Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma02g00155 | ATGAAAATGAGGCAACTTACCTCTTTGGTGTTGGCCACTATAGTTTGTCTGATAGGCCTCATAGGCTCCACTCAAGCTCAGTTGCAGCTTGGTTTCTATGCCAATAGCTGCCCAAACGCTGAGAAGATTGTGCTGGACTTTGTTCATCAGCATATCCATAATGCTCCTTCGCTGGCGGCAACTTTCATTAGAATGCACTTCCATGATTGCTTCGTCAGGGGTTGTGATGCATCGGTTCTTATTAACACCACTTCAAATAACCAAGCTGAGAAGGATGCTCCTCCAAATCGAACACTCAGAGGTTTTGACTTCATTGATAGAGTTAAAAGCTTACTTGAAGCTGAATGCCCTGGAGTTGTGTCTTGTGCTGATGTTCTTTCCTTGGTTACTAGAGATACCATTGTAGCCACGGGAGGTCCTTACTGGGAAGTTCCAACAGGGCGAAGGGATGGAGTGATCTCAAGGTCATCAGAAGCCACGGCCAACATTCCTCCTCCATCTTCAAACTTCTCAAGACTCCAAACCCTTTTCGGAAACCAAGGCCTTGATGTTAAGGACTTGGTATTACTATCTGGCGCACACACAATCGGCATAGCCCATTGCTCATCATTCCGCAACCGACTCTACAACTTCACCGGCGTCGGTAACCAAGACCCCTCTCTGGACCCAAGATACGCCGCTAATCTCAAGGCCAACAAATGCAAAACTCCCACCGACAACAGCAAAGTGGAAATGGACCCAGGGAGTCGTAAAACATTTGACCTTAGCTACTACTCTCTTCTTCTCAAACGAAGGGGCCTTTTCCAATCCGATTCTGCTCTCACTAAAGACTTAACTTCATTGGGTCTAGTTCAGAAACTTGTCGAAGGACCCATTGAAGAGTTCTTCGCTGAATTTGCTGCAGCCATGGAGAAAATGGGTCGGATTAACGTGAAGACTGGTACTGAAGGCGAAATCAGAAAGCGATGCGGCGTGGTGAATAGTTAA | 987 | 46.61 | MKMRQLTSLVLATIVCLIGLIGSTQAQLQLGFYANSCPNAEKIVLDFVHQHIHNAPSLAATFIRMHFHDCFVRGCDASVLINTTSNNQAEKDAPPNRTLRGFDFIDRVKSLLEAECPGVVSCADVLSLVTRDTIVATGGPYWEVPTGRRDGVISRSSEATANIPPPSSNFSRLQTLFGNQGLDVKDLVLLSGAHTIGIAHCSSFRNRLYNFTGVGNQDPSLDPRYAANLKANKCKTPTDNSKVEMDPGSRKTFDLSYYSLLLKRRGLFQSDSALTKDLTSLGLVQKLVEGPIEEFFAEFAAAMEKMGRINVKTGTEGEIRKRCGVVNS | 328 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 726827 | 728666 | - | CmaCh02G001550.1 | Cma02g00155 | 287906 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma02g00155 | 328 | ProSitePatterns | Peroxidases active site signature. | 59 | 70 | IPR019794 | GO:0004601 | |
Cma02g00155 | 328 | Gene3D | - | 32 | 327 | - | - | |
Cma02g00155 | 328 | PRINTS | Haem peroxidase superfamily signature | 59 | 73 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma02g00155 | 328 | PRINTS | Haem peroxidase superfamily signature | 120 | 137 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma02g00155 | 328 | PRINTS | Haem peroxidase superfamily signature | 138 | 150 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma02g00155 | 328 | PRINTS | Haem peroxidase superfamily signature | 186 | 201 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma02g00155 | 328 | PRINTS | Haem peroxidase superfamily signature | 246 | 261 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma02g00155 | 328 | CDD | secretory_peroxidase | 27 | 326 | IPR033905 | GO:0004601|GO:0042744 | |
Cma02g00155 | 328 | Pfam | Peroxidase | 46 | 287 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma02g00155 | 328 | PANTHER | PEROXIDASE 25-RELATED | 13 | 327 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma02g00155 | 328 | ProSiteProfiles | Plant heme peroxidase family profile. | 27 | 327 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma02g00155 | 328 | SUPERFAMILY | Heme-dependent peroxidases | 27 | 327 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cma02g00155 | 328 | PANTHER | PEROXIDASE | 13 | 327 | - | - | |
Cma02g00155 | 328 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 186 | 196 | IPR019793 | - | |
Cma02g00155 | 328 | Gene3D | Peroxidase, domain 2 | 164 | 306 | - | - | |
Cma02g00155 | 328 | PRINTS | Plant peroxidase signature | 37 | 56 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma02g00155 | 328 | PRINTS | Plant peroxidase signature | 61 | 81 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma02g00155 | 328 | PRINTS | Plant peroxidase signature | 100 | 113 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma02g00155 | 328 | PRINTS | Plant peroxidase signature | 119 | 129 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma02g00155 | 328 | PRINTS | Plant peroxidase signature | 138 | 153 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma02g00155 | 328 | PRINTS | Plant peroxidase signature | 185 | 197 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma02g00155 | 328 | PRINTS | Plant peroxidase signature | 244 | 259 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma02g00155 | 328 | PRINTS | Plant peroxidase signature | 260 | 277 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma02g00155 | 328 | PRINTS | Plant peroxidase signature | 301 | 314 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma02g00155 | Cma11g01838 | CCT | |
Cma02g00155 | Cma11g01838 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma02g00155 | Cma-Chr2:726827 | Cma11g01838 | Cma-Chr11:12266469 | 3.14E-171 | dispersed | |
Cma11g01837 | Cma-Chr11:12261525 | Cma02g00155 | Cma-Chr2:726827 | 1.46E-120 | wgd | |
Cma02g00155 | Cma-Chr2:726827 | Cma20g00633 | Cma-Chr20:2948709 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma02g00155 | K00430 | - | csv:101213629 | 568.54 |