESSLIYNHLQNTEIR 228
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 485515 488631 + CmaCh02G000950.1 Cma02g00095 287846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma02g00095 228 MobiDBLite consensus disorder prediction 138 155 - -
Cma02g00095 228 PANTHER BLUE COPPER PROTEIN 9 149 IPR039391 GO:0009055
Cma02g00095 228 CDD OsENODL1_like 27 127 IPR041846 -
Cma02g00095 228 PANTHER EARLY NODULIN-LIKE PROTEIN 2 9 149 - -
Cma02g00095 228 MobiDBLite consensus disorder prediction 182 196 - -
Cma02g00095 228 ProSiteProfiles Phytocyanin domain profile. 27 128 IPR003245 GO:0009055
Cma02g00095 228 Pfam Plastocyanin-like domain 37 120 IPR003245 GO:0009055
Cma02g00095 228 MobiDBLite consensus disorder prediction 135 205 - -
Cma02g00095 228 SUPERFAMILY Cupredoxins 26 127 IPR008972 -
Cma02g00095 228 Gene3D - 26 130 IPR008972 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g00095 Cma-Chr2:485515 Cma09g00857 Cma-Chr9:4202759 1.40E-47 dispersed
Cma06g00591 Cma-Chr6:2844950 Cma02g00095 Cma-Chr2:485515 2.03E-21 dispersed
Cma02g00095 Cma-Chr2:485515 Cma04g00944 Cma-Chr4:4849942 4.70E-35 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma02g00095 - - bhj:120089248 216.083