Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma02g00145 ATGAGGGTTCACACAGAAATGGAATTGAGAAGACCTGGTTATGTGGTTGTATTTGTGATCCTCCTCAGCGCATTGGCAATTTCCAGTTCAGAGGCCAGAACGAAGACCGTCGAAATGGTTCTCACCACTGCCGGCGATTGCCATTTCGCCTCCTCGGAATTCGAACCATATATGGAAGAAAATCAGGCGTGCATGAAAGAATTGGGAGAGAGGGAATATGAATATGAAGATGAAGAATTGGTTGCTTGCATCCAGAAAGGGAACATGGATGAAGCTATAAGAATTCTGGATCCTGAGATGAAACATGAATTGTTGAATTGTTTAAGAAGGAGAAGTACGTTTTCTCGTGGATCTGAAGAAGCACGTCCTAACTTAATTGATGGGTTTAGAAGGTCAACTGAGTTCATCTCCGGAGGCTCCAATATTCACATCAGACGTACAATTCTATCATCCCAAGATTCACCACCATCAGGCCCTGCTGCAGCTCCATCCCCTTCATCAGAATCACCAAACAATTCTCCATCATCATCTCCCAGTAATGCTCCAATGTCATCCCCTACTCATGTCCAACCCAAGTCTCCATTGCCAAAATCGAAATCGAAATCGAAATCGAAATCGAAATCAAAACAGAAACCGAAAGAAGACGACACCGACACCGACTCCGACACCGACACTGGTAATTCGGATTCTACGGATTCAACAGATTCACCTTCAGCTTCTGCAGGTCGCTCACCAAGTCTTCCACGTGGTTCTCCCAAGCGTCGCCCTCCAAATACGGAGGAGGAAGAAAACCTGATGATTATAATTGCTGGCATTGTAGCAACTGGTGTGGCAGTTGTTTTTACTGTTGCCCTGCTTTTGTTCTGCAGTTGTAGGGATGAGGAAAGTGAGCCTGATCCAAAGTTTAGGCAAAGGGGTGAGAAGCCTCTTCTTGTATCTATGGGCGAAGTATCAGCAGGTTCTTCACTGAAGTCTTACAGCCATGGAAATTCAGCTACAAAACAGTTCGGTGCTGATAATGCAACGAAACCACCCTCTTTTGCTGGCAACTTGTCGGTGAATCCTGAAAATGTTACCTCAATGGCTGAGGCTCCAAGATTTGACGGTAAACCATCGGCAATGCCGCCTCTAAAACCCCCTCCTGGAAGATCAGAACCTCCGCCCCCTCCTCCACCAGCACCAGAACCAGAACCAGAACCAGCACCAGCACCAAAACCAGCACCAGCACAAGCGGCGGCGGCACCGGCAGCACCTCCACCGCCACCAGCAACTGCTCCTAGAGCTCCACCTCCTCCTCCCATGAAAGGTGCTCGACCCCCACCTGCCCCACCGGCGGGAATCCCTGGTAAATCTCAAGCAGTGCCTTTGGGGCCAAATCAGCGTGGAACCAGTGGCTCAAATACGGATTCGGATCCAGGAAGCCACAAGACCAAGTTAAAGCCATTCTTCTGGGATAAGGTTCTTGCCAATCCTGGTCAATCCATGGTCTGGCACGAGATTAGTGATGGATCTTTCCAATTCAACGAGGAGATGATGGAGTCTCTGTTTGGGTACAATCCTGCAGAAAATAACAAAGGCAACCGCAAGAAAGATTTAGCTTCAGATTCTTCCAATCAGTACATTCAAATCATCGACGCTAGGAAAGCTCAAAACCTTTCAATTCTCCTACGTGCATTGAATGTAACAACAGCAGAAGTTGTGGATTGCATTCAAGAAGGCACGCTCTCTGATAAATCAACAAATTATGTACCAGGAAATCCGGATCTTCCCGCAGAGCTTGTGCAGACATTGTTGAAGATGGCGCCAACAACAGAAGAGGAACTGAAACTGAGATTATTCTCAGGCGACCTTTCTCAGATCGGTCCGGCAGAACGGTTCCTCAAAGTGCTGGTGGAAACTCCTTTCGCTTTCAAACGATTAGAGTGTCTTCTCTTCATGATTTCAATGTCGGAAGACGTCGCTACCGTTAAAGAGTCATTCACAACTCTAGAGGTTGCTTGCAACAAACTCAAGAACAGCAGGCTATTTCTCAAGCTATTAGAAGCAGTTCTCAAAACTGGAAATCGAATGAACGACGGAACGTACCGTGGCGGTGCTCAGGCGTTTAAGCTCGACACGCTCTTGAAACTGGCGGATGTTAAAGGAACCGACGGCAAGACTACTTTCTTACATTTCGTCGTAACGGAGATTATTCGTTCGGAGGGCGTGAGAGCAGCCCGCTCTTGCAGAGAAAGCCAGAGTTTGTCCAGCATAGCCTCCGCCGATATTGTTTTGGATGACTTCACTGACGATTCGGCGGAAAATTATCGAAAATTAGGTCTTCAGGTCGTTTCTAGTTTGAGCACGGAGCTCGTGGACGTTAAAAGAGCGGCAGCCATAGATGCGGATGGGTTAACCAAGATGATAGCGAAACTCGGCCAGTCTCTGATGAAATCCAAAGCATTTATAAATGCCGAAATGAAGAATTTAGACGAAGACAGCAAATTCCGCCAATCGATATTGAAATTTTTGAAAGACGCAGAAACGGATATTACGTGGATTGCAGGGGAAGAAAAGAACATAATGGCGCTGGTGAAGAGCACGGCAGATTACTTCCATGGAAGTTCCGGAAAGGACGAAGGATTGCGATTGTTTACGGTCGTACGCGATTTCCTGATTATGCTAGACAAGACGTGTAAACAGGTTAAAGATGCAGCTGCAGCTGAAGCTGCAGCAGCGGCGGCAGCGGCAGTGGCAGCAGCGGCAACAAACCATGGGAAGAATTCCAAGAAAGAAACTCCGAAATTGTCGGCTACTTCTAATCAGAGATCAGAGCTACGGCAACGGCTATTCCCGGCGATTGTAGAACGATGGAAGGGCGAGGATTCAAGTTCTTCGGACGAGGAGGACGGCGACGGCGAGAGCTCATCTTCATCATCCTAG 2922 47.6 MRVHTEMELRRPGYVVVFVILLSALAISSSEARTKTVEMVLTTAGDCHFASSEFEPYMEENQACMKELGEREYEYEDEELVACIQKGNMDEAIRILDPEMKHELLNCLRRRSTFSRGSEEARPNLIDGFRRSTEFISGGSNIHIRRTILSSQDSPPSGPAAAPSPSSESPNNSPSSSPSNAPMSSPTHVQPKSPLPKSKSKSKSKSKSKQKPKEDDTDTDSDTDTGNSDSTDSTDSPSASAGRSPSLPRGSPKRRPPNTEEEENLMIIIAGIVATGVAVVFTVALLLFCSCRDEESEPDPKFRQRGEKPLLVSMGEVSAGSSLKSYSHGNSATKQFGADNATKPPSFAGNLSVNPENVTSMAEAPRFDGKPSAMPPLKPPPGRSEPPPPPPPAPEPEPEPAPAPKPAPAQAAAAPAAPPPPPATAPRAPPPPPMKGARPPPAPPAGIPGKSQAVPLGPNQRGTSGSNTDSDPGSHKTKLKPFFWDKVLANPGQSMVWHEISDGSFQFNEEMMESLFGYNPAENNKGNRKKDLASDSSNQYIQIIDARKAQNLSILLRALNVTTAEVVDCIQEGTLSDKSTNYVPGNPDLPAELVQTLLKMAPTTEEELKLRLFSGDLSQIGPAERFLKVLVETPFAFKRLECLLFMISMSEDVATVKESFTTLEVACNKLKNSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLADVKGTDGKTTFLHFVVTEIIRSEGVRAARSCRESQSLSSIASADIVLDDFTDDSAENYRKLGLQVVSSLSTELVDVKRAAAIDADGLTKMIAKLGQSLMKSKAFINAEMKNLDEDSKFRQSILKFLKDAETDITWIAGEEKNIMALVKSTADYFHGSSGKDEGLRLFTVVRDFLIMLDKTCKQVKDAAAAEAAAAAAAAVAAAATNHGKNSKKETPKLSATSNQRSELRQRLFPAIVERWKGEDSSSSDEEDGDGESSSSSS 973
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 691274 695311 - CmaCh02G001450.1 Cma02g00145 287896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma02g00145 973 MobiDBLite consensus disorder prediction 164 197 - -
Cma02g00145 973 Gene3D Formin, FH2 domain 488 928 IPR042201 -
Cma02g00145 973 MobiDBLite consensus disorder prediction 149 259 - -
Cma02g00145 973 SMART it6_source 469 903 IPR015425 -
Cma02g00145 973 MobiDBLite consensus disorder prediction 926 940 - -
Cma02g00145 973 MobiDBLite consensus disorder prediction 226 245 - -
Cma02g00145 973 SUPERFAMILY Formin homology 2 domain (FH2 domain) 538 911 - -
Cma02g00145 973 MobiDBLite consensus disorder prediction 372 448 - -
Cma02g00145 973 PANTHER FORMIN-RELATED 7 961 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Cma02g00145 973 MobiDBLite consensus disorder prediction 943 957 - -
Cma02g00145 973 Pfam Formin Homology 2 Domain 474 888 IPR015425 -
Cma02g00145 973 PANTHER FORMIN-LIKE PROTEIN 3 7 961 - -
Cma02g00145 973 MobiDBLite consensus disorder prediction 456 472 - -
Cma02g00145 973 MobiDBLite consensus disorder prediction 322 477 - -
Cma02g00145 973 MobiDBLite consensus disorder prediction 917 973 - -
Cma02g00145 973 MobiDBLite consensus disorder prediction 322 359 - -
Cma02g00145 973 ProSiteProfiles Formin homology-2 (FH2) domain profile. 469 914 IPR015425 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma02g00145 Cma20g00639 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g00145 Cma-Chr2:691274 Cma02g00531 Cma-Chr2:2928979 3.16E-115 dispersed
Cma01g01155 Cma-Chr1:8438441 Cma02g00145 Cma-Chr2:691274 8.78E-168 wgd
Cma02g00145 Cma-Chr2:691274 Cma20g00639 Cma-Chr20:2975163 0 wgd
Cma02g00145 Cma-Chr2:691274 Cma09g00921 Cma-Chr9:4588568 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma02g00145 - - cmo:103495929 753.436