Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma02g00155 ATGAAAATGAGGCAACTTACCTCTTTGGTGTTGGCCACTATAGTTTGTCTGATAGGCCTCATAGGCTCCACTCAAGCTCAGTTGCAGCTTGGTTTCTATGCCAATAGCTGCCCAAACGCTGAGAAGATTGTGCTGGACTTTGTTCATCAGCATATCCATAATGCTCCTTCGCTGGCGGCAACTTTCATTAGAATGCACTTCCATGATTGCTTCGTCAGGGGTTGTGATGCATCGGTTCTTATTAACACCACTTCAAATAACCAAGCTGAGAAGGATGCTCCTCCAAATCGAACACTCAGAGGTTTTGACTTCATTGATAGAGTTAAAAGCTTACTTGAAGCTGAATGCCCTGGAGTTGTGTCTTGTGCTGATGTTCTTTCCTTGGTTACTAGAGATACCATTGTAGCCACGGGAGGTCCTTACTGGGAAGTTCCAACAGGGCGAAGGGATGGAGTGATCTCAAGGTCATCAGAAGCCACGGCCAACATTCCTCCTCCATCTTCAAACTTCTCAAGACTCCAAACCCTTTTCGGAAACCAAGGCCTTGATGTTAAGGACTTGGTATTACTATCTGGCGCACACACAATCGGCATAGCCCATTGCTCATCATTCCGCAACCGACTCTACAACTTCACCGGCGTCGGTAACCAAGACCCCTCTCTGGACCCAAGATACGCCGCTAATCTCAAGGCCAACAAATGCAAAACTCCCACCGACAACAGCAAAGTGGAAATGGACCCAGGGAGTCGTAAAACATTTGACCTTAGCTACTACTCTCTTCTTCTCAAACGAAGGGGCCTTTTCCAATCCGATTCTGCTCTCACTAAAGACTTAACTTCATTGGGTCTAGTTCAGAAACTTGTCGAAGGACCCATTGAAGAGTTCTTCGCTGAATTTGCTGCAGCCATGGAGAAAATGGGTCGGATTAACGTGAAGACTGGTACTGAAGGCGAAATCAGAAAGCGATGCGGCGTGGTGAATAGTTAA 987 46.61 MKMRQLTSLVLATIVCLIGLIGSTQAQLQLGFYANSCPNAEKIVLDFVHQHIHNAPSLAATFIRMHFHDCFVRGCDASVLINTTSNNQAEKDAPPNRTLRGFDFIDRVKSLLEAECPGVVSCADVLSLVTRDTIVATGGPYWEVPTGRRDGVISRSSEATANIPPPSSNFSRLQTLFGNQGLDVKDLVLLSGAHTIGIAHCSSFRNRLYNFTGVGNQDPSLDPRYAANLKANKCKTPTDNSKVEMDPGSRKTFDLSYYSLLLKRRGLFQSDSALTKDLTSLGLVQKLVEGPIEEFFAEFAAAMEKMGRINVKTGTEGEIRKRCGVVNS 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 726827 728666 - CmaCh02G001550.1 Cma02g00155 287906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma02g00155 328 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Cma02g00155 328 Gene3D - 32 327 - -
Cma02g00155 328 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma02g00155 328 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma02g00155 328 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma02g00155 328 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma02g00155 328 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma02g00155 328 CDD secretory_peroxidase 27 326 IPR033905 GO:0004601|GO:0042744
Cma02g00155 328 Pfam Peroxidase 46 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma02g00155 328 PANTHER PEROXIDASE 25-RELATED 13 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g00155 328 ProSiteProfiles Plant heme peroxidase family profile. 27 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma02g00155 328 SUPERFAMILY Heme-dependent peroxidases 27 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cma02g00155 328 PANTHER PEROXIDASE 13 327 - -
Cma02g00155 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Cma02g00155 328 Gene3D Peroxidase, domain 2 164 306 - -
Cma02g00155 328 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g00155 328 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g00155 328 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g00155 328 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g00155 328 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g00155 328 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g00155 328 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g00155 328 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g00155 328 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma02g00155 Cma11g01838 CCT
Cma02g00155 Cma11g01838 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g00155 Cma-Chr2:726827 Cma11g01838 Cma-Chr11:12266469 3.14E-171 dispersed
Cma11g01837 Cma-Chr11:12261525 Cma02g00155 Cma-Chr2:726827 1.46E-120 wgd
Cma02g00155 Cma-Chr2:726827 Cma20g00633 Cma-Chr20:2948709 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma02g00155 K00430 - csv:101213629 568.54