Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma02g00130 ATGGAAGATATTGCTGTGATATTCAGCAAGGCAGACACAGACAATTCAGGAAGTTTAGCCCTGCAAGAGTTTCAAGAAGCAGTAAAGGATATTTGTGAGAGGTACCCTCAAGTAGAGATCTATCTGAAGAAGAATAAGATGAAGAACTTTGCAGCCTTGTTGAAGAAGTCCCAATTGGACACACAGAGACAGTCGACCGAGCTCGATATCGAAAGCTTTACGTCCTTACTTTCCGAAGTCGATGCTCAGATGAAAAATCTGCCTGCTACTGCTCAAGTTGCTGCTCAACAAGGTGAGTATCTTGCTACCTGCTTCAACAAGATGGAACAATGTGAGAAGTACCCAGAAGGCCCTCTCCGATATAGAGGGACGGGGCGACATCGGTTTCGTCCCTTCAGGTACAAGCATTTTGGGCAGTTTGCTCCTCTTGGTGGAGAACAAACTGCAGCTCAACTACCTGGAGATTGGATTTCAATAGGTCATAGCAGCCAGTGGCTTTGGTACTCTGTGTATACAAGCAAGCTAGTAAGCTGGCGCACGAGGGTTCTGGTCCTATCAGACTGGGCTAGAAGATTCATATTTGGCAGGGATTCAAGCAGAATCTGA 606 46.04 MEDIAVIFSKADTDNSGSLALQEFQEAVKDICERYPQVEIYLKKNKMKNFAALLKKSQLDTQRQSTELDIESFTSLLSEVDAQMKNLPATAQVAAQQGEYLATCFNKMEQCEKYPEGPLRYRGTGRHRFRPFRYKHFGQFAPLGGEQTAAQLPGDWISIGHSSQWLWYSVYTSKLVSWRTRVLVLSDWARRFIFGRDSSRI 201
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 624970 626623 + CmaCh02G001300.1 Cma02g00130 287881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma02g00130 201 ProSiteProfiles EF-hand calcium-binding domain profile. 1 34 IPR002048 GO:0005509
Cma02g00130 201 PANTHER - 1 201 - -
Cma02g00130 201 SUPERFAMILY EF-hand 2 78 IPR011992 -
Cma02g00130 201 ProSitePatterns EF-hand calcium-binding domain. 12 24 IPR018247 -
Cma02g00130 201 PANTHER NADH DEHYDROGENASE 1 201 IPR045024 GO:0003954|GO:0006116
Cma02g00130 201 Gene3D - 40 200 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma02g00130 Cma19g00965 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g00130 Cma-Chr2:624970 Cma19g00965 Cma-Chr19:8488705 5.84E-93 dispersed
Cma02g00130 Cma-Chr2:624970 Cma13g00678 Cma-Chr13:6257337 1.98E-107 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma02g00130 K03885 - csv:101209855 371.318